RNA–Protein interactions for RNA: ENST00000465842.1

CHKB-204, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 428 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-204ENST00000465842 DCAF8Q5TAQ9 597 aa23.83■■□□□ 1.41
CHKB-204ENST00000465842 LMBR1LQ6UX01 489 aa23.83■■□□□ 1.41
CHKB-204ENST00000465842 GPR101Q96P66 508 aaPredicted RBP23.83■■□□□ 1.41
CHKB-204ENST00000465842 API5Q9BZZ5 524 aaKnown RBP23.83■■□□□ 1.41
CHKB-204ENST00000465842 PODXL2Q9NZ53 605 aa23.83■■□□□ 1.41
CHKB-204ENST00000465842 HACL1Q9UJ83 578 aa23.83■■□□□ 1.41
CHKB-204ENST00000465842 KIF16BQ96L93 1317 aa23.83■■□□□ 1.4
CHKB-204ENST00000465842 SPEF2Q9C093 1822 aa23.82■■□□□ 1.4
CHKB-204ENST00000465842 LMOD1P29536 600 aaPredicted RBP23.82■■□□□ 1.4
CHKB-204ENST00000465842 TAF7LQ5H9L4 462 aa23.82■■□□□ 1.4
CHKB-204ENST00000465842 SMC1BQ8NDV3 1235 aa23.82■■□□□ 1.4
CHKB-204ENST00000465842 ZC3H12CQ9C0D7 883 aaKnown RBP23.82■■□□□ 1.4
CHKB-204ENST00000465842 NBPF7P0C2Y1 421 aaPredicted RBP23.81■■□□□ 1.4
CHKB-204ENST00000465842 ATP2B4P23634 1241 aa23.8■■□□□ 1.4
CHKB-204ENST00000465842 CCT4P50991 539 aaKnown RBP23.8■■□□□ 1.4
CHKB-204ENST00000465842 BRPF1P55201 1214 aaPredicted RBP23.8■■□□□ 1.4
CHKB-204ENST00000465842 FSTL1Q12841 308 aa23.8■■□□□ 1.4
CHKB-204ENST00000465842 CCDC57Q2TAC2 916 aa23.8■■□□□ 1.4
CHKB-204ENST00000465842 EPHA10Q5JZY3 1008 aa23.8■■□□□ 1.4
CHKB-204ENST00000465842 SUCLG2Q96I99 432 aa23.8■■□□□ 1.4
CHKB-204ENST00000465842 DBNDD1Q9H9R9 158 aa23.8■■□□□ 1.4
CHKB-204ENST00000465842 MINPP1Q9UNW1 487 aa23.8■■□□□ 1.4
CHKB-204ENST00000465842 LTBP1Q14766 1721 aa23.79■■□□□ 1.4
CHKB-204ENST00000465842 RAD17O75943 681 aa23.79■■□□□ 1.4
CHKB-204ENST00000465842 CXCL9Q07325 125 aa23.79■■□□□ 1.4
CHKB-204ENST00000465842 DOK7Q18PE1 504 aa23.79■■□□□ 1.4
CHKB-204ENST00000465842 EAPPQ56P03 285 aaPredicted RBP23.79■■□□□ 1.4
CHKB-204ENST00000465842 CIAPIN1Q6FI81 312 aa23.79■■□□□ 1.4
CHKB-204ENST00000465842 HSPA6P17066 643 aa23.78■■□□□ 1.4
CHKB-204ENST00000465842 EPHX2P34913 555 aa23.78■■□□□ 1.4
CHKB-204ENST00000465842 TNIP1Q15025 636 aa23.78■■□□□ 1.4
CHKB-204ENST00000465842 TAF1DQ9H5J8 278 aaPredicted RBP23.78■■□□□ 1.4
CHKB-204ENST00000465842 UTYO14607 1347 aa23.78■■□□□ 1.4
CHKB-204ENST00000465842 SCN4AP35499 1836 aa23.77■■□□□ 1.4
CHKB-204ENST00000465842 IPO8O15397 1037 aaKnown RBP23.77■■□□□ 1.4
CHKB-204ENST00000465842 ECE2O60344 883 aa23.77■■□□□ 1.4
CHKB-204ENST00000465842 FRAT1Q92837 279 aaPredicted RBP23.77■■□□□ 1.4
CHKB-204ENST00000465842 ANKRD2Q9GZV1 360 aa23.77■■□□□ 1.4
CHKB-204ENST00000465842 KCNJ4P48050 445 aa23.76■■□□□ 1.39
CHKB-204ENST00000465842 YDJCA8MPS7 323 aa23.75■■□□□ 1.39
CHKB-204ENST00000465842 USP44Q9H0E7 712 aa23.75■■□□□ 1.39
CHKB-204ENST00000465842 BICC1Q9H694 974 aaKnown RBP23.75■■□□□ 1.39
CHKB-204ENST00000465842 CLEC11AQ9Y240 323 aa23.75■■□□□ 1.39
CHKB-204ENST00000465842 BCAR3O75815 825 aa23.74■■□□□ 1.39
CHKB-204ENST00000465842 PNMA8AQ86V59 439 aaPredicted RBP23.74■■□□□ 1.39
CHKB-204ENST00000465842 ARHGAP45Q92619 1136 aa23.74■■□□□ 1.39
CHKB-204ENST00000465842 ZNF594Q96JF6 807 aaPredicted RBP23.74■■□□□ 1.39
CHKB-204ENST00000465842 CNNM1Q9NRU3 951 aa23.74■■□□□ 1.39
CHKB-204ENST00000465842 LEMD3Q9Y2U8 911 aa23.74■■□□□ 1.39
CHKB-204ENST00000465842 POTEIP0CG38 1075 aa23.73■■□□□ 1.39
CHKB-204ENST00000465842 POTEJP0CG39 1038 aa23.73■■□□□ 1.39
CHKB-204ENST00000465842 GMPSP49915 693 aaPredicted RBP23.73■■□□□ 1.39
CHKB-204ENST00000465842 SCNN1DP51172 638 aa23.73■■□□□ 1.39
CHKB-204ENST00000465842 CHRNDQ07001 517 aa23.73■■□□□ 1.39
CHKB-204ENST00000465842 CHADLQ6NUI6 762 aa23.73■■□□□ 1.39
CHKB-204ENST00000465842 LDHAL6AQ6ZMR3 332 aa23.73■■□□□ 1.39
CHKB-204ENST00000465842 LDHDQ86WU2 507 aa23.73■■□□□ 1.39
CHKB-204ENST00000465842 KAZALD1Q96I82 304 aa23.73■■□□□ 1.39
CHKB-204ENST00000465842 UBTFL1P0CB47 393 aaPredicted RBP23.72■■□□□ 1.39
CHKB-204ENST00000465842 MED23Q9ULK4 1368 aa23.71■■□□□ 1.39
CHKB-204ENST00000465842 ZNF804BA4D1E1 1349 aa23.71■■□□□ 1.39
CHKB-204ENST00000465842 EPS15P42566 896 aa23.71■■□□□ 1.39
CHKB-204ENST00000465842 GPRC5DQ9NZD1 345 aa23.71■■□□□ 1.39
CHKB-204ENST00000465842 WTIPA6NIX2 430 aaPredicted RBP23.7■■□□□ 1.38
CHKB-204ENST00000465842 PSMD14O00487 310 aa23.7■■□□□ 1.38
CHKB-204ENST00000465842 PLIN1O60240 522 aa23.7■■□□□ 1.38
CHKB-204ENST00000465842 APLP1P51693 650 aa23.7■■□□□ 1.38
CHKB-204ENST00000465842 RABL6Q3YEC7 729 aaPredicted RBP23.7■■□□□ 1.38
CHKB-204ENST00000465842 ANKRD44Q8N8A2 993 aa23.7■■□□□ 1.38
CHKB-204ENST00000465842 HELBQ8NG08 1087 aaPredicted RBP23.7■■□□□ 1.38
CHKB-204ENST00000465842 TAF5LO75529 589 aa23.69■■□□□ 1.38
CHKB-204ENST00000465842 ATF7IPQ6VMQ6 1270 aa23.69■■□□□ 1.38
CHKB-204ENST00000465842 HDAC5Q9UQL6 1122 aa23.69■■□□□ 1.38
CHKB-204ENST00000465842 TRIM27P14373 513 aa23.68■■□□□ 1.38
CHKB-204ENST00000465842 ZKSCAN2Q63HK3 967 aa23.68■■□□□ 1.38
CHKB-204ENST00000465842 CLUAP1Q96AJ1 413 aa23.68■■□□□ 1.38
CHKB-204ENST00000465842 KCNQ5Q9NR82 932 aa23.68■■□□□ 1.38
CHKB-204ENST00000465842 ADARB2Q9NS39 739 aaKnown RBP23.68■■□□□ 1.38
CHKB-204ENST00000465842 ZBTB12Q9Y330 459 aaPredicted RBP23.68■■□□□ 1.38
CHKB-204ENST00000465842 FBXW7Q969H0 707 aa23.67■■□□□ 1.38
CHKB-204ENST00000465842 H7C1D1 291 aa23.66■■□□□ 1.38
CHKB-204ENST00000465842 INTS3Q68E01 1043 aaKnown RBP23.66■■□□□ 1.38
CHKB-204ENST00000465842 USP50Q70EL3 339 aaPredicted RBP23.66■■□□□ 1.38
CHKB-204ENST00000465842 PODNQ7Z5L7 613 aa23.66■■□□□ 1.38
CHKB-204ENST00000465842 CNOT7Q9UIV1 285 aaKnown RBP23.66■■□□□ 1.38
CHKB-204ENST00000465842 RPS12P25398 132 aaKnown RBP23.65■■□□□ 1.38
CHKB-204ENST00000465842 MICALL2Q8IY33 904 aa23.65■■□□□ 1.38
CHKB-204ENST00000465842 MEIS3Q99687 375 aa23.65■■□□□ 1.38
CHKB-204ENST00000465842 COA1Q9GZY4 146 aa23.65■■□□□ 1.38
CHKB-204ENST00000465842 KLRK1P26718 216 aa23.64■■□□□ 1.37
CHKB-204ENST00000465842 PUS3Q9BZE2 481 aaKnown RBP23.64■■□□□ 1.37
CHKB-204ENST00000465842 TNNQ9UQP3 1299 aa23.64■■□□□ 1.37
CHKB-204ENST00000465842 LRRFIP2Q9Y608 721 aaKnown RBP23.64■■□□□ 1.37
CHKB-204ENST00000465842 USP17L3A6NCW0 530 aa23.63■■□□□ 1.37
CHKB-204ENST00000465842 USP17L4A6NCW7 530 aa23.63■■□□□ 1.37
CHKB-204ENST00000465842 SNAP23O00161 211 aa23.63■■□□□ 1.37
CHKB-204ENST00000465842 GNAI3P08754 354 aa23.63■■□□□ 1.37
CHKB-204ENST00000465842 MAP1SQ66K74 1059 aaPredicted RBP23.63■■□□□ 1.37
CHKB-204ENST00000465842 USP17L1Q7RTZ2 530 aa23.63■■□□□ 1.37
CHKB-204ENST00000465842 TXNRD3Q86VQ6 643 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms