RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 RGS3P49796 1198 aa21.25■□□□□ 0.99
PTPRU-206ENST00000465525 CRAMP1Q96RY5 1269 aa21.25■□□□□ 0.99
PTPRU-206ENST00000465525 MPHOSPH8Q99549 860 aa21.25■□□□□ 0.99
PTPRU-206ENST00000465525 CIAO1O76071 339 aa21.24■□□□□ 0.99
PTPRU-206ENST00000465525 ALDH1B1P30837 517 aa21.24■□□□□ 0.99
PTPRU-206ENST00000465525 STYK1Q6J9G0 422 aa21.24■□□□□ 0.99
PTPRU-206ENST00000465525 ERC1Q8IUD2 1116 aa21.24■□□□□ 0.99
PTPRU-206ENST00000465525 OTUD7AQ8TE49 926 aaPredicted RBP21.24■□□□□ 0.99
PTPRU-206ENST00000465525 RIPOR2Q9Y4F9 1068 aa21.24■□□□□ 0.99
PTPRU-206ENST00000465525 A0A0G2JLW4 131 aa21.24■□□□□ 0.99
PTPRU-206ENST00000465525 DPEP1P16444 411 aa21.24■□□□□ 0.99
PTPRU-206ENST00000465525 IL15P40933 162 aaPredicted RBP21.24■□□□□ 0.99
PTPRU-206ENST00000465525 RPS8P62241 208 aaKnown RBP21.24■□□□□ 0.99
PTPRU-206ENST00000465525 HELBQ8NG08 1087 aaPredicted RBP21.24■□□□□ 0.99
PTPRU-206ENST00000465525 ZNF622Q969S3 477 aaKnown RBP eCLIP21.24■□□□□ 0.99
PTPRU-206ENST00000465525 FHDC1Q9C0D6 1143 aaPredicted RBP21.24■□□□□ 0.99
PTPRU-206ENST00000465525 GRAPQ13588 217 aa21.23■□□□□ 0.99
PTPRU-206ENST00000465525 GRAPLQ8TC17 118 aaPredicted RBP21.23■□□□□ 0.99
PTPRU-206ENST00000465525 METTL24Q5JXM2 366 aa21.22■□□□□ 0.99
PTPRU-206ENST00000465525 KCNA3P22001 575 aa21.21■□□□□ 0.99
PTPRU-206ENST00000465525 CNKSR1Q969H4 720 aa21.21■□□□□ 0.99
PTPRU-206ENST00000465525 DLEC1Q9Y238 1755 aa21.21■□□□□ 0.99
PTPRU-206ENST00000465525 BBOX1O75936 387 aa21.21■□□□□ 0.99
PTPRU-206ENST00000465525 AACSQ86V21 672 aa21.21■□□□□ 0.99
PTPRU-206ENST00000465525 CEP126Q9P2H0 1117 aa21.21■□□□□ 0.99
PTPRU-206ENST00000465525 FBXO3Q9UK99 471 aa21.21■□□□□ 0.99
PTPRU-206ENST00000465525 KIAA1551Q9HCM1 1747 aa21.2■□□□□ 0.98
PTPRU-206ENST00000465525 TAF5LO75529 589 aa21.2■□□□□ 0.98
PTPRU-206ENST00000465525 SYT17Q9BSW7 474 aa21.2■□□□□ 0.98
PTPRU-206ENST00000465525 BSDC1Q9NW68 430 aaPredicted RBP21.2■□□□□ 0.98
PTPRU-206ENST00000465525 PIM2Q9P1W9 311 aa21.2■□□□□ 0.98
PTPRU-206ENST00000465525 CHRNDQ07001 517 aa21.19■□□□□ 0.98
PTPRU-206ENST00000465525 CLASRPQ8N2M8 674 aaKnown RBP21.19■□□□□ 0.98
PTPRU-206ENST00000465525 EAF2Q96CJ1 260 aaPredicted RBP21.19■□□□□ 0.98
PTPRU-206ENST00000465525 CCDC8Q9H0W5 538 aaPredicted RBP21.19■□□□□ 0.98
PTPRU-206ENST00000465525 TLR7Q9NYK1 1049 aaKnown RBP21.19■□□□□ 0.98
PTPRU-206ENST00000465525 SLX4Q8IY92 1834 aa21.19■□□□□ 0.98
PTPRU-206ENST00000465525 SNAP23O00161 211 aa21.18■□□□□ 0.98
PTPRU-206ENST00000465525 TNNI3KQ59H18 835 aa21.18■□□□□ 0.98
PTPRU-206ENST00000465525 TSHZ3Q63HK5 1081 aa21.18■□□□□ 0.98
PTPRU-206ENST00000465525 TTLL6Q8N841 843 aa21.18■□□□□ 0.98
PTPRU-206ENST00000465525 NLGN2Q8NFZ4 835 aa21.18■□□□□ 0.98
PTPRU-206ENST00000465525 MINPP1Q9UNW1 487 aa21.18■□□□□ 0.98
PTPRU-206ENST00000465525 FPGT-TNNI3KV9GXZ4 949 aa21.18■□□□□ 0.98
PTPRU-206ENST00000465525 MROH5Q6ZUA9 1318 aa21.18■□□□□ 0.98
PTPRU-206ENST00000465525 SRCAPQ6ZRS2 3230 aa21.18■□□□□ 0.98
PTPRU-206ENST00000465525 TMC4Q7Z404 712 aa21.18■□□□□ 0.98
PTPRU-206ENST00000465525 VGLL2Q8N8G2 317 aa21.18■□□□□ 0.98
PTPRU-206ENST00000465525 ZNF609O15014 1411 aa21.17■□□□□ 0.98
PTPRU-206ENST00000465525 WTIPA6NIX2 430 aaPredicted RBP21.16■□□□□ 0.98
PTPRU-206ENST00000465525 PPEF1O14829 653 aaPredicted RBP21.16■□□□□ 0.98
PTPRU-206ENST00000465525 IFIT2P09913 472 aaKnown RBP21.16■□□□□ 0.98
PTPRU-206ENST00000465525 TIMM10P62072 90 aa21.16■□□□□ 0.98
PTPRU-206ENST00000465525 PLEKHM2Q8IWE5 1019 aa21.16■□□□□ 0.98
PTPRU-206ENST00000465525 NEUROD6Q96NK8 337 aa21.16■□□□□ 0.98
PTPRU-206ENST00000465525 WWC3Q9ULE0 1092 aa21.16■□□□□ 0.98
PTPRU-206ENST00000465525 PDE8BO95263 885 aa21.15■□□□□ 0.98
PTPRU-206ENST00000465525 PRPF40BQ6NWY9 871 aaKnown RBP21.15■□□□□ 0.98
PTPRU-206ENST00000465525 OLFM4Q6UX06 510 aa21.15■□□□□ 0.98
PTPRU-206ENST00000465525 ZNF219Q9P2Y4 722 aaPredicted RBP21.15■□□□□ 0.98
PTPRU-206ENST00000465525 LRRC37AA6NMS7 1700 aa21.15■□□□□ 0.98
PTPRU-206ENST00000465525 ATP2B3Q16720 1220 aa21.15■□□□□ 0.98
PTPRU-206ENST00000465525 DALRD3Q5D0E6 543 aaKnown RBP21.15■□□□□ 0.98
PTPRU-206ENST00000465525 SALL3Q9BXA9 1300 aa21.14■□□□□ 0.97
PTPRU-206ENST00000465525 A0A1B0GUL7 405 aa21.14■□□□□ 0.97
PTPRU-206ENST00000465525 ADORA1P30542 326 aa21.14■□□□□ 0.97
PTPRU-206ENST00000465525 SP8Q8IXZ3 490 aa21.14■□□□□ 0.97
PTPRU-206ENST00000465525 DBNDD2Q9BQY9 259 aa21.14■□□□□ 0.97
PTPRU-206ENST00000465525 ARAP2Q8WZ64 1704 aa21.14■□□□□ 0.97
PTPRU-206ENST00000465525 MX1P20591 662 aa21.13■□□□□ 0.97
PTPRU-206ENST00000465525 TMX4Q9H1E5 349 aaPredicted RBP21.13■□□□□ 0.97
PTPRU-206ENST00000465525 GPR108Q9NPR9 543 aa21.13■□□□□ 0.97
PTPRU-206ENST00000465525 DBNLQ9UJU6 430 aaKnown RBP21.13■□□□□ 0.97
PTPRU-206ENST00000465525 ATP6V0A2Q9Y487 856 aa21.13■□□□□ 0.97
PTPRU-206ENST00000465525 AKAP2Q9Y2D5 859 aa21.12■□□□□ 0.97
PTPRU-206ENST00000465525 PDE1AP54750 535 aa21.12■□□□□ 0.97
PTPRU-206ENST00000465525 GPSM2P81274 684 aa21.12■□□□□ 0.97
PTPRU-206ENST00000465525 PUM3Q15397 648 aaKnown RBP21.12■□□□□ 0.97
PTPRU-206ENST00000465525 C7orf43Q8WVR3 580 aa21.12■□□□□ 0.97
PTPRU-206ENST00000465525 ANKIB1Q9P2G1 1089 aa21.12■□□□□ 0.97
PTPRU-206ENST00000465525 BRCA1P38398 1863 aaKnown RBP21.11■□□□□ 0.97
PTPRU-206ENST00000465525 FGFR2P21802 821 aa21.1■□□□□ 0.97
PTPRU-206ENST00000465525 CC2D2BQ6DHV5 1058 aa21.1■□□□□ 0.97
PTPRU-206ENST00000465525 XAGE2Q96GT9 111 aa21.1■□□□□ 0.97
PTPRU-206ENST00000465525 ANKRD2Q9GZV1 360 aa21.1■□□□□ 0.97
PTPRU-206ENST00000465525 BCS1LQ9Y276 419 aa21.1■□□□□ 0.97
PTPRU-206ENST00000465525 KCNJ4P48050 445 aa21.09■□□□□ 0.97
PTPRU-206ENST00000465525 LTBP1Q14766 1721 aa21.09■□□□□ 0.97
PTPRU-206ENST00000465525 GPR101Q96P66 508 aaPredicted RBP21.09■□□□□ 0.97
PTPRU-206ENST00000465525 NSFL1CQ9UNZ2 370 aaKnown RBP21.09■□□□□ 0.97
PTPRU-206ENST00000465525 C21orf2O43822 256 aa21.09■□□□□ 0.97
PTPRU-206ENST00000465525 SLC5A1P13866 664 aa21.09■□□□□ 0.97
PTPRU-206ENST00000465525 KLRK1P26718 216 aa21.09■□□□□ 0.97
PTPRU-206ENST00000465525 LPIN2Q92539 896 aa21.09■□□□□ 0.97
PTPRU-206ENST00000465525 XDHP47989 1333 aa21.08■□□□□ 0.97
PTPRU-206ENST00000465525 GRIPAP1Q4V328 841 aa21.08■□□□□ 0.96
PTPRU-206ENST00000465525 GORABQ5T7V8 394 aa21.08■□□□□ 0.96
PTPRU-206ENST00000465525 SOGA3Q5TF21 947 aa21.08■□□□□ 0.96
PTPRU-206ENST00000465525 ECHDC1Q9NTX5 307 aa21.08■□□□□ 0.96
PTPRU-206ENST00000465525 STAP2Q9UGK3 403 aa21.08■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms