RNA–Protein interactions for RNA: ENST00000465245.1

TRA2B-208, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-208ENST00000465245 FAM89AQ96GI7 184 aa15.75■□□□□ 0.11
TRA2B-208ENST00000465245 PAPPA2Q9BXP8 1791 aa15.75■□□□□ 0.11
TRA2B-208ENST00000465245 CTU1Q7Z7A3 348 aaKnown RBP15.74■□□□□ 0.11
TRA2B-208ENST00000465245 CDCA5Q96FF9 252 aa15.74■□□□□ 0.11
TRA2B-208ENST00000465245 CSRNP1Q96S65 589 aa15.74■□□□□ 0.11
TRA2B-208ENST00000465245 LMOD3Q0VAK6 560 aa15.73■□□□□ 0.11
TRA2B-208ENST00000465245 SF3B3Q15393 1217 aaKnown RBP15.73■□□□□ 0.11
TRA2B-208ENST00000465245 TBC1D16Q8TBP0 767 aa15.73■□□□□ 0.11
TRA2B-208ENST00000465245 CHPF2Q9P2E5 772 aa15.73■□□□□ 0.11
TRA2B-208ENST00000465245 ASTN2O75129 1339 aaPredicted RBP15.72■□□□□ 0.11
TRA2B-208ENST00000465245 G3V3G9 751 aa15.72■□□□□ 0.11
TRA2B-208ENST00000465245 VIL1P09327 827 aaKnown RBP15.72■□□□□ 0.11
TRA2B-208ENST00000465245 RTL5Q5HYW3 569 aaPredicted RBP15.72■□□□□ 0.11
TRA2B-208ENST00000465245 DCAF8Q5TAQ9 597 aa15.72■□□□□ 0.11
TRA2B-208ENST00000465245 PRPF38BQ5VTL8 546 aaKnown RBP15.72■□□□□ 0.11
TRA2B-208ENST00000465245 RASAL3Q86YV0 1011 aa15.72■□□□□ 0.11
TRA2B-208ENST00000465245 REM2Q8IYK8 340 aaPredicted RBP15.72■□□□□ 0.11
TRA2B-208ENST00000465245 PLBD2Q8NHP8 589 aa15.72■□□□□ 0.11
TRA2B-208ENST00000465245 ZC3H12CQ9C0D7 883 aaKnown RBP15.72■□□□□ 0.11
TRA2B-208ENST00000465245 ATP5J2-PTCD1G3V325 749 aa15.71■□□□□ 0.11
TRA2B-208ENST00000465245 KRT24Q2M2I5 525 aa15.71■□□□□ 0.11
TRA2B-208ENST00000465245 ISCA1Q9BUE6 129 aa15.71■□□□□ 0.11
TRA2B-208ENST00000465245 ZNF609O15014 1411 aa15.7■□□□□ 0.1
TRA2B-208ENST00000465245 IRS4O14654 1257 aaPredicted RBP15.7■□□□□ 0.1
TRA2B-208ENST00000465245 UFL1O94874 794 aa15.7■□□□□ 0.1
TRA2B-208ENST00000465245 TMPOP42166 694 aaKnown RBP15.7■□□□□ 0.1
TRA2B-208ENST00000465245 RPS8P62241 208 aaKnown RBP15.7■□□□□ 0.1
TRA2B-208ENST00000465245 HDGFL1Q5TGJ6 251 aa15.7■□□□□ 0.1
TRA2B-208ENST00000465245 ANGEL2Q5VTE6 544 aaKnown RBP15.7■□□□□ 0.1
TRA2B-208ENST00000465245 ANKRD13DQ6ZTN6 518 aa15.7■□□□□ 0.1
TRA2B-208ENST00000465245 SCARF1Q14162 830 aa15.69■□□□□ 0.1
TRA2B-208ENST00000465245 PODXL2Q9NZ53 605 aa15.69■□□□□ 0.1
TRA2B-208ENST00000465245 ANKIB1Q9P2G1 1089 aa15.69■□□□□ 0.1
TRA2B-208ENST00000465245 HPS5Q9UPZ3 1129 aa15.69■□□□□ 0.1
TRA2B-208ENST00000465245 FKBP1BP68106 108 aa15.68■□□□□ 0.1
TRA2B-208ENST00000465245 RSBN1LQ6PCB5 846 aaPredicted RBP15.68■□□□□ 0.1
TRA2B-208ENST00000465245 AGBL3Q8NEM8 1001 aa15.68■□□□□ 0.1
TRA2B-208ENST00000465245 GGA1Q9UJY5 639 aa15.68■□□□□ 0.1
TRA2B-208ENST00000465245 HDAC9Q9UKV0 1011 aa15.68■□□□□ 0.1
TRA2B-208ENST00000465245 LAS1LQ9Y4W2 734 aaKnown RBP15.68■□□□□ 0.1
TRA2B-208ENST00000465245 SPEF2Q9C093 1822 aa15.68■□□□□ 0.1
TRA2B-208ENST00000465245 ZNF280AP59817 542 aaPredicted RBP15.67■□□□□ 0.1
TRA2B-208ENST00000465245 NEUROD2Q15784 382 aa15.67■□□□□ 0.1
TRA2B-208ENST00000465245 DBF4Q9UBU7 674 aaPredicted RBP15.67■□□□□ 0.1
TRA2B-208ENST00000465245 PITPNM2Q9BZ72 1349 aa15.67■□□□□ 0.1
TRA2B-208ENST00000465245 CHL1O00533 1208 aa15.66■□□□□ 0.1
TRA2B-208ENST00000465245 HOXB7P09629 217 aa15.66■□□□□ 0.1
TRA2B-208ENST00000465245 PKN2Q16513 984 aaKnown RBP15.66■□□□□ 0.1
TRA2B-208ENST00000465245 ZNF296Q8WUU4 475 aaPredicted RBP15.66■□□□□ 0.1
TRA2B-208ENST00000465245 MYOZ2Q9NPC6 264 aa15.66■□□□□ 0.1
TRA2B-208ENST00000465245 SEC31BQ9NQW1 1179 aa15.66■□□□□ 0.1
TRA2B-208ENST00000465245 ZNF646O15015 1829 aaPredicted RBP15.66■□□□□ 0.1
TRA2B-208ENST00000465245 MYH3P11055 1940 aa15.65■□□□□ 0.1
TRA2B-208ENST00000465245 TBC1D8O95759 1140 aa15.65■□□□□ 0.1
TRA2B-208ENST00000465245 TRIM28Q13263 835 aaKnown RBP15.65■□□□□ 0.1
TRA2B-208ENST00000465245 MOB2Q70IA6 237 aa15.65■□□□□ 0.1
TRA2B-208ENST00000465245 HYPKQ9NX55 129 aa15.65■□□□□ 0.1
TRA2B-208ENST00000465245 HTTP42858 3142 aa15.64■□□□□ 0.09
TRA2B-208ENST00000465245 USP17L8P0C7I0 530 aa15.64■□□□□ 0.09
TRA2B-208ENST00000465245 HSP90B1P14625 803 aaKnown RBP15.64■□□□□ 0.09
TRA2B-208ENST00000465245 ZBTB38Q8NAP3 1195 aaPredicted RBP15.64■□□□□ 0.09
TRA2B-208ENST00000465245 SCAF8Q9UPN6 1271 aaKnown RBP15.64■□□□□ 0.09
TRA2B-208ENST00000465245 MKI67P46013 3256 aaKnown RBP15.64■□□□□ 0.09
TRA2B-208ENST00000465245 UBE2Q2LH0YL09 131 aa15.63■□□□□ 0.09
TRA2B-208ENST00000465245 GOLGA2Q08379 1002 aa15.63■□□□□ 0.09
TRA2B-208ENST00000465245 TTLL12Q14166 644 aaPredicted RBP15.63■□□□□ 0.09
TRA2B-208ENST00000465245 CCDC152Q4G0S7 254 aa15.63■□□□□ 0.09
TRA2B-208ENST00000465245 RIC3Q7Z5B4 369 aa15.63■□□□□ 0.09
TRA2B-208ENST00000465245 CCDC146Q8IYE0 955 aa15.63■□□□□ 0.09
TRA2B-208ENST00000465245 GMLQ99445 158 aa15.63■□□□□ 0.09
TRA2B-208ENST00000465245 CENPFP49454 3210 aa15.63■□□□□ 0.09
TRA2B-208ENST00000465245 XDHP47989 1333 aa15.63■□□□□ 0.09
TRA2B-208ENST00000465245 USP17L3A6NCW0 530 aa15.62■□□□□ 0.09
TRA2B-208ENST00000465245 USP17L4A6NCW7 530 aa15.62■□□□□ 0.09
TRA2B-208ENST00000465245 PRAMEF18Q5VWM3 479 aa15.62■□□□□ 0.09
TRA2B-208ENST00000465245 USP17L1Q7RTZ2 530 aa15.62■□□□□ 0.09
TRA2B-208ENST00000465245 CCDC85AQ96PX6 553 aaPredicted RBP15.62■□□□□ 0.09
TRA2B-208ENST00000465245 TRIM35Q9UPQ4 493 aa15.62■□□□□ 0.09
TRA2B-208ENST00000465245 GPR25O00155 361 aa15.61■□□□□ 0.09
TRA2B-208ENST00000465245 PDE8AO60658 829 aa15.61■□□□□ 0.09
TRA2B-208ENST00000465245 NF2P35240 595 aa15.61■□□□□ 0.09
TRA2B-208ENST00000465245 MKRN3Q13064 507 aaKnown RBP15.61■□□□□ 0.09
TRA2B-208ENST00000465245 FBXO46Q6PJ61 603 aaPredicted RBP15.61■□□□□ 0.09
TRA2B-208ENST00000465245 PODNQ7Z5L7 613 aa15.61■□□□□ 0.09
TRA2B-208ENST00000465245 TM4SF4P48230 202 aa15.6■□□□□ 0.09
TRA2B-208ENST00000465245 SREBF2Q12772 1141 aa15.6■□□□□ 0.09
TRA2B-208ENST00000465245 NBPF9Q3BBW0 867 aa15.6■□□□□ 0.09
TRA2B-208ENST00000465245 NOM1Q5C9Z4 860 aaKnown RBP15.6■□□□□ 0.09
TRA2B-208ENST00000465245 DUSP27Q5VZP5 1158 aa15.6■□□□□ 0.09
TRA2B-208ENST00000465245 ANKRD18AQ8IVF6 992 aa15.6■□□□□ 0.09
TRA2B-208ENST00000465245 MYD88Q99836 296 aa15.6■□□□□ 0.09
TRA2B-208ENST00000465245 PCCAP05165 728 aaPredicted RBP15.59■□□□□ 0.09
TRA2B-208ENST00000465245 ATP2B4P23634 1241 aa15.59■□□□□ 0.09
TRA2B-208ENST00000465245 OGFOD1Q8N543 542 aa15.59■□□□□ 0.09
TRA2B-208ENST00000465245 CCDC191Q8NCU4 936 aa15.59■□□□□ 0.09
TRA2B-208ENST00000465245 FBXW7Q969H0 707 aa15.59■□□□□ 0.09
TRA2B-208ENST00000465245 MED23Q9ULK4 1368 aa15.59■□□□□ 0.09
TRA2B-208ENST00000465245 WNT10BO00744 389 aa15.58■□□□□ 0.08
TRA2B-208ENST00000465245 FKTNO75072 461 aa15.58■□□□□ 0.08
TRA2B-208ENST00000465245 RALBP1Q15311 655 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms