RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 A2ML1A8K2U0 1454 aa7.33□□□□□ -1.24
EXOSC3-204ENST00000465860 ERVK-7P63135 1459 aa7.33□□□□□ -1.24
EXOSC3-204ENST00000465860 PALM3A6NDB9 673 aaPredicted RBP7.33□□□□□ -1.24
EXOSC3-204ENST00000465860 SFI1A8K8P3 1242 aa7.33□□□□□ -1.24
EXOSC3-204ENST00000465860 M0R2N6 131 aa7.33□□□□□ -1.24
EXOSC3-204ENST00000465860 ADH6P28332 368 aa7.33□□□□□ -1.24
EXOSC3-204ENST00000465860 PSMA6P60900 246 aaKnown RBP7.33□□□□□ -1.24
EXOSC3-204ENST00000465860 SIX5Q8N196 739 aa7.33□□□□□ -1.24
EXOSC3-204ENST00000465860 TSEN2Q8NCE0 465 aaKnown RBP7.33□□□□□ -1.24
EXOSC3-204ENST00000465860 SUV39H2Q9H5I1 410 aa7.33□□□□□ -1.24
EXOSC3-204ENST00000465860 AVENQ9NQS1 362 aaPredicted RBP7.33□□□□□ -1.24
EXOSC3-204ENST00000465860 TFIP11Q9UBB9 837 aaKnown RBP7.33□□□□□ -1.24
EXOSC3-204ENST00000465860 ANKRD50Q9ULJ7 1429 aa7.33□□□□□ -1.24
EXOSC3-204ENST00000465860 SYNMO15061 1565 aa7.33□□□□□ -1.24
EXOSC3-204ENST00000465860 TNRQ92752 1358 aa7.33□□□□□ -1.24
EXOSC3-204ENST00000465860 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.33□□□□□ -1.24
EXOSC3-204ENST00000465860 UBR1Q8IWV7 1749 aa7.32□□□□□ -1.24
EXOSC3-204ENST00000465860 E9PCH4 1651 aa7.32□□□□□ -1.24
EXOSC3-204ENST00000465860 GCC2Q8IWJ2 1684 aa7.32□□□□□ -1.24
EXOSC3-204ENST00000465860 MYO5BQ9ULV0 1848 aa7.32□□□□□ -1.24
EXOSC3-204ENST00000465860 PCBP4P57723 403 aaKnown RBP7.32□□□□□ -1.24
EXOSC3-204ENST00000465860 LAMC2Q13753 1193 aa7.32□□□□□ -1.24
EXOSC3-204ENST00000465860 ZNF468Q5VIY5 522 aaPredicted RBP7.32□□□□□ -1.24
EXOSC3-204ENST00000465860 POTEAQ6S8J7 498 aa7.32□□□□□ -1.24
EXOSC3-204ENST00000465860 SPOCK3Q9BQ16 436 aa7.32□□□□□ -1.24
EXOSC3-204ENST00000465860 MAFBQ9Y5Q3 323 aaPredicted RBP7.32□□□□□ -1.24
EXOSC3-204ENST00000465860 NEURL4Q96JN8 1562 aa7.32□□□□□ -1.24
EXOSC3-204ENST00000465860 POLR1AO95602 1720 aaPredicted RBP7.32□□□□□ -1.24
EXOSC3-204ENST00000465860 ROCK1Q13464 1354 aa7.32□□□□□ -1.24
EXOSC3-204ENST00000465860 EFCAB6Q5THR3 1501 aa7.32□□□□□ -1.24
EXOSC3-204ENST00000465860 LMTK2Q8IWU2 1503 aa7.32□□□□□ -1.24
EXOSC3-204ENST00000465860 PIK3C2BO00750 1634 aa7.31□□□□□ -1.24
EXOSC3-204ENST00000465860 LOC100996750A0A140TA64 210 aa7.31□□□□□ -1.24
EXOSC3-204ENST00000465860 KRBA1A5PL33 1030 aa7.31□□□□□ -1.24
EXOSC3-204ENST00000465860 MSTNO14793 375 aa7.31□□□□□ -1.24
EXOSC3-204ENST00000465860 DGKGP49619 791 aa7.31□□□□□ -1.24
EXOSC3-204ENST00000465860 GRIN2CQ14957 1233 aa7.31□□□□□ -1.24
EXOSC3-204ENST00000465860 ARHGAP31Q2M1Z3 1444 aa7.31□□□□□ -1.24
EXOSC3-204ENST00000465860 CHSY3Q70JA7 882 aa7.31□□□□□ -1.24
EXOSC3-204ENST00000465860 RHPN1Q8TCX5 695 aa7.31□□□□□ -1.24
EXOSC3-204ENST00000465860 KRTAP4-6Q9BYQ5 205 aa7.31□□□□□ -1.24
EXOSC3-204ENST00000465860 PRR12Q9ULL5 1215 aa7.31□□□□□ -1.24
EXOSC3-204ENST00000465860 HCN4Q9Y3Q4 1203 aa7.31□□□□□ -1.24
EXOSC3-204ENST00000465860 GPC6Q9Y625 555 aaPredicted RBP7.31□□□□□ -1.24
EXOSC3-204ENST00000465860 TET3O43151 1660 aa7.31□□□□□ -1.24
EXOSC3-204ENST00000465860 IQGAP3Q86VI3 1631 aa7.3□□□□□ -1.24
EXOSC3-204ENST00000465860 UGGT1Q9NYU2 1555 aa7.3□□□□□ -1.24
EXOSC3-204ENST00000465860 C21orf2O43822 256 aa7.3□□□□□ -1.24
EXOSC3-204ENST00000465860 PROCP04070 461 aa7.3□□□□□ -1.24
EXOSC3-204ENST00000465860 RASA1P20936 1047 aa7.3□□□□□ -1.24
EXOSC3-204ENST00000465860 HIRAP54198 1017 aaPredicted RBP7.3□□□□□ -1.24
EXOSC3-204ENST00000465860 SFSWAPQ12872 951 aaKnown RBP7.3□□□□□ -1.24
EXOSC3-204ENST00000465860 PHACTR1Q9C0D0 580 aa7.3□□□□□ -1.24
EXOSC3-204ENST00000465860 NEUROD4Q9HD90 331 aa7.3□□□□□ -1.24
EXOSC3-204ENST00000465860 NAIPQ13075 1403 aa7.29□□□□□ -1.24
EXOSC3-204ENST00000465860 GNB5O14775 395 aa7.29□□□□□ -1.24
EXOSC3-204ENST00000465860 C1orf53Q5VUE5 145 aa7.29□□□□□ -1.24
EXOSC3-204ENST00000465860 HSH2DQ96JZ2 352 aa7.29□□□□□ -1.24
EXOSC3-204ENST00000465860 RBM19Q9Y4C8 960 aaKnown RBP7.29□□□□□ -1.24
EXOSC3-204ENST00000465860 LTBP4Q8N2S1 1624 aa7.29□□□□□ -1.24
EXOSC3-204ENST00000465860 PLA2R1Q13018 1463 aa7.29□□□□□ -1.24
EXOSC3-204ENST00000465860 NLRP1Q9C000 1473 aa7.29□□□□□ -1.24
EXOSC3-204ENST00000465860 STRCP1A6NGW2 1772 aa7.28□□□□□ -1.24
EXOSC3-204ENST00000465860 NOS1P29475 1434 aa7.28□□□□□ -1.24
EXOSC3-204ENST00000465860 A6NJR5 290 aa7.28□□□□□ -1.24
EXOSC3-204ENST00000465860 PPP1R12BO60237 982 aaPredicted RBP7.28□□□□□ -1.24
EXOSC3-204ENST00000465860 SYT9Q86SS6 491 aa7.28□□□□□ -1.24
EXOSC3-204ENST00000465860 ALYREFQ86V81 257 aaKnown RBP7.28□□□□□ -1.24
EXOSC3-204ENST00000465860 CALR3Q96L12 384 aaKnown RBP7.28□□□□□ -1.24
EXOSC3-204ENST00000465860 PPP1R12CQ9BZL4 782 aa7.28□□□□□ -1.24
EXOSC3-204ENST00000465860 CHMP3Q9Y3E7 222 aa7.28□□□□□ -1.24
EXOSC3-204ENST00000465860 ATAD2Q6PL18 1390 aa7.28□□□□□ -1.24
EXOSC3-204ENST00000465860 PTPRTO14522 1441 aa7.27□□□□□ -1.24
EXOSC3-204ENST00000465860 SEC13P55735 322 aa7.27□□□□□ -1.25
EXOSC3-204ENST00000465860 CRTC2Q53ET0 693 aaPredicted RBP7.27□□□□□ -1.25
EXOSC3-204ENST00000465860 ZNF280CQ8ND82 737 aa7.27□□□□□ -1.25
EXOSC3-204ENST00000465860 SLC30A3Q99726 388 aa7.27□□□□□ -1.25
EXOSC3-204ENST00000465860 MDFIQ99750 246 aa7.27□□□□□ -1.25
EXOSC3-204ENST00000465860 KANK1Q14678 1352 aa7.27□□□□□ -1.25
EXOSC3-204ENST00000465860 NUP155O75694 1391 aa7.26□□□□□ -1.25
EXOSC3-204ENST00000465860 ELOA3CA0A087WX78 387 aaPredicted RBP7.26□□□□□ -1.25
EXOSC3-204ENST00000465860 ELOA3DA6NLF2 546 aaPredicted RBP7.26□□□□□ -1.25
EXOSC3-204ENST00000465860 PIK3R2O00459 728 aa7.26□□□□□ -1.25
EXOSC3-204ENST00000465860 PTK7Q13308 1070 aa7.26□□□□□ -1.25
EXOSC3-204ENST00000465860 IDI1Q13907 227 aa7.26□□□□□ -1.25
EXOSC3-204ENST00000465860 ELOA3BQ3SY89 546 aa7.26□□□□□ -1.25
EXOSC3-204ENST00000465860 ALDH16A1Q8IZ83 802 aa7.26□□□□□ -1.25
EXOSC3-204ENST00000465860 ELOA3Q8NG57 546 aa7.26□□□□□ -1.25
EXOSC3-204ENST00000465860 SCG3Q8WXD2 468 aaKnown RBP7.26□□□□□ -1.25
EXOSC3-204ENST00000465860 SUSD3Q96L08 255 aa7.26□□□□□ -1.25
EXOSC3-204ENST00000465860 C2orf49Q9BVC5 232 aaPredicted RBP7.26□□□□□ -1.25
EXOSC3-204ENST00000465860 BRD7Q9NPI1 651 aa7.26□□□□□ -1.25
EXOSC3-204ENST00000465860 SPHKAPQ2M3C7 1700 aa7.26□□□□□ -1.25
EXOSC3-204ENST00000465860 HFM1A2PYH4 1435 aa7.26□□□□□ -1.25
EXOSC3-204ENST00000465860 ZNF335Q9H4Z2 1342 aaPredicted RBP7.26□□□□□ -1.25
EXOSC3-204ENST00000465860 KDM5AP29375 1690 aaKnown RBP7.25□□□□□ -1.25
EXOSC3-204ENST00000465860 IQGAP1P46940 1657 aa7.25□□□□□ -1.25
EXOSC3-204ENST00000465860 ARHGAP23Q9P227 1491 aa7.25□□□□□ -1.25
EXOSC3-204ENST00000465860 SIN3BO75182 1162 aa7.25□□□□□ -1.25
EXOSC3-204ENST00000465860 LGR5O75473 907 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms