RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 MPHOSPH8Q99549 860 aa17.22■□□□□ 0.35
PHACTR4-203ENST00000463428 MINPP1Q9UNW1 487 aa17.22■□□□□ 0.35
PHACTR4-203ENST00000463428 GTF3C3Q9Y5Q9 886 aa17.22■□□□□ 0.35
PHACTR4-203ENST00000463428 KDM2BQ8NHM5 1336 aa17.22■□□□□ 0.35
PHACTR4-203ENST00000463428 PPEF1O14829 653 aaPredicted RBP17.21■□□□□ 0.35
PHACTR4-203ENST00000463428 IL15P40933 162 aaPredicted RBP17.21■□□□□ 0.35
PHACTR4-203ENST00000463428 G3BP1Q13283 466 aaKnown RBP eCLIP17.21■□□□□ 0.35
PHACTR4-203ENST00000463428 TMC4Q7Z404 712 aa17.21■□□□□ 0.35
PHACTR4-203ENST00000463428 SP8Q8IXZ3 490 aa17.21■□□□□ 0.35
PHACTR4-203ENST00000463428 CNNM1Q9NRU3 951 aa17.21■□□□□ 0.35
PHACTR4-203ENST00000463428 ATP6V0A2Q9Y487 856 aa17.21■□□□□ 0.35
PHACTR4-203ENST00000463428 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.21■□□□□ 0.35
PHACTR4-203ENST00000463428 B4GALNT3Q6L9W6 998 aa17.21■□□□□ 0.34
PHACTR4-203ENST00000463428 VGLL2Q8N8G2 317 aa17.21■□□□□ 0.34
PHACTR4-203ENST00000463428 GCC1Q96CN9 775 aa17.21■□□□□ 0.34
PHACTR4-203ENST00000463428 CCDC136Q96JN2 1154 aa17.21■□□□□ 0.34
PHACTR4-203ENST00000463428 RAB11FIP3O75154 756 aa17.2■□□□□ 0.34
PHACTR4-203ENST00000463428 CHRNDQ07001 517 aa17.2■□□□□ 0.34
PHACTR4-203ENST00000463428 HSP90AB4PQ58FF6 505 aa17.2■□□□□ 0.34
PHACTR4-203ENST00000463428 OLFM4Q6UX06 510 aa17.2■□□□□ 0.34
PHACTR4-203ENST00000463428 SNED1Q8TER0 1413 aa17.2■□□□□ 0.34
PHACTR4-203ENST00000463428 LTBP1Q14766 1721 aa17.19■□□□□ 0.34
PHACTR4-203ENST00000463428 DALRD3Q5D0E6 543 aaKnown RBP17.19■□□□□ 0.34
PHACTR4-203ENST00000463428 RHPN1Q8TCX5 695 aa17.19■□□□□ 0.34
PHACTR4-203ENST00000463428 MROH5Q6ZUA9 1318 aa17.19■□□□□ 0.34
PHACTR4-203ENST00000463428 ARFGEF1Q9Y6D6 1849 aa17.18■□□□□ 0.34
PHACTR4-203ENST00000463428 TFCP2Q12800 502 aa17.18■□□□□ 0.34
PHACTR4-203ENST00000463428 ERC1Q8IUD2 1116 aa17.18■□□□□ 0.34
PHACTR4-203ENST00000463428 HELBQ8NG08 1087 aaPredicted RBP17.18■□□□□ 0.34
PHACTR4-203ENST00000463428 C21orf2O43822 256 aa17.17■□□□□ 0.34
PHACTR4-203ENST00000463428 PDE8BO95263 885 aa17.17■□□□□ 0.34
PHACTR4-203ENST00000463428 GPSM2P81274 684 aa17.17■□□□□ 0.34
PHACTR4-203ENST00000463428 OS9Q13438 667 aaPredicted RBP17.17■□□□□ 0.34
PHACTR4-203ENST00000463428 METTL24Q5JXM2 366 aa17.17■□□□□ 0.34
PHACTR4-203ENST00000463428 KIF1BPQ96EK5 621 aa17.17■□□□□ 0.34
PHACTR4-203ENST00000463428 PODXL2Q9NZ53 605 aa17.17■□□□□ 0.34
PHACTR4-203ENST00000463428 CEP126Q9P2H0 1117 aa17.17■□□□□ 0.34
PHACTR4-203ENST00000463428 WTIPA6NIX2 430 aaPredicted RBP17.16■□□□□ 0.34
PHACTR4-203ENST00000463428 TAF5LO75529 589 aa17.16■□□□□ 0.34
PHACTR4-203ENST00000463428 CC2D2BQ6DHV5 1058 aa17.16■□□□□ 0.34
PHACTR4-203ENST00000463428 CENPQQ7L2Z9 268 aaPredicted RBP17.16■□□□□ 0.34
PHACTR4-203ENST00000463428 ANKRD2Q9GZV1 360 aa17.16■□□□□ 0.34
PHACTR4-203ENST00000463428 ZNF219Q9P2Y4 722 aaPredicted RBP17.16■□□□□ 0.34
PHACTR4-203ENST00000463428 WWC3Q9ULE0 1092 aa17.16■□□□□ 0.34
PHACTR4-203ENST00000463428 SNAP23O00161 211 aa17.15■□□□□ 0.34
PHACTR4-203ENST00000463428 APBB1O00213 710 aa17.15■□□□□ 0.34
PHACTR4-203ENST00000463428 SMARCA5O60264 1052 aaPredicted RBP17.15■□□□□ 0.34
PHACTR4-203ENST00000463428 FGFR2P21802 821 aa17.15■□□□□ 0.34
PHACTR4-203ENST00000463428 LRRCC1Q9C099 1032 aa17.15■□□□□ 0.34
PHACTR4-203ENST00000463428 GPR108Q9NPR9 543 aa17.15■□□□□ 0.34
PHACTR4-203ENST00000463428 BCS1LQ9Y276 419 aa17.15■□□□□ 0.34
PHACTR4-203ENST00000463428 FER1L6Q2WGJ9 1857 aa17.15■□□□□ 0.34
PHACTR4-203ENST00000463428 DUOX1Q9NRD9 1551 aa17.14■□□□□ 0.34
PHACTR4-203ENST00000463428 NUCB1Q02818 461 aa17.14■□□□□ 0.33
PHACTR4-203ENST00000463428 IL1RAPL2Q9NP60 686 aa17.14■□□□□ 0.33
PHACTR4-203ENST00000463428 XDHP47989 1333 aa17.14■□□□□ 0.33
PHACTR4-203ENST00000463428 ANKRD45Q5TZF3 282 aa17.13■□□□□ 0.33
PHACTR4-203ENST00000463428 MPNDQ8N594 471 aa17.13■□□□□ 0.33
PHACTR4-203ENST00000463428 EAF2Q96CJ1 260 aaPredicted RBP17.13■□□□□ 0.33
PHACTR4-203ENST00000463428 POLLQ9UGP5 575 aa17.13■□□□□ 0.33
PHACTR4-203ENST00000463428 NSFL1CQ9UNZ2 370 aaKnown RBP17.13■□□□□ 0.33
PHACTR4-203ENST00000463428 LEMD3Q9Y2U8 911 aa17.13■□□□□ 0.33
PHACTR4-203ENST00000463428 IRS2Q9Y4H2 1338 aa17.13■□□□□ 0.33
PHACTR4-203ENST00000463428 ATP2B4P23634 1241 aa17.13■□□□□ 0.33
PHACTR4-203ENST00000463428 UBE4AQ14139 1066 aa17.13■□□□□ 0.33
PHACTR4-203ENST00000463428 GRIPAP1Q4V328 841 aa17.13■□□□□ 0.33
PHACTR4-203ENST00000463428 CCDC93Q567U6 631 aa17.13■□□□□ 0.33
PHACTR4-203ENST00000463428 TNNI3KQ59H18 835 aa17.13■□□□□ 0.33
PHACTR4-203ENST00000463428 TBC1D16Q8TBP0 767 aa17.13■□□□□ 0.33
PHACTR4-203ENST00000463428 RTFDC1Q9BY42 306 aaPredicted RBP17.13■□□□□ 0.33
PHACTR4-203ENST00000463428 ANKIB1Q9P2G1 1089 aa17.13■□□□□ 0.33
PHACTR4-203ENST00000463428 FPGT-TNNI3KV9GXZ4 949 aa17.13■□□□□ 0.33
PHACTR4-203ENST00000463428 SRCAPQ6ZRS2 3230 aa17.12■□□□□ 0.33
PHACTR4-203ENST00000463428 TIMM10P62072 90 aa17.12■□□□□ 0.33
PHACTR4-203ENST00000463428 PUM3Q15397 648 aaKnown RBP17.12■□□□□ 0.33
PHACTR4-203ENST00000463428 SOGA3Q5TF21 947 aa17.12■□□□□ 0.33
PHACTR4-203ENST00000463428 TMX4Q9H1E5 349 aaPredicted RBP17.12■□□□□ 0.33
PHACTR4-203ENST00000463428 AKAP2Q9Y2D5 859 aa17.12■□□□□ 0.33
PHACTR4-203ENST00000463428 ZNF804BA4D1E1 1349 aa17.12■□□□□ 0.33
PHACTR4-203ENST00000463428 ZNF609O15014 1411 aa17.12■□□□□ 0.33
PHACTR4-203ENST00000463428 ARAP2Q8WZ64 1704 aa17.11■□□□□ 0.33
PHACTR4-203ENST00000463428 A0A1B0GUL7 405 aa17.11■□□□□ 0.33
PHACTR4-203ENST00000463428 YBX3P16989 372 aaKnown RBP eCLIP17.11■□□□□ 0.33
PHACTR4-203ENST00000463428 ATP2B3Q16720 1220 aa17.11■□□□□ 0.33
PHACTR4-203ENST00000463428 DPP8Q6V1X1 898 aaPredicted RBP17.11■□□□□ 0.33
PHACTR4-203ENST00000463428 C15orf52Q6ZUT6 534 aaKnown RBP17.11■□□□□ 0.33
PHACTR4-203ENST00000463428 CHD1LQ86WJ1 897 aa17.11■□□□□ 0.33
PHACTR4-203ENST00000463428 RTKN2Q8IZC4 609 aa17.11■□□□□ 0.33
PHACTR4-203ENST00000463428 CLASRPQ8N2M8 674 aaKnown RBP17.11■□□□□ 0.33
PHACTR4-203ENST00000463428 LPIN2Q92539 896 aa17.11■□□□□ 0.33
PHACTR4-203ENST00000463428 GGA1Q9UJY5 639 aa17.11■□□□□ 0.33
PHACTR4-203ENST00000463428 C16orf71Q8IYS4 520 aaPredicted RBP17.1■□□□□ 0.33
PHACTR4-203ENST00000463428 PSMD1Q99460 953 aa17.1■□□□□ 0.33
PHACTR4-203ENST00000463428 SALL3Q9BXA9 1300 aa17.09■□□□□ 0.33
PHACTR4-203ENST00000463428 NFKBIEO00221 500 aa17.09■□□□□ 0.33
PHACTR4-203ENST00000463428 UFL1O94874 794 aa17.09■□□□□ 0.33
PHACTR4-203ENST00000463428 KLRK1P26718 216 aa17.09■□□□□ 0.33
PHACTR4-203ENST00000463428 TXNRD3Q86VQ6 643 aa17.09■□□□□ 0.33
PHACTR4-203ENST00000463428 GPR101Q96P66 508 aaPredicted RBP17.09■□□□□ 0.33
PHACTR4-203ENST00000463428 LNPKQ9C0E8 428 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms