RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 SIL1Q9H173 461 aa18.86■□□□□ 0.61
SNIP1-202ENST00000468040 WWC3Q9ULE0 1092 aa18.86■□□□□ 0.61
SNIP1-202ENST00000468040 NOP58Q9Y2X3 529 aaKnown RBP18.86■□□□□ 0.61
SNIP1-202ENST00000468040 C21orf2O43822 256 aa18.85■□□□□ 0.61
SNIP1-202ENST00000468040 G3BP1Q13283 466 aaKnown RBP eCLIP18.85■□□□□ 0.61
SNIP1-202ENST00000468040 CCDC93Q567U6 631 aa18.85■□□□□ 0.61
SNIP1-202ENST00000468040 PUS3Q9BZE2 481 aaKnown RBP18.85■□□□□ 0.61
SNIP1-202ENST00000468040 ANKRD2Q9GZV1 360 aa18.85■□□□□ 0.61
SNIP1-202ENST00000468040 RWDD1Q9H446 243 aaPredicted RBP18.85■□□□□ 0.61
SNIP1-202ENST00000468040 MINPP1Q9UNW1 487 aa18.85■□□□□ 0.61
SNIP1-202ENST00000468040 RIPOR2Q9Y4F9 1068 aa18.85■□□□□ 0.61
SNIP1-202ENST00000468040 ARFGEF1Q9Y6D6 1849 aa18.85■□□□□ 0.61
SNIP1-202ENST00000468040 OS9Q13438 667 aaPredicted RBP18.84■□□□□ 0.61
SNIP1-202ENST00000468040 LRRC24Q50LG9 513 aa18.84■□□□□ 0.61
SNIP1-202ENST00000468040 RTKN2Q8IZC4 609 aa18.84■□□□□ 0.61
SNIP1-202ENST00000468040 CHRNDQ07001 517 aa18.83■□□□□ 0.6
SNIP1-202ENST00000468040 METTL24Q5JXM2 366 aa18.83■□□□□ 0.6
SNIP1-202ENST00000468040 ATG9AQ7Z3C6 839 aa18.83■□□□□ 0.6
SNIP1-202ENST00000468040 ERC1Q8IUD2 1116 aa18.83■□□□□ 0.6
SNIP1-202ENST00000468040 ZNF219Q9P2Y4 722 aaPredicted RBP18.83■□□□□ 0.6
SNIP1-202ENST00000468040 XDHP47989 1333 aa18.82■□□□□ 0.6
SNIP1-202ENST00000468040 DCTPP1Q9H773 170 aa18.82■□□□□ 0.6
SNIP1-202ENST00000468040 PODXL2Q9NZ53 605 aa18.82■□□□□ 0.6
SNIP1-202ENST00000468040 ANKIB1Q9P2G1 1089 aa18.82■□□□□ 0.6
SNIP1-202ENST00000468040 NSFL1CQ9UNZ2 370 aaKnown RBP18.82■□□□□ 0.6
SNIP1-202ENST00000468040 EXOC6BQ9Y2D4 811 aa18.82■□□□□ 0.6
SNIP1-202ENST00000468040 SRCAPQ6ZRS2 3230 aa18.81■□□□□ 0.6
SNIP1-202ENST00000468040 RAB11FIP3O75154 756 aa18.81■□□□□ 0.6
SNIP1-202ENST00000468040 GPSM2P81274 684 aa18.81■□□□□ 0.6
SNIP1-202ENST00000468040 DPP8Q6V1X1 898 aaPredicted RBP18.81■□□□□ 0.6
SNIP1-202ENST00000468040 PELP1Q8IZL8 1130 aaKnown RBP18.81■□□□□ 0.6
SNIP1-202ENST00000468040 MPNDQ8N594 471 aa18.81■□□□□ 0.6
SNIP1-202ENST00000468040 GCC1Q96CN9 775 aa18.81■□□□□ 0.6
SNIP1-202ENST00000468040 CEP126Q9P2H0 1117 aa18.81■□□□□ 0.6
SNIP1-202ENST00000468040 PDE8BO95263 885 aa18.8■□□□□ 0.6
SNIP1-202ENST00000468040 GPR162Q16538 588 aa18.8■□□□□ 0.6
SNIP1-202ENST00000468040 OLFM4Q6UX06 510 aa18.8■□□□□ 0.6
SNIP1-202ENST00000468040 SNED1Q8TER0 1413 aa18.8■□□□□ 0.6
SNIP1-202ENST00000468040 A0A1B0GUL6 1792 aa18.8■□□□□ 0.6
SNIP1-202ENST00000468040 LTBP1Q14766 1721 aa18.8■□□□□ 0.6
SNIP1-202ENST00000468040 YBX3P16989 372 aaKnown RBP eCLIP18.79■□□□□ 0.6
SNIP1-202ENST00000468040 ATP2B4P23634 1241 aa18.79■□□□□ 0.6
SNIP1-202ENST00000468040 KCNJ4P48050 445 aa18.79■□□□□ 0.6
SNIP1-202ENST00000468040 VGLL2Q8N8G2 317 aa18.79■□□□□ 0.6
SNIP1-202ENST00000468040 SUPT20HQ8NEM7 779 aa18.79■□□□□ 0.6
SNIP1-202ENST00000468040 KIF1BPQ96EK5 621 aa18.79■□□□□ 0.6
SNIP1-202ENST00000468040 GGA1Q9UJY5 639 aa18.79■□□□□ 0.6
SNIP1-202ENST00000468040 LEMD3Q9Y2U8 911 aa18.79■□□□□ 0.6
SNIP1-202ENST00000468040 TAF5LO75529 589 aa18.78■□□□□ 0.6
SNIP1-202ENST00000468040 SASH1O94885 1247 aa18.78■□□□□ 0.6
SNIP1-202ENST00000468040 IGHDP01880 384 aa18.78■□□□□ 0.6
SNIP1-202ENST00000468040 PUM3Q15397 648 aaKnown RBP18.78■□□□□ 0.6
SNIP1-202ENST00000468040 SLC51AQ86UW1 340 aa18.78■□□□□ 0.6
SNIP1-202ENST00000468040 HELBQ8NG08 1087 aaPredicted RBP18.78■□□□□ 0.6
SNIP1-202ENST00000468040 PSMD1Q99460 953 aa18.78■□□□□ 0.6
SNIP1-202ENST00000468040 RTFDC1Q9BY42 306 aaPredicted RBP18.78■□□□□ 0.6
SNIP1-202ENST00000468040 AKAP2Q9Y2D5 859 aa18.78■□□□□ 0.6
SNIP1-202ENST00000468040 GRIN3BO60391 1043 aa18.77■□□□□ 0.6
SNIP1-202ENST00000468040 UFL1O94874 794 aa18.77■□□□□ 0.6
SNIP1-202ENST00000468040 FKBP4Q02790 459 aaKnown RBP eCLIP18.77■□□□□ 0.6
SNIP1-202ENST00000468040 TFCP2Q12800 502 aa18.77■□□□□ 0.6
SNIP1-202ENST00000468040 UBE4AQ14139 1066 aa18.77■□□□□ 0.6
SNIP1-202ENST00000468040 TBC1D16Q8TBP0 767 aa18.77■□□□□ 0.6
SNIP1-202ENST00000468040 RHPN1Q8TCX5 695 aa18.77■□□□□ 0.6
SNIP1-202ENST00000468040 CCDC136Q96JN2 1154 aa18.77■□□□□ 0.6
SNIP1-202ENST00000468040 TAOK3Q9H2K8 898 aa18.77■□□□□ 0.6
SNIP1-202ENST00000468040 PPP4R2Q9NY27 417 aa18.77■□□□□ 0.6
SNIP1-202ENST00000468040 DUOX1Q9NRD9 1551 aa18.76■□□□□ 0.59
SNIP1-202ENST00000468040 ZNF804BA4D1E1 1349 aa18.76■□□□□ 0.59
SNIP1-202ENST00000468040 LTBP3Q9NS15 1303 aa18.76■□□□□ 0.59
SNIP1-202ENST00000468040 FER1L6Q2WGJ9 1857 aa18.76■□□□□ 0.59
SNIP1-202ENST00000468040 DCAF8L1A6NGE4 600 aa18.76■□□□□ 0.59
SNIP1-202ENST00000468040 C6orf229H3BNL8 230 aa18.76■□□□□ 0.59
SNIP1-202ENST00000468040 APBB1O00213 710 aa18.76■□□□□ 0.59
SNIP1-202ENST00000468040 SMC5Q8IY18 1101 aa18.76■□□□□ 0.59
SNIP1-202ENST00000468040 EYA3Q99504 573 aa18.76■□□□□ 0.59
SNIP1-202ENST00000468040 LRRCC1Q9C099 1032 aa18.76■□□□□ 0.59
SNIP1-202ENST00000468040 GPR108Q9NPR9 543 aa18.76■□□□□ 0.59
SNIP1-202ENST00000468040 ATP2B3Q16720 1220 aa18.75■□□□□ 0.59
SNIP1-202ENST00000468040 ARHGAP27Q6ZUM4 889 aa18.75■□□□□ 0.59
SNIP1-202ENST00000468040 LPIN2Q92539 896 aa18.75■□□□□ 0.59
SNIP1-202ENST00000468040 ZBTB47Q9UFB7 747 aaPredicted RBP18.75■□□□□ 0.59
SNIP1-202ENST00000468040 POLLQ9UGP5 575 aa18.75■□□□□ 0.59
SNIP1-202ENST00000468040 NFKBIEO00221 500 aa18.74■□□□□ 0.59
SNIP1-202ENST00000468040 IFIT1P09914 478 aaKnown RBP18.74■□□□□ 0.59
SNIP1-202ENST00000468040 SLC5A1P13866 664 aa18.74■□□□□ 0.59
SNIP1-202ENST00000468040 CLASRPQ8N2M8 674 aaKnown RBP18.74■□□□□ 0.59
SNIP1-202ENST00000468040 VPS33BQ9H267 617 aa18.74■□□□□ 0.59
SNIP1-202ENST00000468040 ZNF609O15014 1411 aa18.74■□□□□ 0.59
SNIP1-202ENST00000468040 MED23Q9ULK4 1368 aa18.73■□□□□ 0.59
SNIP1-202ENST00000468040 FGFR2P21802 821 aa18.73■□□□□ 0.59
SNIP1-202ENST00000468040 CENPQQ7L2Z9 268 aaPredicted RBP18.73■□□□□ 0.59
SNIP1-202ENST00000468040 A0A1B0GUL7 405 aa18.72■□□□□ 0.59
SNIP1-202ENST00000468040 WASHC4Q2M389 1173 aa18.72■□□□□ 0.59
SNIP1-202ENST00000468040 TNNI3KQ59H18 835 aa18.72■□□□□ 0.59
SNIP1-202ENST00000468040 C15orf52Q6ZUT6 534 aaKnown RBP18.72■□□□□ 0.59
SNIP1-202ENST00000468040 ZC3H12CQ9C0D7 883 aaKnown RBP18.72■□□□□ 0.59
SNIP1-202ENST00000468040 IL1RAPL2Q9NP60 686 aa18.72■□□□□ 0.59
SNIP1-202ENST00000468040 FPGT-TNNI3KV9GXZ4 949 aa18.72■□□□□ 0.59
SNIP1-202ENST00000468040 SNAP23O00161 211 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms