RNA–Protein interactions for RNA: ENST00000464812.1

NUDCD3-204, Transcript of NudC domain containing 3, humanhuman

TSL 5

Gene NUDCD3, Length 811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-204ENST00000464812 YY1P25490 414 aa11.16□□□□□ -0.62
NUDCD3-204ENST00000464812 CCDC152Q4G0S7 254 aa11.16□□□□□ -0.62
NUDCD3-204ENST00000464812 ZNF784Q8NCA9 323 aaPredicted RBP11.16□□□□□ -0.62
NUDCD3-204ENST00000464812 PUS3Q9BZE2 481 aaKnown RBP11.16□□□□□ -0.62
NUDCD3-204ENST00000464812 SIL1Q9H173 461 aa11.16□□□□□ -0.62
NUDCD3-204ENST00000464812 COPRSQ9NQ92 184 aa11.16□□□□□ -0.62
NUDCD3-204ENST00000464812 HDAC5Q9UQL6 1122 aa11.16□□□□□ -0.62
NUDCD3-204ENST00000464812 DUOX1Q9NRD9 1551 aa11.16□□□□□ -0.62
NUDCD3-204ENST00000464812 H0YIN7 160 aa11.15□□□□□ -0.62
NUDCD3-204ENST00000464812 GRIN3BO60391 1043 aa11.15□□□□□ -0.62
NUDCD3-204ENST00000464812 HMMRO75330 724 aa11.15□□□□□ -0.62
NUDCD3-204ENST00000464812 HOXA10P31260 410 aaPredicted RBP11.15□□□□□ -0.62
NUDCD3-204ENST00000464812 PDE6BP35913 854 aa11.15□□□□□ -0.62
NUDCD3-204ENST00000464812 IFIT5Q13325 482 aaKnown RBP11.15□□□□□ -0.62
NUDCD3-204ENST00000464812 LRRC24Q50LG9 513 aa11.15□□□□□ -0.62
NUDCD3-204ENST00000464812 STYK1Q6J9G0 422 aa11.15□□□□□ -0.62
NUDCD3-204ENST00000464812 PRPF40BQ6NWY9 871 aaKnown RBP11.15□□□□□ -0.62
NUDCD3-204ENST00000464812 CENPQQ7L2Z9 268 aaPredicted RBP11.15□□□□□ -0.62
NUDCD3-204ENST00000464812 ATG9AQ7Z3C6 839 aa11.15□□□□□ -0.62
NUDCD3-204ENST00000464812 TTLL6Q8N841 843 aa11.15□□□□□ -0.62
NUDCD3-204ENST00000464812 CELF1Q92879 486 aaKnown RBP11.15□□□□□ -0.62
NUDCD3-204ENST00000464812 NLRP3Q96P20 1036 aa11.15□□□□□ -0.62
NUDCD3-204ENST00000464812 RWDD1Q9H446 243 aaPredicted RBP11.15□□□□□ -0.62
NUDCD3-204ENST00000464812 DCTPP1Q9H773 170 aa11.15□□□□□ -0.62
NUDCD3-204ENST00000464812 NOP58Q9Y2X3 529 aaKnown RBP11.15□□□□□ -0.62
NUDCD3-204ENST00000464812 ANKRD18BA2A2Z9 1011 aa11.14□□□□□ -0.63
NUDCD3-204ENST00000464812 APBB1O00213 710 aa11.14□□□□□ -0.63
NUDCD3-204ENST00000464812 C21orf2O43822 256 aa11.14□□□□□ -0.63
NUDCD3-204ENST00000464812 SMARCA5O60264 1052 aaPredicted RBP11.14□□□□□ -0.63
NUDCD3-204ENST00000464812 CCDC57Q2TAC2 916 aa11.14□□□□□ -0.63
NUDCD3-204ENST00000464812 ZNF622Q969S3 477 aaKnown RBP eCLIP11.14□□□□□ -0.634e-11■□□□□ 11.1
NUDCD3-204ENST00000464812 MASTLQ96GX5 879 aa11.14□□□□□ -0.63
NUDCD3-204ENST00000464812 ZNF609O15014 1411 aa11.14□□□□□ -0.63
NUDCD3-204ENST00000464812 TIAM2Q8IVF5 1701 aa11.14□□□□□ -0.63
NUDCD3-204ENST00000464812 MYH13Q9UKX3 1938 aa11.13□□□□□ -0.63
NUDCD3-204ENST00000464812 DICER1Q9UPY3 1922 aaKnown RBP11.13□□□□□ -0.63
NUDCD3-204ENST00000464812 SURF6O75683 361 aaKnown RBP11.13□□□□□ -0.63
NUDCD3-204ENST00000464812 SASH1O94885 1247 aa11.13□□□□□ -0.63
NUDCD3-204ENST00000464812 HSP90B1P14625 803 aaKnown RBP11.13□□□□□ -0.63
NUDCD3-204ENST00000464812 ARHGAP27Q6ZUM4 889 aa11.13□□□□□ -0.63
NUDCD3-204ENST00000464812 AK9Q5TCS8 1911 aa11.12□□□□□ -0.63
NUDCD3-204ENST00000464812 EYA2O00167 538 aa11.12□□□□□ -0.63
NUDCD3-204ENST00000464812 NPR1P16066 1061 aa11.12□□□□□ -0.63
NUDCD3-204ENST00000464812 PDE4AP27815 886 aa11.12□□□□□ -0.63
NUDCD3-204ENST00000464812 VGLL2Q8N8G2 317 aa11.12□□□□□ -0.63
NUDCD3-204ENST00000464812 GCC1Q96CN9 775 aa11.12□□□□□ -0.63
NUDCD3-204ENST00000464812 PDZRN3Q9UPQ7 1066 aa11.12□□□□□ -0.63
NUDCD3-204ENST00000464812 ZNF646O15015 1829 aaPredicted RBP11.12□□□□□ -0.63
NUDCD3-204ENST00000464812 CIAO1O76071 339 aa11.11□□□□□ -0.63
NUDCD3-204ENST00000464812 TFCP2Q12800 502 aa11.11□□□□□ -0.63
NUDCD3-204ENST00000464812 GRAPQ13588 217 aa11.11□□□□□ -0.63
NUDCD3-204ENST00000464812 TAF7LQ5H9L4 462 aa11.11□□□□□ -0.63
NUDCD3-204ENST00000464812 C9orf131Q5VYM1 1079 aa11.11□□□□□ -0.63
NUDCD3-204ENST00000464812 DDX46Q7L014 1031 aaKnown RBP11.11□□□□□ -0.63
NUDCD3-204ENST00000464812 GRAPLQ8TC17 118 aaPredicted RBP11.11□□□□□ -0.63
NUDCD3-204ENST00000464812 RHPN1Q8TCX5 695 aa11.11□□□□□ -0.63
NUDCD3-204ENST00000464812 OTUD7AQ8TE49 926 aaPredicted RBP11.11□□□□□ -0.63
NUDCD3-204ENST00000464812 RPGRQ92834 1020 aaKnown RBP11.11□□□□□ -0.63
NUDCD3-204ENST00000464812 LNPKQ9C0E8 428 aa11.11□□□□□ -0.63
NUDCD3-204ENST00000464812 RIPOR2Q9Y4F9 1068 aa11.11□□□□□ -0.63
NUDCD3-204ENST00000464812 AKAP11Q9UKA4 1901 aa11.11□□□□□ -0.63
NUDCD3-204ENST00000464812 NUCB1Q02818 461 aa11.1□□□□□ -0.63
NUDCD3-204ENST00000464812 ANKRD18AQ8IVF6 992 aa11.1□□□□□ -0.63
NUDCD3-204ENST00000464812 CDC5LQ99459 802 aaKnown RBP11.1□□□□□ -0.63
NUDCD3-204ENST00000464812 IL1RAPL2Q9NP60 686 aa11.1□□□□□ -0.63
NUDCD3-204ENST00000464812 MYO5AQ9Y4I1 1855 aaKnown RBP11.1□□□□□ -0.63
NUDCD3-204ENST00000464812 SALL3Q9BXA9 1300 aa11.09□□□□□ -0.63
NUDCD3-204ENST00000464812 WTIPA6NIX2 430 aaPredicted RBP11.09□□□□□ -0.63
NUDCD3-204ENST00000464812 SNAP23O00161 211 aa11.09□□□□□ -0.63
NUDCD3-204ENST00000464812 RAB11FIP3O75154 756 aa11.09□□□□□ -0.63
NUDCD3-204ENST00000464812 IGHMBP2P38935 993 aaKnown RBP11.09□□□□□ -0.63
NUDCD3-204ENST00000464812 IL15P40933 162 aaPredicted RBP11.09□□□□□ -0.63
NUDCD3-204ENST00000464812 RPS8P62241 208 aaKnown RBP11.09□□□□□ -0.63
NUDCD3-204ENST00000464812 G3BP1Q13283 466 aaKnown RBP eCLIP11.09□□□□□ -0.63
NUDCD3-204ENST00000464812 OS9Q13438 667 aaPredicted RBP11.09□□□□□ -0.63
NUDCD3-204ENST00000464812 ANKRD45Q5TZF3 282 aa11.09□□□□□ -0.63
NUDCD3-204ENST00000464812 LDHAL6AQ6ZMR3 332 aa11.09□□□□□ -0.63
NUDCD3-204ENST00000464812 CHD1LQ86WJ1 897 aa11.09□□□□□ -0.63
NUDCD3-204ENST00000464812 C16orf71Q8IYS4 520 aaPredicted RBP11.09□□□□□ -0.63
NUDCD3-204ENST00000464812 HELBQ8NG08 1087 aaPredicted RBP11.09□□□□□ -0.63
NUDCD3-204ENST00000464812 CNKSR1Q969H4 720 aa11.09□□□□□ -0.63
NUDCD3-204ENST00000464812 RBM17Q96I25 401 aaKnown RBP11.09□□□□□ -0.63
NUDCD3-204ENST00000464812 CRAMP1Q96RY5 1269 aa11.09□□□□□ -0.63
NUDCD3-204ENST00000464812 LRRCC1Q9C099 1032 aa11.09□□□□□ -0.63
NUDCD3-204ENST00000464812 CNNM1Q9NRU3 951 aa11.09□□□□□ -0.63
NUDCD3-204ENST00000464812 TLR7Q9NYK1 1049 aaKnown RBP11.09□□□□□ -0.63
NUDCD3-204ENST00000464812 LTBP3Q9NS15 1303 aa11.09□□□□□ -0.63
NUDCD3-204ENST00000464812 PPEF1O14829 653 aaPredicted RBP11.08□□□□□ -0.64
NUDCD3-204ENST00000464812 CHRNDQ07001 517 aa11.08□□□□□ -0.64
NUDCD3-204ENST00000464812 ERC1Q8IUD2 1116 aa11.08□□□□□ -0.64
NUDCD3-204ENST00000464812 KIF1BPQ96EK5 621 aa11.08□□□□□ -0.64
NUDCD3-204ENST00000464812 BCL11AQ9H165 835 aa11.08□□□□□ -0.64
NUDCD3-204ENST00000464812 BSDC1Q9NW68 430 aaPredicted RBP11.08□□□□□ -0.64
NUDCD3-204ENST00000464812 FBXO3Q9UK99 471 aa11.08□□□□□ -0.64
NUDCD3-204ENST00000464812 MINPP1Q9UNW1 487 aa11.08□□□□□ -0.64
NUDCD3-204ENST00000464812 POTECB2RU33 542 aa11.07□□□□□ -0.64
NUDCD3-204ENST00000464812 TAF5LO75529 589 aa11.07□□□□□ -0.64
NUDCD3-204ENST00000464812 HSP90AB4PQ58FF6 505 aa11.07□□□□□ -0.64
NUDCD3-204ENST00000464812 METTL24Q5JXM2 366 aa11.07□□□□□ -0.64
NUDCD3-204ENST00000464812 EAF2Q96CJ1 260 aaPredicted RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms