RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 ANKRD2Q9GZV1 360 aa21.16■□□□□ 0.98
USP39-211ENST00000465282 FBXO3Q9UK99 471 aa21.16■□□□□ 0.98
USP39-211ENST00000465282 NSFL1CQ9UNZ2 370 aaKnown RBP21.16■□□□□ 0.98
USP39-211ENST00000465282 XDHP47989 1333 aa21.15■□□□□ 0.98
USP39-211ENST00000465282 ZC3H4Q9UPT8 1303 aaKnown RBP21.15■□□□□ 0.98
USP39-211ENST00000465282 RASSF7Q02833 373 aa21.15■□□□□ 0.98
USP39-211ENST00000465282 C20orf194Q5TEA3 1177 aa21.14■□□□□ 0.97
USP39-211ENST00000465282 CNNM1Q9NRU3 951 aa21.14■□□□□ 0.97
USP39-211ENST00000465282 ANKIB1Q9P2G1 1089 aa21.14■□□□□ 0.97
USP39-211ENST00000465282 IARSP41252 1262 aaKnown RBP21.13■□□□□ 0.97
USP39-211ENST00000465282 GPSM2P81274 684 aa21.13■□□□□ 0.97
USP39-211ENST00000465282 C9orf131Q5VYM1 1079 aa21.13■□□□□ 0.97
USP39-211ENST00000465282 ZBTB40Q9NUA8 1239 aa21.13■□□□□ 0.97
USP39-211ENST00000465282 RNF181Q9P0P0 153 aa21.13■□□□□ 0.97
USP39-211ENST00000465282 A0A1B0GUL6 1792 aa21.13■□□□□ 0.97
USP39-211ENST00000465282 DUOX1Q9NRD9 1551 aa21.12■□□□□ 0.97
USP39-211ENST00000465282 SRGAP3O43295 1099 aa21.12■□□□□ 0.97
USP39-211ENST00000465282 ATP2B4P23634 1241 aa21.12■□□□□ 0.97
USP39-211ENST00000465282 RFX5P48382 616 aaPredicted RBP21.12■□□□□ 0.97
USP39-211ENST00000465282 ZNF594Q96JF6 807 aaPredicted RBP21.12■□□□□ 0.97
USP39-211ENST00000465282 EYA3Q99504 573 aa21.12■□□□□ 0.97
USP39-211ENST00000465282 ZNF277Q9NRM2 450 aaPredicted RBP21.12■□□□□ 0.97
USP39-211ENST00000465282 GGA1Q9UJY5 639 aa21.12■□□□□ 0.97
USP39-211ENST00000465282 LEMD3Q9Y2U8 911 aa21.12■□□□□ 0.97
USP39-211ENST00000465282 MROH5Q6ZUA9 1318 aa21.11■□□□□ 0.97
USP39-211ENST00000465282 PTPN12Q05209 780 aaKnown RBP21.11■□□□□ 0.97
USP39-211ENST00000465282 CHRNDQ07001 517 aa21.11■□□□□ 0.97
USP39-211ENST00000465282 TBC1D16Q8TBP0 767 aa21.11■□□□□ 0.97
USP39-211ENST00000465282 COPRSQ9NQ92 184 aa21.11■□□□□ 0.97
USP39-211ENST00000465282 RIPOR2Q9Y4F9 1068 aa21.11■□□□□ 0.97
USP39-211ENST00000465282 TIAM2Q8IVF5 1701 aa21.1■□□□□ 0.97
USP39-211ENST00000465282 C6orf229H3BNL8 230 aa21.1■□□□□ 0.97
USP39-211ENST00000465282 CIAO1O76071 339 aa21.1■□□□□ 0.97
USP39-211ENST00000465282 PRELPP51888 382 aa21.1■□□□□ 0.97
USP39-211ENST00000465282 ATP8B2P98198 1209 aa21.1■□□□□ 0.97
USP39-211ENST00000465282 POLLQ9UGP5 575 aa21.1■□□□□ 0.97
USP39-211ENST00000465282 KIAA2012Q0VF49 1180 aa21.09■□□□□ 0.97
USP39-211ENST00000465282 WASHC4Q2M389 1173 aa21.09■□□□□ 0.97
USP39-211ENST00000465282 SLC51AQ86UW1 340 aa21.09■□□□□ 0.97
USP39-211ENST00000465282 RPAP2Q8IXW5 612 aaPredicted RBP21.09■□□□□ 0.97
USP39-211ENST00000465282 JDP2Q8WYK2 163 aa21.09■□□□□ 0.97
USP39-211ENST00000465282 EYA2O00167 538 aa21.08■□□□□ 0.97
USP39-211ENST00000465282 PPIP5K2O43314 1243 aa21.08■□□□□ 0.97
USP39-211ENST00000465282 UFL1O94874 794 aa21.08■□□□□ 0.97
USP39-211ENST00000465282 AAMPQ13685 434 aa21.08■□□□□ 0.97
USP39-211ENST00000465282 LARGE2Q8N3Y3 721 aa21.08■□□□□ 0.97
USP39-211ENST00000465282 SSH3Q8TE77 659 aa21.08■□□□□ 0.97
USP39-211ENST00000465282 ZC3H12CQ9C0D7 883 aaKnown RBP21.08■□□□□ 0.97
USP39-211ENST00000465282 SUPT16HQ9Y5B9 1047 aaKnown RBP21.08■□□□□ 0.97
USP39-211ENST00000465282 C1orf115Q9H7X2 142 aa21.07■□□□□ 0.96
USP39-211ENST00000465282 ZNF804BA4D1E1 1349 aa21.06■□□□□ 0.96
USP39-211ENST00000465282 PNMA6EA0A0J9YXQ4 647 aa21.06■□□□□ 0.96
USP39-211ENST00000465282 YY1P25490 414 aa21.06■□□□□ 0.96
USP39-211ENST00000465282 IL15P40933 162 aaPredicted RBP21.06■□□□□ 0.96
USP39-211ENST00000465282 KCNJ4P48050 445 aa21.06■□□□□ 0.96
USP39-211ENST00000465282 POLA2Q14181 598 aa21.06■□□□□ 0.96
USP39-211ENST00000465282 CEP85Q6P2H3 762 aa21.06■□□□□ 0.96
USP39-211ENST00000465282 KLHDC4Q8TBB5 520 aa21.06■□□□□ 0.96
USP39-211ENST00000465282 PUS3Q9BZE2 481 aaKnown RBP21.06■□□□□ 0.96
USP39-211ENST00000465282 MED23Q9ULK4 1368 aa21.06■□□□□ 0.96
USP39-211ENST00000465282 UBE4AQ14139 1066 aa21.05■□□□□ 0.96
USP39-211ENST00000465282 AOC3Q16853 763 aa21.05■□□□□ 0.96
USP39-211ENST00000465282 LRRC24Q50LG9 513 aa21.05■□□□□ 0.96
USP39-211ENST00000465282 METTL24Q5JXM2 366 aa21.05■□□□□ 0.96
USP39-211ENST00000465282 NIM1KQ8IY84 436 aa21.05■□□□□ 0.96
USP39-211ENST00000465282 FZD9O00144 591 aa21.04■□□□□ 0.96
USP39-211ENST00000465282 HMMRO75330 724 aa21.04■□□□□ 0.96
USP39-211ENST00000465282 PDE8BO95263 885 aa21.04■□□□□ 0.96
USP39-211ENST00000465282 C15orf52Q6ZUT6 534 aaKnown RBP21.04■□□□□ 0.96
USP39-211ENST00000465282 ATG9AQ7Z3C6 839 aa21.04■□□□□ 0.96
USP39-211ENST00000465282 TAF5LO75529 589 aa21.03■□□□□ 0.96
USP39-211ENST00000465282 DPY19L2Q6NUT2 758 aa21.03■□□□□ 0.96
USP39-211ENST00000465282 HELBQ8NG08 1087 aaPredicted RBP21.03■□□□□ 0.96
USP39-211ENST00000465282 SIL1Q9H173 461 aa21.03■□□□□ 0.96
USP39-211ENST00000465282 ZNRF3Q9ULT6 936 aa21.03■□□□□ 0.96
USP39-211ENST00000465282 G3BP1Q13283 466 aaKnown RBP eCLIP21.02■□□□□ 0.96
USP39-211ENST00000465282 VGLL2Q8N8G2 317 aa21.02■□□□□ 0.96
USP39-211ENST00000465282 CEP126Q9P2H0 1117 aa21.02■□□□□ 0.96
USP39-211ENST00000465282 PA2G4Q9UQ80 394 aaKnown RBP21.02■□□□□ 0.96
USP39-211ENST00000465282 NOP58Q9Y2X3 529 aaKnown RBP21.02■□□□□ 0.96
USP39-211ENST00000465282 G3V3G9 751 aa21.01■□□□□ 0.95
USP39-211ENST00000465282 RIMBP2O15034 1052 aa21.01■□□□□ 0.95
USP39-211ENST00000465282 EIF6P56537 245 aaKnown RBP21.01■□□□□ 0.95
USP39-211ENST00000465282 DCAF8Q5TAQ9 597 aa21.01■□□□□ 0.95
USP39-211ENST00000465282 CRBNQ96SW2 442 aa21.01■□□□□ 0.95
USP39-211ENST00000465282 COL4A5P29400 1685 aa21.01■□□□□ 0.95
USP39-211ENST00000465282 GLTPD2A6NH11 291 aa21■□□□□ 0.95
USP39-211ENST00000465282 PUM3Q15397 648 aaKnown RBP21■□□□□ 0.95
USP39-211ENST00000465282 PODNQ7Z5L7 613 aa21■□□□□ 0.95
USP39-211ENST00000465282 KDM2BQ8NHM5 1336 aa21■□□□□ 0.95
USP39-211ENST00000465282 HSP90AB4PQ58FF6 505 aa20.99■□□□□ 0.95
USP39-211ENST00000465282 COA1Q9GZY4 146 aa20.99■□□□□ 0.95
USP39-211ENST00000465282 PSME4Q14997 1843 aa20.99■□□□□ 0.95
USP39-211ENST00000465282 SURF6O75683 361 aaKnown RBP20.98■□□□□ 0.95
USP39-211ENST00000465282 GPR101Q96P66 508 aaPredicted RBP20.98■□□□□ 0.95
USP39-211ENST00000465282 AKAP2Q9Y2D5 859 aa20.98■□□□□ 0.95
USP39-211ENST00000465282 IRS2Q9Y4H2 1338 aa20.98■□□□□ 0.95
USP39-211ENST00000465282 WTIPA6NIX2 430 aaPredicted RBP20.97■□□□□ 0.95
USP39-211ENST00000465282 ECE2O60344 883 aa20.97■□□□□ 0.95
USP39-211ENST00000465282 FGFR2P21802 821 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms