RNA–Protein interactions for RNA: ENST00000466205.5

CD40-204, Transcript of CD40 molecule, humanhuman

TSL 1 (best)

Gene CD40, Length 822 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-204ENST00000466205 LTBP1Q14766 1721 aa12.88□□□□□ -0.35
CD40-204ENST00000466205 ANKRD18BA2A2Z9 1011 aa12.87□□□□□ -0.35
CD40-204ENST00000466205 ALDH1L1O75891 902 aa12.87□□□□□ -0.35
CD40-204ENST00000466205 CSF1RP07333 972 aa12.87□□□□□ -0.35
CD40-204ENST00000466205 HSPA6P17066 643 aa12.87□□□□□ -0.35
CD40-204ENST00000466205 EPHX2P34913 555 aa12.87□□□□□ -0.35
CD40-204ENST00000466205 RARSP54136 660 aaKnown RBP12.87□□□□□ -0.35
CD40-204ENST00000466205 CXCL9Q07325 125 aa12.87□□□□□ -0.35
CD40-204ENST00000466205 SMC1BQ8NDV3 1235 aa12.87□□□□□ -0.35
CD40-204ENST00000466205 ZNF594Q96JF6 807 aaPredicted RBP12.87□□□□□ -0.35
CD40-204ENST00000466205 EYA3Q99504 573 aa12.87□□□□□ -0.35
CD40-204ENST00000466205 MPHOSPH8Q99549 860 aa12.87□□□□□ -0.35
CD40-204ENST00000466205 TAF1DQ9H5J8 278 aaPredicted RBP12.87□□□□□ -0.35
CD40-204ENST00000466205 KCNQ5Q9NR82 932 aa12.87□□□□□ -0.35
CD40-204ENST00000466205 HACL1Q9UJ83 578 aa12.87□□□□□ -0.35
CD40-204ENST00000466205 IQCA1LA6NCM1 817 aa12.86□□□□□ -0.35
CD40-204ENST00000466205 G3V3G9 751 aa12.86□□□□□ -0.35
CD40-204ENST00000466205 ECE2O60344 883 aa12.86□□□□□ -0.35
CD40-204ENST00000466205 EPS15P42566 896 aa12.86□□□□□ -0.35
CD40-204ENST00000466205 SCNN1DP51172 638 aa12.86□□□□□ -0.35
CD40-204ENST00000466205 IFIT5Q13325 482 aaKnown RBP12.86□□□□□ -0.35
CD40-204ENST00000466205 TAF7LQ5H9L4 462 aa12.86□□□□□ -0.35
CD40-204ENST00000466205 DCAF8Q5TAQ9 597 aa12.86□□□□□ -0.35
CD40-204ENST00000466205 CIAPIN1Q6FI81 312 aa12.86□□□□□ -0.35
CD40-204ENST00000466205 FRAT1Q92837 279 aaPredicted RBP12.86□□□□□ -0.35
CD40-204ENST00000466205 L3MBTL3Q96JM7 780 aaPredicted RBP12.86□□□□□ -0.35
CD40-204ENST00000466205 ZC3H12CQ9C0D7 883 aaKnown RBP12.86□□□□□ -0.35
CD40-204ENST00000466205 VPS33BQ9H267 617 aa12.86□□□□□ -0.35
CD40-204ENST00000466205 BSDC1Q9NW68 430 aaPredicted RBP12.86□□□□□ -0.35
CD40-204ENST00000466205 MINPP1Q9UNW1 487 aa12.86□□□□□ -0.35
CD40-204ENST00000466205 TNNQ9UQP3 1299 aa12.86□□□□□ -0.35
CD40-204ENST00000466205 CLEC11AQ9Y240 323 aa12.86□□□□□ -0.35
CD40-204ENST00000466205 ZBTB12Q9Y330 459 aaPredicted RBP12.86□□□□□ -0.35
CD40-204ENST00000466205 XDHP47989 1333 aa12.86□□□□□ -0.35
CD40-204ENST00000466205 RTL9Q8NET4 1388 aa12.85□□□□□ -0.35
CD40-204ENST00000466205 BCAR3O75815 825 aa12.85□□□□□ -0.35
CD40-204ENST00000466205 CT47B1P0C2W7 299 aaPredicted RBP12.85□□□□□ -0.35
CD40-204ENST00000466205 LMOD1P29536 600 aaPredicted RBP12.85□□□□□ -0.35
CD40-204ENST00000466205 GMPSP49915 693 aaPredicted RBP12.85□□□□□ -0.35
CD40-204ENST00000466205 KAZALD1Q96I82 304 aa12.85□□□□□ -0.35
CD40-204ENST00000466205 BICC1Q9H694 974 aaKnown RBP12.85□□□□□ -0.35
CD40-204ENST00000466205 PODXL2Q9NZ53 605 aa12.85□□□□□ -0.35
CD40-204ENST00000466205 SHTN1A0MZ66 631 aa12.84□□□□□ -0.35
CD40-204ENST00000466205 SNAP23O00161 211 aa12.84□□□□□ -0.35
CD40-204ENST00000466205 PSMD14O00487 310 aa12.84□□□□□ -0.35
CD40-204ENST00000466205 PLIN1O60240 522 aa12.84□□□□□ -0.35
CD40-204ENST00000466205 TAF5LO75529 589 aa12.84□□□□□ -0.35
CD40-204ENST00000466205 ATP2B4P23634 1241 aa12.84□□□□□ -0.35
CD40-204ENST00000466205 KLRK1P26718 216 aa12.84□□□□□ -0.35
CD40-204ENST00000466205 FSTL1Q12841 308 aa12.84□□□□□ -0.35
CD40-204ENST00000466205 CCDC57Q2TAC2 916 aa12.84□□□□□ -0.35
CD40-204ENST00000466205 HELBQ8NG08 1087 aaPredicted RBP12.84□□□□□ -0.35
CD40-204ENST00000466205 KCNJ4P48050 445 aa12.83□□□□□ -0.36
CD40-204ENST00000466205 CCT4P50991 539 aaKnown RBP12.83□□□□□ -0.36
CD40-204ENST00000466205 CHRNDQ07001 517 aa12.83□□□□□ -0.36
CD40-204ENST00000466205 CHADLQ6NUI6 762 aa12.83□□□□□ -0.36
CD40-204ENST00000466205 FBXW7Q969H0 707 aa12.83□□□□□ -0.36
CD40-204ENST00000466205 ZBED9Q6R2W3 1325 aa12.83□□□□□ -0.36
CD40-204ENST00000466205 SCN4AP35499 1836 aa12.83□□□□□ -0.36
CD40-204ENST00000466205 TNIP1Q15025 636 aa12.82□□□□□ -0.36
CD40-204ENST00000466205 MAP1SQ66K74 1059 aaPredicted RBP12.82□□□□□ -0.36
CD40-204ENST00000466205 TXNRD3Q86VQ6 643 aa12.82□□□□□ -0.36
CD40-204ENST00000466205 LDHDQ86WU2 507 aa12.82□□□□□ -0.36
CD40-204ENST00000466205 CLUAP1Q96AJ1 413 aa12.82□□□□□ -0.36
CD40-204ENST00000466205 PUS3Q9BZE2 481 aaKnown RBP12.82□□□□□ -0.36
CD40-204ENST00000466205 API5Q9BZZ5 524 aaKnown RBP12.82□□□□□ -0.36
CD40-204ENST00000466205 USP44Q9H0E7 712 aa12.82□□□□□ -0.36
CD40-204ENST00000466205 CNNM1Q9NRU3 951 aa12.82□□□□□ -0.36
CD40-204ENST00000466205 UTYO14607 1347 aa12.82□□□□□ -0.36
CD40-204ENST00000466205 LDHAL6AQ6ZMR3 332 aa12.81□□□□□ -0.36
CD40-204ENST00000466205 ANKRD44Q8N8A2 993 aa12.81□□□□□ -0.36
CD40-204ENST00000466205 KLHDC4Q8TBB5 520 aa12.81□□□□□ -0.36
CD40-204ENST00000466205 ANKRD2Q9GZV1 360 aa12.81□□□□□ -0.36
CD40-204ENST00000466205 GPRC5DQ9NZD1 345 aa12.81□□□□□ -0.36
CD40-204ENST00000466205 ZNF804BA4D1E1 1349 aa12.81□□□□□ -0.36
CD40-204ENST00000466205 KIF16BQ96L93 1317 aa12.81□□□□□ -0.36
CD40-204ENST00000466205 APLP1P51693 650 aa12.8□□□□□ -0.36
CD40-204ENST00000466205 RBM26Q5T8P6 1007 aaKnown RBP12.8□□□□□ -0.36
CD40-204ENST00000466205 PNMA8AQ86V59 439 aaPredicted RBP12.8□□□□□ -0.36
CD40-204ENST00000466205 MICALL2Q8IY33 904 aa12.8□□□□□ -0.36
CD40-204ENST00000466205 MXD3Q9BW11 206 aa12.8□□□□□ -0.36
CD40-204ENST00000466205 CNOT7Q9UIV1 285 aaKnown RBP12.8□□□□□ -0.36
CD40-204ENST00000466205 MED23Q9ULK4 1368 aa12.8□□□□□ -0.36
CD40-204ENST00000466205 UBTFL1P0CB47 393 aaPredicted RBP12.79□□□□□ -0.36
CD40-204ENST00000466205 TRIM27P14373 513 aa12.79□□□□□ -0.36
CD40-204ENST00000466205 BRPF1P55201 1214 aaPredicted RBP12.79□□□□□ -0.36
CD40-204ENST00000466205 FMR1Q06787 632 aaKnown RBP eCLIP12.79□□□□□ -0.36
CD40-204ENST00000466205 LRRC24Q50LG9 513 aa12.79□□□□□ -0.36
CD40-204ENST00000466205 TRPM4Q8TD43 1214 aa12.79□□□□□ -0.36
CD40-204ENST00000466205 MEIS3Q99687 375 aa12.79□□□□□ -0.36
CD40-204ENST00000466205 ADARB2Q9NS39 739 aaKnown RBP12.79□□□□□ -0.36
CD40-204ENST00000466205 LEMD3Q9Y2U8 911 aa12.79□□□□□ -0.36
CD40-204ENST00000466205 ADAMTSL1Q8N6G6 1762 aa12.79□□□□□ -0.36
CD40-204ENST00000466205 SCN9AQ15858 1988 aa12.78□□□□□ -0.36
CD40-204ENST00000466205 RABL6Q3YEC7 729 aaPredicted RBP12.78□□□□□ -0.36
CD40-204ENST00000466205 TBC1D10BQ4KMP7 808 aaPredicted RBP12.78□□□□□ -0.36
CD40-204ENST00000466205 ATF7IPQ6VMQ6 1270 aa12.78□□□□□ -0.36
CD40-204ENST00000466205 SAMD7Q7Z3H4 446 aa12.78□□□□□ -0.36
CD40-204ENST00000466205 CNTROBQ8N137 903 aa12.78□□□□□ -0.36
CD40-204ENST00000466205 JAG2Q9Y219 1238 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms