RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 MCTP1Q6DN14 999 aa4.35□□□□□ -1.71
COL8A1-205ENST00000463753 SYT10Q6XYQ8 523 aa4.35□□□□□ -1.71
COL8A1-205ENST00000463753 ZNF513Q8N8E2 541 aaPredicted RBP4.35□□□□□ -1.71
COL8A1-205ENST00000463753 ANKRD7Q92527 254 aa4.35□□□□□ -1.71
COL8A1-205ENST00000463753 GOPCQ9HD26 462 aa4.35□□□□□ -1.71
COL8A1-205ENST00000463753 CTNNA3Q9UI47 895 aa4.35□□□□□ -1.71
COL8A1-205ENST00000463753 USP6P35125 1406 aa4.34□□□□□ -1.71
COL8A1-205ENST00000463753 MYOM3Q5VTT5 1437 aa4.34□□□□□ -1.71
COL8A1-205ENST00000463753 ACTN4O43707 911 aaKnown RBP4.34□□□□□ -1.71
COL8A1-205ENST00000463753 IGHDP01880 384 aa4.34□□□□□ -1.71
COL8A1-205ENST00000463753 SSFA2P28290 1259 aa4.34□□□□□ -1.71
COL8A1-205ENST00000463753 CASQ1P31415 396 aa4.34□□□□□ -1.71
COL8A1-205ENST00000463753 MDM2Q00987 491 aaPredicted RBP4.34□□□□□ -1.71
COL8A1-205ENST00000463753 PSME1Q06323 249 aa4.34□□□□□ -1.71
COL8A1-205ENST00000463753 LRCH2Q5VUJ6 765 aa4.34□□□□□ -1.71
COL8A1-205ENST00000463753 CEP120Q8N960 986 aa4.34□□□□□ -1.71
COL8A1-205ENST00000463753 NEK11Q8NG66 645 aa4.34□□□□□ -1.71
COL8A1-205ENST00000463753 PSMD1Q99460 953 aa4.34□□□□□ -1.71
COL8A1-205ENST00000463753 C22orf23Q9BZE7 217 aa4.34□□□□□ -1.71
COL8A1-205ENST00000463753 CXorf56Q9H5V9 222 aa4.34□□□□□ -1.71
COL8A1-205ENST00000463753 DIAPH3Q9NSV4 1193 aa4.34□□□□□ -1.71
COL8A1-205ENST00000463753 DDX41Q9UJV9 622 aaKnown RBP4.34□□□□□ -1.71
COL8A1-205ENST00000463753 RPGRIP1LQ68CZ1 1315 aa4.34□□□□□ -1.71
COL8A1-205ENST00000463753 SYCE3A1L190 88 aa4.34□□□□□ -1.72
COL8A1-205ENST00000463753 ZNF853P0CG23 659 aa4.34□□□□□ -1.72
COL8A1-205ENST00000463753 NCBP1Q09161 790 aaKnown RBP4.34□□□□□ -1.72
COL8A1-205ENST00000463753 KLHL40Q2TBA0 621 aa4.34□□□□□ -1.72
COL8A1-205ENST00000463753 CTR9Q6PD62 1173 aa4.34□□□□□ -1.72
COL8A1-205ENST00000463753 PRPF38AQ8NAV1 312 aaKnown RBP4.34□□□□□ -1.72
COL8A1-205ENST00000463753 PIBF1Q8WXW3 757 aa4.34□□□□□ -1.72
COL8A1-205ENST00000463753 DEF6Q9H4E7 631 aa4.34□□□□□ -1.72
COL8A1-205ENST00000463753 PRDM16Q9HAZ2 1276 aa4.34□□□□□ -1.72
COL8A1-205ENST00000463753 JRKLQ9Y4A0 524 aa4.34□□□□□ -1.72
COL8A1-205ENST00000463753 MPHOSPH10O00566 681 aaKnown RBP4.33□□□□□ -1.72
COL8A1-205ENST00000463753 SSTR3P32745 418 aaPredicted RBP4.33□□□□□ -1.72
COL8A1-205ENST00000463753 USP46P62068 366 aa4.33□□□□□ -1.72
COL8A1-205ENST00000463753 FBXO31Q5XUX0 539 aaPredicted RBP4.33□□□□□ -1.72
COL8A1-205ENST00000463753 KRBA2Q6ZNG9 492 aa4.33□□□□□ -1.72
COL8A1-205ENST00000463753 GOLGA6L1Q8N7Z2 621 aa4.33□□□□□ -1.72
COL8A1-205ENST00000463753 ABHD8Q96I13 439 aa4.33□□□□□ -1.72
COL8A1-205ENST00000463753 KDM4CQ9H3R0 1056 aa4.33□□□□□ -1.72
COL8A1-205ENST00000463753 DONSONQ9NYP3 566 aa4.33□□□□□ -1.72
COL8A1-205ENST00000463753 HCSTQ9UBK5 93 aa4.33□□□□□ -1.72
COL8A1-205ENST00000463753 LCMT1Q9UIC8 334 aa4.33□□□□□ -1.72
COL8A1-205ENST00000463753 C5P01031 1676 aa4.33□□□□□ -1.72
COL8A1-205ENST00000463753 SBF1O95248 1867 aa4.33□□□□□ -1.72
COL8A1-205ENST00000463753 KIF16BQ96L93 1317 aa4.33□□□□□ -1.72
COL8A1-205ENST00000463753 BTAF1O14981 1849 aa4.33□□□□□ -1.72
COL8A1-205ENST00000463753 TAF1LQ8IZX4 1826 aa4.33□□□□□ -1.72
COL8A1-205ENST00000463753 MYO1CO00159 1063 aa4.33□□□□□ -1.72
COL8A1-205ENST00000463753 ITGBL1O95965 494 aaPredicted RBP4.33□□□□□ -1.72
COL8A1-205ENST00000463753 HSPA1AP0DMV8 641 aaKnown RBP4.33□□□□□ -1.72
COL8A1-205ENST00000463753 HSPA1BP0DMV9 641 aaKnown RBP4.33□□□□□ -1.72
COL8A1-205ENST00000463753 KIF18AQ8NI77 898 aa4.33□□□□□ -1.72
COL8A1-205ENST00000463753 BRMS1Q9HCU9 246 aa4.33□□□□□ -1.72
COL8A1-205ENST00000463753 STK32BQ9NY57 414 aa4.33□□□□□ -1.72
COL8A1-205ENST00000463753 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.33□□□□□ -1.72
COL8A1-205ENST00000463753 V9GYY5 206 aaPredicted RBP4.33□□□□□ -1.72
COL8A1-205ENST00000463753 CNTNAP1P78357 1384 aa4.33□□□□□ -1.72
COL8A1-205ENST00000463753 SPATA31A1Q5TZJ5 1347 aa4.33□□□□□ -1.72
COL8A1-205ENST00000463753 MAPK8IP3Q9UPT6 1336 aa4.33□□□□□ -1.72
COL8A1-205ENST00000463753 CT47B1P0C2W7 299 aaPredicted RBP4.32□□□□□ -1.72
COL8A1-205ENST00000463753 RAB3GAP1Q15042 981 aa4.32□□□□□ -1.72
COL8A1-205ENST00000463753 RPAINQ86UA6 219 aa4.32□□□□□ -1.72
COL8A1-205ENST00000463753 CCDC191Q8NCU4 936 aa4.32□□□□□ -1.72
COL8A1-205ENST00000463753 GTF3C6Q969F1 213 aa4.32□□□□□ -1.72
COL8A1-205ENST00000463753 POLKQ9UBT6 870 aa4.32□□□□□ -1.72
COL8A1-205ENST00000463753 MORC2Q9Y6X9 1032 aaPredicted RBP4.32□□□□□ -1.72
COL8A1-205ENST00000463753 GOLGA8CPA6NN73 597 aa4.32□□□□□ -1.72
COL8A1-205ENST00000463753 NPHP1O15259 732 aa4.32□□□□□ -1.72
COL8A1-205ENST00000463753 BCAMP50895 628 aa4.32□□□□□ -1.72
COL8A1-205ENST00000463753 ZNF445P59923 1031 aa4.32□□□□□ -1.72
COL8A1-205ENST00000463753 PDE3BQ13370 1112 aa4.32□□□□□ -1.72
COL8A1-205ENST00000463753 FKBP5Q13451 457 aaPredicted RBP4.32□□□□□ -1.72
COL8A1-205ENST00000463753 TTLL5Q6EMB2 1281 aa4.32□□□□□ -1.72
COL8A1-205ENST00000463753 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.32□□□□□ -1.72
COL8A1-205ENST00000463753 ADGRB1O14514 1584 aa4.32□□□□□ -1.72
COL8A1-205ENST00000463753 PLEKHG3A1L390 1219 aa4.32□□□□□ -1.72
COL8A1-205ENST00000463753 POLR3GO15318 223 aaPredicted RBP4.32□□□□□ -1.72
COL8A1-205ENST00000463753 CYP2C19P33261 490 aa4.32□□□□□ -1.72
COL8A1-205ENST00000463753 SSR1P43307 286 aaKnown RBP4.32□□□□□ -1.72
COL8A1-205ENST00000463753 ANAPC15P60006 121 aa4.32□□□□□ -1.72
COL8A1-205ENST00000463753 DIXDC1Q155Q3 683 aa4.32□□□□□ -1.72
COL8A1-205ENST00000463753 TTC31Q49AM3 519 aaPredicted RBP4.32□□□□□ -1.72
COL8A1-205ENST00000463753 SLC27A3Q5K4L6 730 aa4.32□□□□□ -1.72
COL8A1-205ENST00000463753 FLAD1Q8NFF5 587 aa4.32□□□□□ -1.72
COL8A1-205ENST00000463753 RTF1Q92541 710 aaKnown RBP4.32□□□□□ -1.72
COL8A1-205ENST00000463753 ZNF446Q9NWS9 450 aa4.32□□□□□ -1.72
COL8A1-205ENST00000463753 RAI14Q9P0K7 980 aa4.32□□□□□ -1.72
COL8A1-205ENST00000463753 HPS5Q9UPZ3 1129 aa4.32□□□□□ -1.72
COL8A1-205ENST00000463753 DUOX1Q9NRD9 1551 aa4.31□□□□□ -1.72
COL8A1-205ENST00000463753 PRPF40AO75400 957 aaKnown RBP4.31□□□□□ -1.72
COL8A1-205ENST00000463753 BAG4O95429 457 aaKnown RBP4.31□□□□□ -1.72
COL8A1-205ENST00000463753 EZH2Q15910 746 aaKnown RBP4.31□□□□□ -1.72
COL8A1-205ENST00000463753 NOM1Q5C9Z4 860 aaKnown RBP4.31□□□□□ -1.72
COL8A1-205ENST00000463753 CCDC91Q7Z6B0 441 aa4.31□□□□□ -1.72
COL8A1-205ENST00000463753 HHIPL1Q96JK4 782 aa4.31□□□□□ -1.72
COL8A1-205ENST00000463753 LRRFIP2Q9Y608 721 aaKnown RBP4.31□□□□□ -1.72
COL8A1-205ENST00000463753 TRPM7Q96QT4 1865 aa4.31□□□□□ -1.72
COL8A1-205ENST00000463753 A0A1B0GUL7 405 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms