RNA–Protein interactions for RNA: ENST00000461603.5

LMBR1-215, Transcript of limb development membrane protein 1, humanhuman

TSL 4

Gene LMBR1, Length 612 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-215ENST00000461603 HIRAP54198 1017 aaPredicted RBP8.42□□□□□ -1.06
LMBR1-215ENST00000461603 USP17L24Q0WX57 530 aa8.42□□□□□ -1.06
LMBR1-215ENST00000461603 NBPF1Q3BBV0 1214 aa8.42□□□□□ -1.06
LMBR1-215ENST00000461603 ANKMY2Q8IV38 441 aa8.42□□□□□ -1.06
LMBR1-215ENST00000461603 CRISPLD1Q9H336 500 aa8.42□□□□□ -1.06
LMBR1-215ENST00000461603 SERTAD1Q9UHV2 236 aa8.42□□□□□ -1.06
LMBR1-215ENST00000461603 LAMC1P11047 1609 aa8.41□□□□□ -1.06
LMBR1-215ENST00000461603 VPS8Q8N3P4 1428 aa8.41□□□□□ -1.06
LMBR1-215ENST00000461603 METP08581 1390 aa8.41□□□□□ -1.06
LMBR1-215ENST00000461603 ERBB4Q15303 1308 aa8.41□□□□□ -1.06
LMBR1-215ENST00000461603 STAU1O95793 577 aaKnown RBP8.41□□□□□ -1.06
LMBR1-215ENST00000461603 SRPK2P78362 688 aaKnown RBP8.41□□□□□ -1.06
LMBR1-215ENST00000461603 INSM1Q01101 510 aaPredicted RBP8.41□□□□□ -1.06
LMBR1-215ENST00000461603 SF3B2Q13435 895 aaKnown RBP8.41□□□□□ -1.06
LMBR1-215ENST00000461603 ORAI2Q96SN7 254 aa8.41□□□□□ -1.06
LMBR1-215ENST00000461603 CHMP3Q9Y3E7 222 aa8.41□□□□□ -1.06
LMBR1-215ENST00000461603 BRWD3Q6RI45 1802 aa8.4□□□□□ -1.06
LMBR1-215ENST00000461603 COL22A1Q8NFW1 1626 aaPredicted RBP8.4□□□□□ -1.06
LMBR1-215ENST00000461603 MYOM2P54296 1465 aa8.4□□□□□ -1.06
LMBR1-215ENST00000461603 CSB-PGBD3P0DP91 1061 aa8.4□□□□□ -1.06
LMBR1-215ENST00000461603 VEGFBP49765 207 aa8.4□□□□□ -1.06
LMBR1-215ENST00000461603 PSMA6P60900 246 aaKnown RBP8.4□□□□□ -1.06
LMBR1-215ENST00000461603 CRTC2Q53ET0 693 aaPredicted RBP8.4□□□□□ -1.06
LMBR1-215ENST00000461603 PGBD3Q8N328 593 aa8.4□□□□□ -1.06
LMBR1-215ENST00000461603 PBXIP1Q96AQ6 731 aa8.4□□□□□ -1.06
LMBR1-215ENST00000461603 ZNF594Q96JF6 807 aaPredicted RBP8.4□□□□□ -1.06
LMBR1-215ENST00000461603 MARF1Q9Y4F3 1742 aaKnown RBP8.4□□□□□ -1.07
LMBR1-215ENST00000461603 E9PCH4 1651 aa8.4□□□□□ -1.07
LMBR1-215ENST00000461603 GLI3P10071 1580 aa8.39□□□□□ -1.07
LMBR1-215ENST00000461603 RALGAPBQ86X10 1494 aa8.39□□□□□ -1.07
LMBR1-215ENST00000461603 ANKRD50Q9ULJ7 1429 aa8.39□□□□□ -1.07
LMBR1-215ENST00000461603 ATG7O95352 703 aa8.39□□□□□ -1.07
LMBR1-215ENST00000461603 TATP17735 454 aaPredicted RBP8.39□□□□□ -1.07
LMBR1-215ENST00000461603 EFHC2Q5JST6 749 aa8.39□□□□□ -1.07
LMBR1-215ENST00000461603 NLRP8Q86W28 1048 aa8.39□□□□□ -1.07
LMBR1-215ENST00000461603 ZNF837Q96EG3 531 aaPredicted RBP8.39□□□□□ -1.07
LMBR1-215ENST00000461603 RFX1P22670 979 aa8.38□□□□□ -1.07
LMBR1-215ENST00000461603 DPYDQ12882 1025 aa8.38□□□□□ -1.07
LMBR1-215ENST00000461603 SWI5Q1ZZU3 235 aa8.38□□□□□ -1.07
LMBR1-215ENST00000461603 LCE2CQ5TA81 110 aa8.38□□□□□ -1.07
LMBR1-215ENST00000461603 C1orf53Q5VUE5 145 aa8.38□□□□□ -1.07
LMBR1-215ENST00000461603 FIGNL1Q6PIW4 674 aa8.38□□□□□ -1.07
LMBR1-215ENST00000461603 SLC9A9Q8IVB4 645 aa8.38□□□□□ -1.07
LMBR1-215ENST00000461603 VWA5B2Q8N398 1253 aa8.38□□□□□ -1.07
LMBR1-215ENST00000461603 FAM200AQ8TCP9 573 aa8.38□□□□□ -1.07
LMBR1-215ENST00000461603 TRERF1Q96PN7 1200 aa8.38□□□□□ -1.07
LMBR1-215ENST00000461603 ARXQ96QS3 562 aa8.38□□□□□ -1.07
LMBR1-215ENST00000461603 GAS2L1Q99501 681 aaPredicted RBP8.38□□□□□ -1.07
LMBR1-215ENST00000461603 CFHR5Q9BXR6 569 aa8.38□□□□□ -1.07
LMBR1-215ENST00000461603 NUCKS1Q9H1E3 243 aaKnown RBP8.38□□□□□ -1.07
LMBR1-215ENST00000461603 CABP1Q9NZU7 370 aa8.38□□□□□ -1.07
LMBR1-215ENST00000461603 ADGRL2O95490 1459 aa8.38□□□□□ -1.07
LMBR1-215ENST00000461603 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.37□□□□□ -1.07
LMBR1-215ENST00000461603 YY1P25490 414 aa8.37□□□□□ -1.07
LMBR1-215ENST00000461603 MSX1P28360 303 aa8.37□□□□□ -1.07
LMBR1-215ENST00000461603 NOS2P35228 1153 aa8.37□□□□□ -1.07
LMBR1-215ENST00000461603 GMPRP36959 345 aa8.37□□□□□ -1.07
LMBR1-215ENST00000461603 PLA2G4AP47712 749 aa8.37□□□□□ -1.07
LMBR1-215ENST00000461603 XPCQ01831 940 aaPredicted RBP8.37□□□□□ -1.07
LMBR1-215ENST00000461603 DBN1Q16643 649 aa8.37□□□□□ -1.07
LMBR1-215ENST00000461603 RIPOR1Q6ZS17 1223 aa8.37□□□□□ -1.07
LMBR1-215ENST00000461603 TNS4Q8IZW8 715 aa8.37□□□□□ -1.07
LMBR1-215ENST00000461603 PHF24Q9UPV7 400 aa8.37□□□□□ -1.07
LMBR1-215ENST00000461603 SPHKAPQ2M3C7 1700 aa8.37□□□□□ -1.07
LMBR1-215ENST00000461603 SERTM1A2A2V5 107 aa8.36□□□□□ -1.07
LMBR1-215ENST00000461603 CDC14CA4D256 554 aa8.36□□□□□ -1.07
LMBR1-215ENST00000461603 SFI1A8K8P3 1242 aa8.36□□□□□ -1.07
LMBR1-215ENST00000461603 IGFBP4P22692 258 aa8.36□□□□□ -1.07
LMBR1-215ENST00000461603 PHKA2P46019 1235 aa8.36□□□□□ -1.07
LMBR1-215ENST00000461603 ZNF326Q5BKZ1 582 aaKnown RBP8.36□□□□□ -1.07
LMBR1-215ENST00000461603 UNC5CLQ8IV45 518 aa8.36□□□□□ -1.07
LMBR1-215ENST00000461603 L3MBTL2Q969R5 705 aa8.36□□□□□ -1.07
LMBR1-215ENST00000461603 IQGAP3Q86VI3 1631 aa8.36□□□□□ -1.07
LMBR1-215ENST00000461603 ACIN1Q9UKV3 1341 aaKnown RBP8.35□□□□□ -1.07
LMBR1-215ENST00000461603 ATP4AP20648 1035 aa8.35□□□□□ -1.07
LMBR1-215ENST00000461603 BAG6P46379 1132 aa8.35□□□□□ -1.07
LMBR1-215ENST00000461603 HIF1AQ16665 826 aa8.35□□□□□ -1.07
LMBR1-215ENST00000461603 TSEN2Q8NCE0 465 aaKnown RBP8.35□□□□□ -1.07
LMBR1-215ENST00000461603 CUEDC1Q9NWM3 386 aaPredicted RBP8.35□□□□□ -1.07
LMBR1-215ENST00000461603 SLIT2O94813 1529 aa8.34□□□□□ -1.07
LMBR1-215ENST00000461603 NPHP3Q7Z494 1330 aa8.34□□□□□ -1.07
LMBR1-215ENST00000461603 PXDNQ92626 1479 aa8.34□□□□□ -1.07
LMBR1-215ENST00000461603 EML1O00423 815 aa8.34□□□□□ -1.07
LMBR1-215ENST00000461603 R3HDM1Q15032 1099 aaKnown RBP8.34□□□□□ -1.07
LMBR1-215ENST00000461603 SAMD5Q5TGI4 173 aa8.34□□□□□ -1.07
LMBR1-215ENST00000461603 KRT27Q7Z3Y8 459 aa8.34□□□□□ -1.07
LMBR1-215ENST00000461603 TSPAN10Q9H1Z9 355 aaPredicted RBP8.34□□□□□ -1.07
LMBR1-215ENST00000461603 NOVA2Q9UNW9 492 aaKnown RBP8.34□□□□□ -1.07
LMBR1-215ENST00000461603 NSFL1CQ9UNZ2 370 aaKnown RBP8.34□□□□□ -1.07
LMBR1-215ENST00000461603 ROBO2Q9HCK4 1378 aa8.34□□□□□ -1.07
LMBR1-215ENST00000461603 FOXO3O43524 673 aa8.33□□□□□ -1.08
LMBR1-215ENST00000461603 SRSF11Q05519 484 aaKnown RBP8.33□□□□□ -1.08
LMBR1-215ENST00000461603 FAM50AQ14320 339 aaKnown RBP8.33□□□□□ -1.08
LMBR1-215ENST00000461603 GPR161Q8N6U8 529 aaKnown RBP8.33□□□□□ -1.08
LMBR1-215ENST00000461603 ZDHHC1Q8WTX9 485 aa8.33□□□□□ -1.08
LMBR1-215ENST00000461603 AIDAQ96BJ3 306 aa8.33□□□□□ -1.08
LMBR1-215ENST00000461603 COL25A1Q9BXS0 654 aaPredicted RBP8.33□□□□□ -1.08
LMBR1-215ENST00000461603 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.33□□□□□ -1.084e-6■■■■■ 106.2
LMBR1-215ENST00000461603 ATXN7L1Q9ULK2 861 aaPredicted RBP8.33□□□□□ -1.08
LMBR1-215ENST00000461603 CCDC9Q9Y3X0 531 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms