RNA–Protein interactions for RNA: ENST00000467152.1

PDE6B-206, Transcript of phosphodiesterase 6B, humanhuman

TSL 1 (best)

Gene PDE6B, Length 545 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-206ENST00000467152 ALDH1L1O75891 902 aa23.57■■□□□ 1.36
PDE6B-206ENST00000467152 SP8Q8IXZ3 490 aa23.57■■□□□ 1.36
PDE6B-206ENST00000467152 ABT1Q9ULW3 272 aaKnown RBP23.57■■□□□ 1.36
PDE6B-206ENST00000467152 CELF1Q92879 486 aaKnown RBP23.56■■□□□ 1.36
PDE6B-206ENST00000467152 PLA2G12BQ9BX93 195 aa23.56■■□□□ 1.36
PDE6B-206ENST00000467152 RTFDC1Q9BY42 306 aaPredicted RBP23.56■■□□□ 1.36
PDE6B-206ENST00000467152 SRCIN1Q9C0H9 1055 aa23.56■■□□□ 1.36
PDE6B-206ENST00000467152 EPS15P42566 896 aa23.55■■□□□ 1.36
PDE6B-206ENST00000467152 MAP2K1Q02750 393 aaPredicted RBP23.55■■□□□ 1.36
PDE6B-206ENST00000467152 CCDC152Q4G0S7 254 aa23.55■■□□□ 1.36
PDE6B-206ENST00000467152 TTLL11Q8NHH1 800 aa23.55■■□□□ 1.36
PDE6B-206ENST00000467152 SEC31BQ9NQW1 1179 aa23.55■■□□□ 1.36
PDE6B-206ENST00000467152 NOB1Q9ULX3 412 aaKnown RBP23.55■■□□□ 1.36
PDE6B-206ENST00000467152 WDR33Q9C0J8 1336 aaKnown RBP23.55■■□□□ 1.36
PDE6B-206ENST00000467152 CTSWP56202 376 aa23.54■■□□□ 1.36
PDE6B-206ENST00000467152 RPS8P62241 208 aaKnown RBP23.54■■□□□ 1.36
PDE6B-206ENST00000467152 AOC3Q16853 763 aa23.54■■□□□ 1.36
PDE6B-206ENST00000467152 CCDC85AQ96PX6 553 aaPredicted RBP23.54■■□□□ 1.36
PDE6B-206ENST00000467152 ZNRF3Q9ULT6 936 aa23.54■■□□□ 1.36
PDE6B-206ENST00000467152 TMC4Q7Z404 712 aa23.53■■□□□ 1.36
PDE6B-206ENST00000467152 ADARB2Q9NS39 739 aaKnown RBP23.53■■□□□ 1.36
PDE6B-206ENST00000467152 GPRC5DQ9NZD1 345 aa23.53■■□□□ 1.36
PDE6B-206ENST00000467152 DUOX1Q9NRD9 1551 aa23.52■■□□□ 1.36
PDE6B-206ENST00000467152 ECE1P42892 770 aa23.52■■□□□ 1.36
PDE6B-206ENST00000467152 DPP8Q6V1X1 898 aaPredicted RBP23.52■■□□□ 1.36
PDE6B-206ENST00000467152 GRM8O00222 908 aa23.51■■□□□ 1.35
PDE6B-206ENST00000467152 CSF1RP07333 972 aa23.51■■□□□ 1.35
PDE6B-206ENST00000467152 KIAA2012Q0VF49 1180 aa23.5■■□□□ 1.35
PDE6B-206ENST00000467152 MPNDQ8N594 471 aa23.5■■□□□ 1.35
PDE6B-206ENST00000467152 C9orf78Q9NZ63 289 aaPredicted RBP23.5■■□□□ 1.35
PDE6B-206ENST00000467152 COL4A1P02462 1669 aa23.49■■□□□ 1.35
PDE6B-206ENST00000467152 BCAR3O75815 825 aa23.49■■□□□ 1.35
PDE6B-206ENST00000467152 FOXO4P98177 505 aa23.49■■□□□ 1.35
PDE6B-206ENST00000467152 CXCL9Q07325 125 aa23.49■■□□□ 1.35
PDE6B-206ENST00000467152 GREM2Q9H772 168 aa23.49■■□□□ 1.35
PDE6B-206ENST00000467152 LBX1P52954 281 aa23.48■■□□□ 1.35
PDE6B-206ENST00000467152 ARHGAP45Q92619 1136 aa23.48■■□□□ 1.35
PDE6B-206ENST00000467152 CAPNS2Q96L46 248 aa23.48■■□□□ 1.35
PDE6B-206ENST00000467152 API5Q9BZZ5 524 aaKnown RBP23.48■■□□□ 1.35
PDE6B-206ENST00000467152 RTL9Q8NET4 1388 aa23.48■■□□□ 1.35
PDE6B-206ENST00000467152 HSPA8P11142 646 aaKnown RBP23.47■■□□□ 1.35
PDE6B-206ENST00000467152 TNIP1Q15025 636 aa23.47■■□□□ 1.35
PDE6B-206ENST00000467152 EPHA10Q5JZY3 1008 aa23.47■■□□□ 1.35
PDE6B-206ENST00000467152 CIAPIN1Q6FI81 312 aa23.47■■□□□ 1.35
PDE6B-206ENST00000467152 UTYO14607 1347 aa23.47■■□□□ 1.35
PDE6B-206ENST00000467152 NBPF7P0C2Y1 421 aaPredicted RBP23.46■■□□□ 1.35
PDE6B-206ENST00000467152 GMPSP49915 693 aaPredicted RBP23.46■■□□□ 1.35
PDE6B-206ENST00000467152 ANKRD18AQ8IVF6 992 aa23.46■■□□□ 1.35
PDE6B-206ENST00000467152 USP44Q9H0E7 712 aa23.46■■□□□ 1.35
PDE6B-206ENST00000467152 TLL2Q9Y6L7 1015 aa23.46■■□□□ 1.35
PDE6B-206ENST00000467152 MYH3P11055 1940 aa23.45■■□□□ 1.35
PDE6B-206ENST00000467152 PAXIP1Q6ZW49 1069 aaPredicted RBP23.45■■□□□ 1.34
PDE6B-206ENST00000467152 ZC3H15Q8WU90 426 aaKnown RBP23.45■■□□□ 1.34
PDE6B-206ENST00000467152 KAZALD1Q96I82 304 aa23.45■■□□□ 1.34
PDE6B-206ENST00000467152 CDC5LQ99459 802 aaKnown RBP23.45■■□□□ 1.34
PDE6B-206ENST00000467152 BEGAINQ9BUH8 593 aa23.45■■□□□ 1.34
PDE6B-206ENST00000467152 KIF16BQ96L93 1317 aa23.44■■□□□ 1.34
PDE6B-206ENST00000467152 TRAF5O00463 557 aa23.44■■□□□ 1.34
PDE6B-206ENST00000467152 GPSM2P81274 684 aa23.44■■□□□ 1.34
PDE6B-206ENST00000467152 FAM161AQ3B820 660 aa23.44■■□□□ 1.34
PDE6B-206ENST00000467152 CST9Q5W186 159 aa23.44■■□□□ 1.34
PDE6B-206ENST00000467152 SUCLG2Q96I99 432 aa23.44■■□□□ 1.34
PDE6B-206ENST00000467152 IPO8O15397 1037 aaKnown RBP23.43■■□□□ 1.34
PDE6B-206ENST00000467152 ITGA6P23229 1130 aa23.43■■□□□ 1.34
PDE6B-206ENST00000467152 CCT4P50991 539 aaKnown RBP23.43■■□□□ 1.34
PDE6B-206ENST00000467152 FMR1Q06787 632 aaKnown RBP eCLIP23.43■■□□□ 1.34
PDE6B-206ENST00000467152 LMBR1LQ6UX01 489 aa23.43■■□□□ 1.34
PDE6B-206ENST00000467152 PGAP2Q9UHJ9 254 aa23.43■■□□□ 1.34
PDE6B-206ENST00000467152 NSFL1CQ9UNZ2 370 aaKnown RBP23.43■■□□□ 1.34
PDE6B-206ENST00000467152 HHIPL1Q96JK4 782 aa23.42■■□□□ 1.34
PDE6B-206ENST00000467152 GPR101Q96P66 508 aaPredicted RBP23.42■■□□□ 1.34
PDE6B-206ENST00000467152 BSDC1Q9NW68 430 aaPredicted RBP23.42■■□□□ 1.34
PDE6B-206ENST00000467152 PSME4Q14997 1843 aa23.42■■□□□ 1.34
PDE6B-206ENST00000467152 MAP2K2P36507 400 aa23.41■■□□□ 1.34
PDE6B-206ENST00000467152 CYP4F22Q6NT55 531 aa23.41■■□□□ 1.34
PDE6B-206ENST00000467152 PODXL2Q9NZ53 605 aa23.41■■□□□ 1.34
PDE6B-206ENST00000467152 POLLQ9UGP5 575 aa23.41■■□□□ 1.34
PDE6B-206ENST00000467152 POLR2AP24928 1970 aaKnown RBP23.4■■□□□ 1.34
PDE6B-206ENST00000467152 RAD17O75943 681 aa23.4■■□□□ 1.34
PDE6B-206ENST00000467152 ATF7IPQ6VMQ6 1270 aa23.4■■□□□ 1.34
PDE6B-206ENST00000467152 SAPCD2Q86UD0 394 aa23.4■■□□□ 1.34
PDE6B-206ENST00000467152 FRAT1Q92837 279 aaPredicted RBP23.4■■□□□ 1.34
PDE6B-206ENST00000467152 TNNQ9UQP3 1299 aa23.4■■□□□ 1.34
PDE6B-206ENST00000467152 ANKRD18BA2A2Z9 1011 aa23.39■■□□□ 1.33
PDE6B-206ENST00000467152 CELF2O95319 508 aaKnown RBP23.39■■□□□ 1.33
PDE6B-206ENST00000467152 TRIM27P14373 513 aa23.39■■□□□ 1.33
PDE6B-206ENST00000467152 INTS3Q68E01 1043 aaKnown RBP23.39■■□□□ 1.33
PDE6B-206ENST00000467152 TBC1D16Q8TBP0 767 aa23.39■■□□□ 1.33
PDE6B-206ENST00000467152 MINPP1Q9UNW1 487 aa23.39■■□□□ 1.33
PDE6B-206ENST00000467152 YDJCA8MPS7 323 aa23.38■■□□□ 1.33
PDE6B-206ENST00000467152 C6orf229H3BNL8 230 aa23.38■■□□□ 1.33
PDE6B-206ENST00000467152 CA12O43570 354 aa23.38■■□□□ 1.33
PDE6B-206ENST00000467152 IGHMBP2P38935 993 aaKnown RBP23.38■■□□□ 1.33
PDE6B-206ENST00000467152 GRM1Q13255 1194 aa23.38■■□□□ 1.33
PDE6B-206ENST00000467152 IFIT5Q13325 482 aaKnown RBP23.38■■□□□ 1.33
PDE6B-206ENST00000467152 GLIS2Q9BZE0 524 aaPredicted RBP23.38■■□□□ 1.33
PDE6B-206ENST00000467152 CHMP3Q9Y3E7 222 aa23.38■■□□□ 1.33
PDE6B-206ENST00000467152 H7C1D1 291 aa23.37■■□□□ 1.33
PDE6B-206ENST00000467152 WASHC4Q2M389 1173 aa23.37■■□□□ 1.33
PDE6B-206ENST00000467152 RABL6Q3YEC7 729 aaPredicted RBP23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms