RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 DCAF5Q96JK2 942 aa21.2■□□□□ 0.98
SNAPC3-205ENST00000467062 HDAC5Q9UQL6 1122 aa21.2■□□□□ 0.98
SNAPC3-205ENST00000467062 STX6O43752 255 aa21.2■□□□□ 0.98
SNAPC3-205ENST00000467062 CCDC186Q7Z3E2 898 aa21.2■□□□□ 0.98
SNAPC3-205ENST00000467062 ERO1AQ96HE7 468 aa21.2■□□□□ 0.98
SNAPC3-205ENST00000467062 RASSF4Q9H2L5 321 aa21.2■□□□□ 0.98
SNAPC3-205ENST00000467062 CYP46A1Q9Y6A2 500 aa21.2■□□□□ 0.98
SNAPC3-205ENST00000467062 ZNF142P52746 1687 aaPredicted RBP21.2■□□□□ 0.98
SNAPC3-205ENST00000467062 EPB41L2O43491 1005 aaKnown RBP21.19■□□□□ 0.98
SNAPC3-205ENST00000467062 CCDC192P0DO97 292 aa21.19■□□□□ 0.98
SNAPC3-205ENST00000467062 GJB2P29033 226 aa21.19■□□□□ 0.98
SNAPC3-205ENST00000467062 ME3Q16798 604 aa21.19■□□□□ 0.98
SNAPC3-205ENST00000467062 CTR9Q6PD62 1173 aa21.19■□□□□ 0.98
SNAPC3-205ENST00000467062 FBXO38Q6PIJ6 1188 aa21.19■□□□□ 0.98
SNAPC3-205ENST00000467062 DBNLQ9UJU6 430 aaKnown RBP21.19■□□□□ 0.98
SNAPC3-205ENST00000467062 PHRF1Q9P1Y6 1649 aaKnown RBP21.19■□□□□ 0.98
SNAPC3-205ENST00000467062 PTPN12Q05209 780 aaKnown RBP21.19■□□□□ 0.98
SNAPC3-205ENST00000467062 GIMAP6Q6P9H5 292 aa21.19■□□□□ 0.98
SNAPC3-205ENST00000467062 FMNL2Q96PY5 1086 aa21.19■□□□□ 0.98
SNAPC3-205ENST00000467062 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.19■□□□□ 0.98
SNAPC3-205ENST00000467062 FIBPO43427 364 aa21.18■□□□□ 0.98
SNAPC3-205ENST00000467062 ST3GAL1Q11201 340 aa21.18■□□□□ 0.98
SNAPC3-205ENST00000467062 ZSCAN22P10073 491 aaPredicted RBP21.18■□□□□ 0.98
SNAPC3-205ENST00000467062 TEX35Q5T0J7 233 aa21.18■□□□□ 0.98
SNAPC3-205ENST00000467062 DRC7Q8IY82 874 aa21.18■□□□□ 0.98
SNAPC3-205ENST00000467062 SEC62Q99442 399 aaKnown RBP21.18■□□□□ 0.98
SNAPC3-205ENST00000467062 ZSWIM6Q9HCJ5 1215 aa21.18■□□□□ 0.98
SNAPC3-205ENST00000467062 TPCN1Q9ULQ1 816 aa21.18■□□□□ 0.98
SNAPC3-205ENST00000467062 OVOS2A0A0G2JMS6 1433 aa21.18■□□□□ 0.98
SNAPC3-205ENST00000467062 MST1RQ04912 1400 aa21.18■□□□□ 0.98
SNAPC3-205ENST00000467062 ADAMTSL3P82987 1691 aa21.17■□□□□ 0.98
SNAPC3-205ENST00000467062 ZKSCAN1P17029 563 aaPredicted RBP21.17■□□□□ 0.98
SNAPC3-205ENST00000467062 MAP4K1Q92918 833 aa21.17■□□□□ 0.98
SNAPC3-205ENST00000467062 RSPH14Q9UHP6 348 aa21.17■□□□□ 0.98
SNAPC3-205ENST00000467062 ZNF215Q9UL58 517 aaPredicted RBP21.17■□□□□ 0.98
SNAPC3-205ENST00000467062 TRPM3Q9HCF6 1732 aaPredicted RBP21.17■□□□□ 0.98
SNAPC3-205ENST00000467062 SLC27A2O14975 620 aa21.17■□□□□ 0.98
SNAPC3-205ENST00000467062 CCDC129Q6ZRS4 1044 aa21.17■□□□□ 0.98
SNAPC3-205ENST00000467062 ST7Q9NRC1 585 aa21.17■□□□□ 0.98
SNAPC3-205ENST00000467062 MMP14P50281 582 aa21.16■□□□□ 0.98
SNAPC3-205ENST00000467062 MUM1L1Q5H9M0 696 aa21.16■□□□□ 0.98
SNAPC3-205ENST00000467062 TTLL7Q6ZT98 887 aa21.16■□□□□ 0.98
SNAPC3-205ENST00000467062 TXLNBQ8N3L3 684 aa21.16■□□□□ 0.98
SNAPC3-205ENST00000467062 ZNF592Q92610 1267 aa21.16■□□□□ 0.98
SNAPC3-205ENST00000467062 DBNDD2Q9BQY9 259 aa21.16■□□□□ 0.98
SNAPC3-205ENST00000467062 NBPF26B4DH59 902 aa21.16■□□□□ 0.98
SNAPC3-205ENST00000467062 A1BGP04217 495 aa21.16■□□□□ 0.98
SNAPC3-205ENST00000467062 STK3Q13188 491 aa21.16■□□□□ 0.98
SNAPC3-205ENST00000467062 NBPF14Q5TI25 921 aa21.16■□□□□ 0.98
SNAPC3-205ENST00000467062 ZSCAN25Q6NSZ9 544 aa21.16■□□□□ 0.98
SNAPC3-205ENST00000467062 NBPF10Q6P3W6 841 aaKnown RBP21.16■□□□□ 0.98
SNAPC3-205ENST00000467062 LMBR1LQ6UX01 489 aa21.16■□□□□ 0.98
SNAPC3-205ENST00000467062 NBPF15Q8N660 670 aa21.16■□□□□ 0.98
SNAPC3-205ENST00000467062 FAM200AQ8TCP9 573 aa21.16■□□□□ 0.98
SNAPC3-205ENST00000467062 TCHHQ07283 1943 aa21.15■□□□□ 0.98
SNAPC3-205ENST00000467062 VPS37CA5D8V6 355 aaPredicted RBP21.15■□□□□ 0.98
SNAPC3-205ENST00000467062 RFX5P48382 616 aaPredicted RBP21.15■□□□□ 0.98
SNAPC3-205ENST00000467062 LRMPQ12912 555 aa21.15■□□□□ 0.98
SNAPC3-205ENST00000467062 VPS53Q5VIR6 699 aa21.15■□□□□ 0.98
SNAPC3-205ENST00000467062 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.15■□□□□ 0.98
SNAPC3-205ENST00000467062 ZNF330Q9Y3S2 320 aaPredicted RBP21.15■□□□□ 0.98
SNAPC3-205ENST00000467062 FAM173BQ6P4H8 233 aa21.15■□□□□ 0.98
SNAPC3-205ENST00000467062 FERMT3Q86UX7 667 aa21.15■□□□□ 0.98
SNAPC3-205ENST00000467062 ATP6V1DQ9Y5K8 247 aa21.15■□□□□ 0.98
SNAPC3-205ENST00000467062 DNM1Q05193 864 aaKnown RBP21.14■□□□□ 0.98
SNAPC3-205ENST00000467062 TOM1L2Q6ZVM7 507 aa21.14■□□□□ 0.98
SNAPC3-205ENST00000467062 TNNI3KQ59H18 835 aa21.14■□□□□ 0.97
SNAPC3-205ENST00000467062 DDX46Q7L014 1031 aaKnown RBP21.14■□□□□ 0.97
SNAPC3-205ENST00000467062 ZBTB3Q9H5J0 574 aa21.14■□□□□ 0.97
SNAPC3-205ENST00000467062 FPGT-TNNI3KV9GXZ4 949 aa21.14■□□□□ 0.97
SNAPC3-205ENST00000467062 F13A1P00488 732 aa21.13■□□□□ 0.97
SNAPC3-205ENST00000467062 ELF2Q15723 593 aa21.13■□□□□ 0.97
SNAPC3-205ENST00000467062 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.13■□□□□ 0.972e-7■■■■□ 23.1
SNAPC3-205ENST00000467062 NOP2P46087 812 aaKnown RBP21.13■□□□□ 0.97
SNAPC3-205ENST00000467062 NEUROD6Q96NK8 337 aa21.13■□□□□ 0.97
SNAPC3-205ENST00000467062 CADPS2Q86UW7 1296 aa21.12■□□□□ 0.97
SNAPC3-205ENST00000467062 COPRSQ9NQ92 184 aa21.12■□□□□ 0.97
SNAPC3-205ENST00000467062 PRDM11Q9NQV5 511 aa21.12■□□□□ 0.97
SNAPC3-205ENST00000467062 TIMM10P62072 90 aa21.12■□□□□ 0.97
SNAPC3-205ENST00000467062 SPATA31A3Q5VYP0 1347 aa21.12■□□□□ 0.97
SNAPC3-205ENST00000467062 SLU7O95391 586 aaKnown RBP21.11■□□□□ 0.97
SNAPC3-205ENST00000467062 ZNF594Q96JF6 807 aaPredicted RBP21.11■□□□□ 0.97
SNAPC3-205ENST00000467062 STRN4Q9NRL3 753 aa21.11■□□□□ 0.97
SNAPC3-205ENST00000467062 ZNF446Q9NWS9 450 aa21.11■□□□□ 0.97
SNAPC3-205ENST00000467062 MTMR6Q9Y217 621 aa21.11■□□□□ 0.97
SNAPC3-205ENST00000467062 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.11■□□□□ 0.97
SNAPC3-205ENST00000467062 GTF2A1P52655 376 aaPredicted RBP21.11■□□□□ 0.97
SNAPC3-205ENST00000467062 PTPN14Q15678 1187 aa21.11■□□□□ 0.97
SNAPC3-205ENST00000467062 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.11■□□□□ 0.97
SNAPC3-205ENST00000467062 V9GYY5 206 aaPredicted RBP21.11■□□□□ 0.97
SNAPC3-205ENST00000467062 C5P01031 1676 aa21.11■□□□□ 0.97
SNAPC3-205ENST00000467062 COL15A1P39059 1388 aa21.11■□□□□ 0.97
SNAPC3-205ENST00000467062 TPM4P67936 248 aa21.1■□□□□ 0.97
SNAPC3-205ENST00000467062 CCDC85AQ96PX6 553 aaPredicted RBP21.1■□□□□ 0.97
SNAPC3-205ENST00000467062 DHX16O60231 1041 aaKnown RBP21.1■□□□□ 0.97
SNAPC3-205ENST00000467062 KCNB2Q92953 911 aa21.1■□□□□ 0.97
SNAPC3-205ENST00000467062 LRRC2Q9BYS8 371 aa21.1■□□□□ 0.97
SNAPC3-205ENST00000467062 TM6SF1Q9BZW5 370 aa21.1■□□□□ 0.97
SNAPC3-205ENST00000467062 TAF5LO75529 589 aa21.09■□□□□ 0.97
SNAPC3-205ENST00000467062 BLOC1S2Q6QNY1 142 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms