RNA–Protein interactions for RNA: ENST00000462473.1

SLC6A1-204, Transcript of solute carrier family 6 member 1, humanhuman

TSL 3

Gene SLC6A1, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-204ENST00000462473 XDHP47989 1333 aa23.9■■□□□ 1.42
SLC6A1-204ENST00000462473 POTEIP0CG38 1075 aa23.9■■□□□ 1.42
SLC6A1-204ENST00000462473 POTEJP0CG39 1038 aa23.9■■□□□ 1.42
SLC6A1-204ENST00000462473 HNRNPUQ00839 825 aaKnown RBP eCLIP23.9■■□□□ 1.42
SLC6A1-204ENST00000462473 CIAPIN1Q6FI81 312 aa23.9■■□□□ 1.42
SLC6A1-204ENST00000462473 CHADLQ6NUI6 762 aa23.9■■□□□ 1.42
SLC6A1-204ENST00000462473 GPR101Q96P66 508 aaPredicted RBP23.9■■□□□ 1.42
SLC6A1-204ENST00000462473 DBNDD1Q9H9R9 158 aa23.9■■□□□ 1.42
SLC6A1-204ENST00000462473 CHMP3Q9Y3E7 222 aa23.9■■□□□ 1.42
SLC6A1-204ENST00000462473 SCN4AP35499 1836 aa23.89■■□□□ 1.42
SLC6A1-204ENST00000462473 RAD17O75943 681 aa23.89■■□□□ 1.41
SLC6A1-204ENST00000462473 FOXO4P98177 505 aa23.89■■□□□ 1.41
SLC6A1-204ENST00000462473 TNIP1Q15025 636 aa23.89■■□□□ 1.41
SLC6A1-204ENST00000462473 PNMA8AQ86V59 439 aaPredicted RBP23.89■■□□□ 1.41
SLC6A1-204ENST00000462473 MINPP1Q9UNW1 487 aa23.89■■□□□ 1.41
SLC6A1-204ENST00000462473 MYH3P11055 1940 aa23.88■■□□□ 1.41
SLC6A1-204ENST00000462473 ANKRD18BA2A2Z9 1011 aa23.88■■□□□ 1.41
SLC6A1-204ENST00000462473 G3V3G9 751 aa23.88■■□□□ 1.41
SLC6A1-204ENST00000462473 ATP2B4P23634 1241 aa23.88■■□□□ 1.41
SLC6A1-204ENST00000462473 DOK7Q18PE1 504 aa23.88■■□□□ 1.41
SLC6A1-204ENST00000462473 DCAF8Q5TAQ9 597 aa23.88■■□□□ 1.41
SLC6A1-204ENST00000462473 LDHDQ86WU2 507 aa23.88■■□□□ 1.41
SLC6A1-204ENST00000462473 MPHOSPH8Q99549 860 aa23.88■■□□□ 1.41
SLC6A1-204ENST00000462473 CLEC11AQ9Y240 323 aa23.88■■□□□ 1.41
SLC6A1-204ENST00000462473 YDJCA8MPS7 323 aa23.87■■□□□ 1.41
SLC6A1-204ENST00000462473 SCNN1DP51172 638 aa23.87■■□□□ 1.41
SLC6A1-204ENST00000462473 ECE2O60344 883 aa23.86■■□□□ 1.41
SLC6A1-204ENST00000462473 EPS15P42566 896 aa23.86■■□□□ 1.41
SLC6A1-204ENST00000462473 IFIT5Q13325 482 aaKnown RBP23.86■■□□□ 1.41
SLC6A1-204ENST00000462473 LMBR1LQ6UX01 489 aa23.86■■□□□ 1.41
SLC6A1-204ENST00000462473 EPHA10Q5JZY3 1008 aa23.85■■□□□ 1.41
SLC6A1-204ENST00000462473 NBPF7P0C2Y1 421 aaPredicted RBP23.84■■□□□ 1.41
SLC6A1-204ENST00000462473 GMPSP49915 693 aaPredicted RBP23.84■■□□□ 1.41
SLC6A1-204ENST00000462473 GPRC5DQ9NZD1 345 aa23.84■■□□□ 1.41
SLC6A1-204ENST00000462473 NOB1Q9ULX3 412 aaKnown RBP23.84■■□□□ 1.41
SLC6A1-204ENST00000462473 LTBP1Q14766 1721 aa23.84■■□□□ 1.41
SLC6A1-204ENST00000462473 CCT4P50991 539 aaKnown RBP23.83■■□□□ 1.41
SLC6A1-204ENST00000462473 CCDC57Q2TAC2 916 aa23.83■■□□□ 1.41
SLC6A1-204ENST00000462473 SUCLG2Q96I99 432 aa23.83■■□□□ 1.41
SLC6A1-204ENST00000462473 ANKRD2Q9GZV1 360 aa23.83■■□□□ 1.41
SLC6A1-204ENST00000462473 PSMD14O00487 310 aa23.82■■□□□ 1.4
SLC6A1-204ENST00000462473 RARSP54136 660 aaKnown RBP23.82■■□□□ 1.4
SLC6A1-204ENST00000462473 BRPF1P55201 1214 aaPredicted RBP23.82■■□□□ 1.4
SLC6A1-204ENST00000462473 UTYO14607 1347 aa23.82■■□□□ 1.4
SLC6A1-204ENST00000462473 HTRA3P83110 453 aa23.81■■□□□ 1.4
SLC6A1-204ENST00000462473 TAF7LQ5H9L4 462 aa23.81■■□□□ 1.4
SLC6A1-204ENST00000462473 USP50Q70EL3 339 aaPredicted RBP23.81■■□□□ 1.4
SLC6A1-204ENST00000462473 KCNQ5Q9NR82 932 aa23.81■■□□□ 1.4
SLC6A1-204ENST00000462473 LEMD3Q9Y2U8 911 aa23.81■■□□□ 1.4
SLC6A1-204ENST00000462473 WTIPA6NIX2 430 aaPredicted RBP23.8■■□□□ 1.4
SLC6A1-204ENST00000462473 CHRNDQ07001 517 aa23.8■■□□□ 1.4
SLC6A1-204ENST00000462473 API5Q9BZZ5 524 aaKnown RBP23.8■■□□□ 1.4
SLC6A1-204ENST00000462473 ADARB2Q9NS39 739 aaKnown RBP23.8■■□□□ 1.4
SLC6A1-204ENST00000462473 KAZALD1Q96I82 304 aa23.79■■□□□ 1.4
SLC6A1-204ENST00000462473 CNOT7Q9UIV1 285 aaKnown RBP23.79■■□□□ 1.4
SLC6A1-204ENST00000462473 ZBTB12Q9Y330 459 aaPredicted RBP23.79■■□□□ 1.4
SLC6A1-204ENST00000462473 SPEF2Q9C093 1822 aa23.78■■□□□ 1.4
SLC6A1-204ENST00000462473 H7C1D1 291 aa23.78■■□□□ 1.4
SLC6A1-204ENST00000462473 KCNJ4P48050 445 aa23.78■■□□□ 1.4
SLC6A1-204ENST00000462473 MAP1SQ66K74 1059 aaPredicted RBP23.78■■□□□ 1.4
SLC6A1-204ENST00000462473 ZNF594Q96JF6 807 aaPredicted RBP23.78■■□□□ 1.4
SLC6A1-204ENST00000462473 USP44Q9H0E7 712 aa23.78■■□□□ 1.4
SLC6A1-204ENST00000462473 ZNF804BA4D1E1 1349 aa23.78■■□□□ 1.4
SLC6A1-204ENST00000462473 MED23Q9ULK4 1368 aa23.78■■□□□ 1.4
SLC6A1-204ENST00000462473 LDHAL6AQ6ZMR3 332 aa23.77■■□□□ 1.4
SLC6A1-204ENST00000462473 PODNQ7Z5L7 613 aa23.77■■□□□ 1.4
SLC6A1-204ENST00000462473 CNTROBQ8N137 903 aa23.77■■□□□ 1.4
SLC6A1-204ENST00000462473 DPF2Q92785 391 aa23.77■■□□□ 1.4
SLC6A1-204ENST00000462473 BICC1Q9H694 974 aaKnown RBP23.77■■□□□ 1.4
SLC6A1-204ENST00000462473 CNNM1Q9NRU3 951 aa23.77■■□□□ 1.4
SLC6A1-204ENST00000462473 KIF16BQ96L93 1317 aa23.77■■□□□ 1.4
SLC6A1-204ENST00000462473 RPS12P25398 132 aaKnown RBP23.76■■□□□ 1.39
SLC6A1-204ENST00000462473 MICALL2Q8IY33 904 aa23.76■■□□□ 1.39
SLC6A1-204ENST00000462473 TAF5LO75529 589 aa23.75■■□□□ 1.39
SLC6A1-204ENST00000462473 ITGBL1O95965 494 aaPredicted RBP23.75■■□□□ 1.39
SLC6A1-204ENST00000462473 VIL1P09327 827 aaKnown RBP23.75■■□□□ 1.39
SLC6A1-204ENST00000462473 HELBQ8NG08 1087 aaPredicted RBP23.75■■□□□ 1.39
SLC6A1-204ENST00000462473 RABL6Q3YEC7 729 aaPredicted RBP23.74■■□□□ 1.39
SLC6A1-204ENST00000462473 DNAJC5GQ8N7S2 189 aa23.74■■□□□ 1.39
SLC6A1-204ENST00000462473 ARHGAP45Q92619 1136 aa23.74■■□□□ 1.39
SLC6A1-204ENST00000462473 PASKQ96RG2 1323 aa23.74■■□□□ 1.39
SLC6A1-204ENST00000462473 ADAMTSL1Q8N6G6 1762 aa23.73■■□□□ 1.39
SLC6A1-204ENST00000462473 SHTN1A0MZ66 631 aa23.73■■□□□ 1.39
SLC6A1-204ENST00000462473 TXNRD3Q86VQ6 643 aa23.73■■□□□ 1.39
SLC6A1-204ENST00000462473 ANKRD44Q8N8A2 993 aa23.73■■□□□ 1.39
SLC6A1-204ENST00000462473 COA1Q9GZY4 146 aa23.73■■□□□ 1.39
SLC6A1-204ENST00000462473 ZBED9Q6R2W3 1325 aa23.73■■□□□ 1.39
SLC6A1-204ENST00000462473 USP17L3A6NCW0 530 aa23.72■■□□□ 1.39
SLC6A1-204ENST00000462473 USP17L4A6NCW7 530 aa23.72■■□□□ 1.39
SLC6A1-204ENST00000462473 IPO8O15397 1037 aaKnown RBP23.72■■□□□ 1.39
SLC6A1-204ENST00000462473 PLIN1O60240 522 aa23.72■■□□□ 1.39
SLC6A1-204ENST00000462473 BCAR3O75815 825 aa23.72■■□□□ 1.39
SLC6A1-204ENST00000462473 USP17L1Q7RTZ2 530 aa23.72■■□□□ 1.39
SLC6A1-204ENST00000462473 KLRK1P26718 216 aa23.71■■□□□ 1.39
SLC6A1-204ENST00000462473 RSBN1LQ6PCB5 846 aaPredicted RBP23.71■■□□□ 1.39
SLC6A1-204ENST00000462473 AGBL3Q8NEM8 1001 aa23.71■■□□□ 1.39
SLC6A1-204ENST00000462473 TRPM4Q8TD43 1214 aa23.71■■□□□ 1.39
SLC6A1-204ENST00000462473 FRAT1Q92837 279 aaPredicted RBP23.71■■□□□ 1.39
SLC6A1-204ENST00000462473 KLRG1Q96E93 195 aa23.71■■□□□ 1.39
SLC6A1-204ENST00000462473 CREBZFQ9NS37 354 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms