RNA–Protein interactions for RNA: ENST00000466541.1

SHROOM3-202, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 628 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-202ENST00000466541 BSDC1Q9NW68 430 aaPredicted RBP15.1■□□□□ 0.01
SHROOM3-202ENST00000466541 POLLQ9UGP5 575 aa15.1■□□□□ 0.01
SHROOM3-202ENST00000466541 GGA1Q9UJY5 639 aa15.1■□□□□ 0.01
SHROOM3-202ENST00000466541 LRRFIP2Q9Y608 721 aaKnown RBP15.1■□□□□ 0.01
SHROOM3-202ENST00000466541 SNED1Q8TER0 1413 aa15.09■□□□□ 0.01
SHROOM3-202ENST00000466541 WTIPA6NIX2 430 aaPredicted RBP15.09■□□□□ 0.01
SHROOM3-202ENST00000466541 RLBP1P12271 317 aa15.09■□□□□ 0.01
SHROOM3-202ENST00000466541 WASHC4Q2M389 1173 aa15.09■□□□□ 0.01
SHROOM3-202ENST00000466541 NIM1KQ8IY84 436 aa15.09■□□□□ 0.01
SHROOM3-202ENST00000466541 HELBQ8NG08 1087 aaPredicted RBP15.09■□□□□ 0.01
SHROOM3-202ENST00000466541 TBC1D16Q8TBP0 767 aa15.09■□□□□ 0.01
SHROOM3-202ENST00000466541 CNNM1Q9NRU3 951 aa15.09■□□□□ 0.01
SHROOM3-202ENST00000466541 MINPP1Q9UNW1 487 aa15.09■□□□□ 0.01
SHROOM3-202ENST00000466541 G3V3G9 751 aa15.08■□□□□ 0
SHROOM3-202ENST00000466541 GNAI3P08754 354 aa15.08■□□□□ 0
SHROOM3-202ENST00000466541 DOK7Q18PE1 504 aa15.08■□□□□ 0
SHROOM3-202ENST00000466541 DCAF8Q5TAQ9 597 aa15.08■□□□□ 0
SHROOM3-202ENST00000466541 DPY19L2Q6NUT2 758 aa15.08■□□□□ 0
SHROOM3-202ENST00000466541 LDHAL6AQ6ZMR3 332 aa15.08■□□□□ 0
SHROOM3-202ENST00000466541 KLHDC4Q8TBB5 520 aa15.08■□□□□ 0
SHROOM3-202ENST00000466541 RTFDC1Q9BY42 306 aaPredicted RBP15.08■□□□□ 0
SHROOM3-202ENST00000466541 NMRK2Q9NPI5 230 aa15.08■□□□□ 0
SHROOM3-202ENST00000466541 GJA3Q9Y6H8 435 aa15.08■□□□□ 0
SHROOM3-202ENST00000466541 COL4A5P29400 1685 aa15.08■□□□□ 0
SHROOM3-202ENST00000466541 KDM2BQ8NHM5 1336 aa15.08■□□□□ 0
SHROOM3-202ENST00000466541 GLTPD2A6NH11 291 aa15.07■□□□□ 0
SHROOM3-202ENST00000466541 TAF5LO75529 589 aa15.07■□□□□ 0
SHROOM3-202ENST00000466541 DDNO94850 711 aaPredicted RBP15.07■□□□□ 0
SHROOM3-202ENST00000466541 KCNJ4P48050 445 aa15.07■□□□□ 0
SHROOM3-202ENST00000466541 EYA3Q99504 573 aa15.07■□□□□ 0
SHROOM3-202ENST00000466541 ZC3H12CQ9C0D7 883 aaKnown RBP15.07■□□□□ 0
SHROOM3-202ENST00000466541 DBNDD1Q9H9R9 158 aa15.07■□□□□ 0
SHROOM3-202ENST00000466541 RRAGCQ9HB90 399 aa15.07■□□□□ 0
SHROOM3-202ENST00000466541 XDHP47989 1333 aa15.07■□□□□ 0
SHROOM3-202ENST00000466541 ZNF541Q9H0D2 1346 aa15.07■□□□□ 0
SHROOM3-202ENST00000466541 DUOX1Q9NRD9 1551 aa15.07■□□□□ 0
SHROOM3-202ENST00000466541 EIF6P56537 245 aaKnown RBP15.06■□□□□ 0
SHROOM3-202ENST00000466541 CHRNDQ07001 517 aa15.06■□□□□ 0
SHROOM3-202ENST00000466541 RABL6Q3YEC7 729 aaPredicted RBP15.06■□□□□ 0
SHROOM3-202ENST00000466541 PUS3Q9BZE2 481 aaKnown RBP15.06■□□□□ 0
SHROOM3-202ENST00000466541 HDAC5Q9UQL6 1122 aa15.06■□□□□ 0
SHROOM3-202ENST00000466541 ZC3H4Q9UPT8 1303 aaKnown RBP15.06■□□□□ 0
SHROOM3-202ENST00000466541 SNAP23O00161 211 aa15.05■□□□□ -0
SHROOM3-202ENST00000466541 RAD17O75943 681 aa15.05■□□□□ -0
SHROOM3-202ENST00000466541 ATP2B4P23634 1241 aa15.05■□□□□ -0
SHROOM3-202ENST00000466541 KIAA2012Q0VF49 1180 aa15.05■□□□□ -0
SHROOM3-202ENST00000466541 ANKRD2Q9GZV1 360 aa15.05■□□□□ -0
SHROOM3-202ENST00000466541 SIL1Q9H173 461 aa15.05■□□□□ -0
SHROOM3-202ENST00000466541 C1orf115Q9H7X2 142 aa15.05■□□□□ -0
SHROOM3-202ENST00000466541 PODXL2Q9NZ53 605 aa15.05■□□□□ -0
SHROOM3-202ENST00000466541 LTBP1Q14766 1721 aa15.05■□□□□ -0
SHROOM3-202ENST00000466541 FZD9O00144 591 aa15.04■□□□□ -0
SHROOM3-202ENST00000466541 GNAI2P04899 355 aa15.04■□□□□ -0
SHROOM3-202ENST00000466541 LRRC24Q50LG9 513 aa15.04■□□□□ -0
SHROOM3-202ENST00000466541 ZNRF3Q9ULT6 936 aa15.04■□□□□ -0
SHROOM3-202ENST00000466541 ZNF804BA4D1E1 1349 aa15.03■□□□□ -0
SHROOM3-202ENST00000466541 ECE2O60344 883 aa15.03■□□□□ -0
SHROOM3-202ENST00000466541 MS4A1P11836 297 aa15.03■□□□□ -0
SHROOM3-202ENST00000466541 C16orf71Q8IYS4 520 aaPredicted RBP15.03■□□□□ -0
SHROOM3-202ENST00000466541 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.03■□□□□ -0
SHROOM3-202ENST00000466541 VPS33BQ9H267 617 aa15.03■□□□□ -0
SHROOM3-202ENST00000466541 COG6Q9Y2V7 657 aa15.03■□□□□ -0
SHROOM3-202ENST00000466541 SRGAP3O43295 1099 aa15.02■□□□□ -0
SHROOM3-202ENST00000466541 KLRK1P26718 216 aa15.02■□□□□ -0
SHROOM3-202ENST00000466541 METTL24Q5JXM2 366 aa15.02■□□□□ -0
SHROOM3-202ENST00000466541 C20orf194Q5TEA3 1177 aa15.02■□□□□ -0
SHROOM3-202ENST00000466541 FBXW7Q969H0 707 aa15.02■□□□□ -0
SHROOM3-202ENST00000466541 KCNQ5Q9NR82 932 aa15.02■□□□□ -0
SHROOM3-202ENST00000466541 PA2G4Q9UQ80 394 aaKnown RBP15.02■□□□□ -0
SHROOM3-202ENST00000466541 LEMD3Q9Y2U8 911 aa15.02■□□□□ -0
SHROOM3-202ENST00000466541 A0A1B0GUL6 1792 aa15.02□□□□□ -0.01
SHROOM3-202ENST00000466541 YDJCA8MPS7 323 aa15.01□□□□□ -0.01
SHROOM3-202ENST00000466541 CXCL9Q07325 125 aa15.01□□□□□ -0.01
SHROOM3-202ENST00000466541 TXNRD3Q86VQ6 643 aa15.01□□□□□ -0.01
SHROOM3-202ENST00000466541 ZBTB7BO15156 539 aaPredicted RBP15□□□□□ -0.01
SHROOM3-202ENST00000466541 VEGFAP15692 232 aaPredicted RBP15□□□□□ -0.01
SHROOM3-202ENST00000466541 RFX5P48382 616 aaPredicted RBP15□□□□□ -0.01
SHROOM3-202ENST00000466541 CIAPIN1Q6FI81 312 aa15□□□□□ -0.01
SHROOM3-202ENST00000466541 GPC2Q8N158 579 aa15□□□□□ -0.01
SHROOM3-202ENST00000466541 RIPOR2Q9Y4F9 1068 aa15□□□□□ -0.01
SHROOM3-202ENST00000466541 MROH5Q6ZUA9 1318 aa14.99□□□□□ -0.01
SHROOM3-202ENST00000466541 KIF3CO14782 793 aa14.99□□□□□ -0.01
SHROOM3-202ENST00000466541 PTPN12Q05209 780 aaKnown RBP14.99□□□□□ -0.01
SHROOM3-202ENST00000466541 MVPQ14764 893 aaKnown RBP14.99□□□□□ -0.01
SHROOM3-202ENST00000466541 TNIP1Q15025 636 aa14.99□□□□□ -0.01
SHROOM3-202ENST00000466541 WDR90Q96KV7 1748 aa14.98□□□□□ -0.01
SHROOM3-202ENST00000466541 PNMA6EA0A0J9YXQ4 647 aa14.98□□□□□ -0.01
SHROOM3-202ENST00000466541 POTECB2RU33 542 aa14.98□□□□□ -0.01
SHROOM3-202ENST00000466541 EYA2O00167 538 aa14.98□□□□□ -0.01
SHROOM3-202ENST00000466541 PSMD14O00487 310 aa14.98□□□□□ -0.01
SHROOM3-202ENST00000466541 EAPPQ56P03 285 aaPredicted RBP14.98□□□□□ -0.01
SHROOM3-202ENST00000466541 ZBTB12Q9Y330 459 aaPredicted RBP14.98□□□□□ -0.01
SHROOM3-202ENST00000466541 SCN9AQ15858 1988 aa14.98□□□□□ -0.01
SHROOM3-202ENST00000466541 MED23Q9ULK4 1368 aa14.98□□□□□ -0.01
SHROOM3-202ENST00000466541 LMOD1P29536 600 aaPredicted RBP14.97□□□□□ -0.01
SHROOM3-202ENST00000466541 GMPSP49915 693 aaPredicted RBP14.97□□□□□ -0.01
SHROOM3-202ENST00000466541 HACL1Q9UJ83 578 aa14.97□□□□□ -0.01
SHROOM3-202ENST00000466541 IQCA1LA6NCM1 817 aa14.96□□□□□ -0.01
SHROOM3-202ENST00000466541 ATG9AQ7Z3C6 839 aa14.96□□□□□ -0.01
SHROOM3-202ENST00000466541 DDX19BQ9UMR2 479 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms