RNA–Protein interactions for RNA: ENST00000461099.1

HMG20B-207, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 687 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-207ENST00000461099 NOGQ13253 232 aa28.44■■■□□ 2.14
HMG20B-207ENST00000461099 RTL9Q8NET4 1388 aa28.44■■■□□ 2.14
HMG20B-207ENST00000461099 HSP90B1P14625 803 aaKnown RBP28.43■■■□□ 2.14
HMG20B-207ENST00000461099 GOLGA2Q08379 1002 aa28.43■■■□□ 2.14
HMG20B-207ENST00000461099 RBM26Q5T8P6 1007 aaKnown RBP28.43■■■□□ 2.14
HMG20B-207ENST00000461099 ZC3H12CQ9C0D7 883 aaKnown RBP28.43■■■□□ 2.14
HMG20B-207ENST00000461099 PODXL2Q9NZ53 605 aa28.43■■■□□ 2.14
HMG20B-207ENST00000461099 DCPSQ96C86 337 aaKnown RBP28.42■■■□□ 2.14
HMG20B-207ENST00000461099 PHAXQ9H814 394 aaKnown RBP28.42■■■□□ 2.14
HMG20B-207ENST00000461099 POLR2AP24928 1970 aaKnown RBP28.42■■■□□ 2.14
HMG20B-207ENST00000461099 VIL1P09327 827 aaKnown RBP28.41■■■□□ 2.14
HMG20B-207ENST00000461099 FAM161AQ3B820 660 aa28.41■■■□□ 2.14
HMG20B-207ENST00000461099 ZIC5Q96T25 663 aa28.41■■■□□ 2.14
HMG20B-207ENST00000461099 SEC31BQ9NQW1 1179 aa28.41■■■□□ 2.14
HMG20B-207ENST00000461099 C2orf69Q8N8R5 385 aa28.4■■■□□ 2.14
HMG20B-207ENST00000461099 CASP8AP2Q9UKL3 1982 aa28.4■■■□□ 2.14
HMG20B-207ENST00000461099 CCDC191Q8NCU4 936 aa28.39■■■□□ 2.14
HMG20B-207ENST00000461099 MYD88Q99836 296 aa28.39■■■□□ 2.14
HMG20B-207ENST00000461099 GBA2Q9HCG7 927 aaPredicted RBP28.39■■■□□ 2.14
HMG20B-207ENST00000461099 IFT57Q9NWB7 429 aa28.39■■■□□ 2.14
HMG20B-207ENST00000461099 ANKIB1Q9P2G1 1089 aa28.39■■■□□ 2.14
HMG20B-207ENST00000461099 ADM5C9JUS6 153 aa28.38■■■□□ 2.13
HMG20B-207ENST00000461099 G3V3G9 751 aa28.38■■■□□ 2.13
HMG20B-207ENST00000461099 ELL2O00472 640 aaPredicted RBP28.38■■■□□ 2.13
HMG20B-207ENST00000461099 UFL1O94874 794 aa28.38■■■□□ 2.13
HMG20B-207ENST00000461099 KIF4BQ2VIQ3 1234 aa28.38■■■□□ 2.13
HMG20B-207ENST00000461099 CCDC152Q4G0S7 254 aa28.38■■■□□ 2.13
HMG20B-207ENST00000461099 DCAF8Q5TAQ9 597 aa28.38■■■□□ 2.13
HMG20B-207ENST00000461099 RGMBQ6NW40 437 aa28.38■■■□□ 2.13
HMG20B-207ENST00000461099 MCOLN1Q9GZU1 580 aa28.38■■■□□ 2.13
HMG20B-207ENST00000461099 GGA1Q9UJY5 639 aa28.38■■■□□ 2.13
HMG20B-207ENST00000461099 PCCAP05165 728 aaPredicted RBP28.37■■■□□ 2.13
HMG20B-207ENST00000461099 RGS19P49795 217 aa28.37■■■□□ 2.13
HMG20B-207ENST00000461099 GNAI1P63096 354 aa28.37■■■□□ 2.13
HMG20B-207ENST00000461099 CALD1Q05682 793 aaKnown RBP28.37■■■□□ 2.13
HMG20B-207ENST00000461099 SCN9AQ15858 1988 aa28.37■■■□□ 2.13
HMG20B-207ENST00000461099 FAM155AB1AL88 458 aaPredicted RBP28.36■■■□□ 2.13
HMG20B-207ENST00000461099 APAF1O14727 1248 aa28.36■■■□□ 2.13
HMG20B-207ENST00000461099 PDE8AO60658 829 aa28.36■■■□□ 2.13
HMG20B-207ENST00000461099 CCDC102AQ96A19 550 aa28.36■■■□□ 2.13
HMG20B-207ENST00000461099 CWC25Q9NXE8 425 aaPredicted RBP28.35■■■□□ 2.13
HMG20B-207ENST00000461099 MLLT1Q03111 559 aaPredicted RBP28.34■■■□□ 2.13
HMG20B-207ENST00000461099 SULF1Q8IWU6 871 aa28.34■■■□□ 2.13
HMG20B-207ENST00000461099 JARID2Q92833 1246 aaPredicted RBP28.34■■■□□ 2.13
HMG20B-207ENST00000461099 GGA3Q9NZ52 723 aa28.34■■■□□ 2.13
HMG20B-207ENST00000461099 ZNF157P51786 506 aaPredicted RBP28.33■■■□□ 2.13
HMG20B-207ENST00000461099 C8orf58Q8NAV2 365 aa28.33■■■□□ 2.13
HMG20B-207ENST00000461099 PRKRIP1Q9H875 184 aaPredicted RBP28.33■■■□□ 2.13
HMG20B-207ENST00000461099 ZNF280AP59817 542 aaPredicted RBP28.32■■■□□ 2.12
HMG20B-207ENST00000461099 DGKZQ13574 1117 aa28.32■■■□□ 2.12
HMG20B-207ENST00000461099 RSBN1LQ6PCB5 846 aaPredicted RBP28.32■■■□□ 2.12
HMG20B-207ENST00000461099 AGBL3Q8NEM8 1001 aa28.32■■■□□ 2.12
HMG20B-207ENST00000461099 CCDC85AQ96PX6 553 aaPredicted RBP28.32■■■□□ 2.12
HMG20B-207ENST00000461099 METTL22Q9BUU2 404 aaPredicted RBP28.32■■■□□ 2.12
HMG20B-207ENST00000461099 DDX58O95786 925 aaKnown RBP28.31■■■□□ 2.12
HMG20B-207ENST00000461099 KIF23Q02241 960 aaPredicted RBP28.31■■■□□ 2.12
HMG20B-207ENST00000461099 ANKRD18AQ8IVF6 992 aa28.31■■■□□ 2.12
HMG20B-207ENST00000461099 CHMP4AQ9BY43 222 aa28.31■■■□□ 2.12
HMG20B-207ENST00000461099 ASTN2O75129 1339 aaPredicted RBP28.31■■■□□ 2.12
HMG20B-207ENST00000461099 ZNF609O15014 1411 aa28.3■■■□□ 2.12
HMG20B-207ENST00000461099 XDHP47989 1333 aa28.3■■■□□ 2.12
HMG20B-207ENST00000461099 CCDC30Q5VVM6 783 aa28.3■■■□□ 2.12
HMG20B-207ENST00000461099 SAGE1Q9NXZ1 904 aa28.3■■■□□ 2.12
HMG20B-207ENST00000461099 SCARF1Q14162 830 aa28.29■■■□□ 2.12
HMG20B-207ENST00000461099 CDCA5Q96FF9 252 aa28.28■■■□□ 2.12
HMG20B-207ENST00000461099 GMLQ99445 158 aa28.28■■■□□ 2.12
HMG20B-207ENST00000461099 ATP2B4P23634 1241 aa28.27■■■□□ 2.12
HMG20B-207ENST00000461099 ANGEL2Q5VTE6 544 aaKnown RBP28.27■■■□□ 2.12
HMG20B-207ENST00000461099 MAP3K2Q9Y2U5 619 aa28.27■■■□□ 2.12
HMG20B-207ENST00000461099 SLC10A3P09131 477 aa28.26■■■□□ 2.11
HMG20B-207ENST00000461099 USP17L8P0C7I0 530 aa28.26■■■□□ 2.11
HMG20B-207ENST00000461099 PODNQ7Z5L7 613 aa28.26■■■□□ 2.11
HMG20B-207ENST00000461099 USP17L3A6NCW0 530 aa28.25■■■□□ 2.11
HMG20B-207ENST00000461099 USP17L4A6NCW7 530 aa28.25■■■□□ 2.11
HMG20B-207ENST00000461099 CTSWP56202 376 aa28.25■■■□□ 2.11
HMG20B-207ENST00000461099 USP17L1Q7RTZ2 530 aa28.25■■■□□ 2.11
HMG20B-207ENST00000461099 CDC5LQ99459 802 aaKnown RBP28.25■■■□□ 2.11
HMG20B-207ENST00000461099 MYOZ2Q9NPC6 264 aa28.25■■■□□ 2.11
HMG20B-207ENST00000461099 RNF186Q9NXI6 227 aa28.25■■■□□ 2.11
HMG20B-207ENST00000461099 PSME4Q14997 1843 aa28.25■■■□□ 2.11
HMG20B-207ENST00000461099 TRPA1O75762 1119 aa28.24■■■□□ 2.11
HMG20B-207ENST00000461099 KSR2Q6VAB6 950 aa28.24■■■□□ 2.11
HMG20B-207ENST00000461099 TSPYL6Q8N831 410 aa28.24■■■□□ 2.11
HMG20B-207ENST00000461099 CSRNP1Q96S65 589 aa28.24■■■□□ 2.11
HMG20B-207ENST00000461099 PI4KAP2A4QPH2 592 aa28.23■■■□□ 2.11
HMG20B-207ENST00000461099 IGKV5-2P06315 115 aa28.23■■■□□ 2.11
HMG20B-207ENST00000461099 PI4KAP1Q8N8J0 262 aa28.23■■■□□ 2.11
HMG20B-207ENST00000461099 PITPNM2Q9BZ72 1349 aa28.22■■■□□ 2.11
HMG20B-207ENST00000461099 WTIPA6NIX2 430 aaPredicted RBP28.22■■■□□ 2.11
HMG20B-207ENST00000461099 TTLL11Q8NHH1 800 aa28.22■■■□□ 2.11
HMG20B-207ENST00000461099 BSDC1Q9NW68 430 aaPredicted RBP28.22■■■□□ 2.11
HMG20B-207ENST00000461099 FKBP1BP68106 108 aa28.21■■■□□ 2.11
HMG20B-207ENST00000461099 MINPP1Q9UNW1 487 aa28.21■■■□□ 2.11
HMG20B-207ENST00000461099 AKAP11Q9UKA4 1901 aa28.21■■■□□ 2.11
HMG20B-207ENST00000461099 REM2Q8IYK8 340 aaPredicted RBP28.2■■■□□ 2.1
HMG20B-207ENST00000461099 GREM2Q9H772 168 aa28.2■■■□□ 2.1
HMG20B-207ENST00000461099 NEXNQ0ZGT2 675 aa28.19■■■□□ 2.1
HMG20B-207ENST00000461099 RASAL3Q86YV0 1011 aa28.19■■■□□ 2.1
HMG20B-207ENST00000461099 MED23Q9ULK4 1368 aa28.19■■■□□ 2.1
HMG20B-207ENST00000461099 STK31Q9BXU1 1019 aa28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms