RNA–Protein interactions for RNA: ENST00000461063.6

SOX2-OT-202, SOX2 overlapping transcript, humanhuman

TSL 3 BASIC

Gene SOX2-OT, Length 566 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-202ENST00000461063 CCDC191Q8NCU4 936 aa11.35□□□□□ -0.59
SOX2-OT-202ENST00000461063 WBP1LQ9NX94 342 aa11.35□□□□□ -0.59
SOX2-OT-202ENST00000461063 POLLQ9UGP5 575 aa11.35□□□□□ -0.59
SOX2-OT-202ENST00000461063 PGAP2Q9UHJ9 254 aa11.35□□□□□ -0.59
SOX2-OT-202ENST00000461063 WDR33Q9C0J8 1336 aaKnown RBP11.35□□□□□ -0.59
SOX2-OT-202ENST00000461063 SHTN1A0MZ66 631 aa11.34□□□□□ -0.59
SOX2-OT-202ENST00000461063 C6orf229H3BNL8 230 aa11.34□□□□□ -0.59
SOX2-OT-202ENST00000461063 RIMBP2O15034 1052 aa11.34□□□□□ -0.59
SOX2-OT-202ENST00000461063 PCCAP05165 728 aaPredicted RBP11.34□□□□□ -0.59
SOX2-OT-202ENST00000461063 HSP90B1P14625 803 aaKnown RBP11.34□□□□□ -0.59
SOX2-OT-202ENST00000461063 TRPM4Q8TD43 1214 aa11.34□□□□□ -0.59
SOX2-OT-202ENST00000461063 JARID2Q92833 1246 aaPredicted RBP11.34□□□□□ -0.59
SOX2-OT-202ENST00000461063 AIDAQ96BJ3 306 aa11.34□□□□□ -0.59
SOX2-OT-202ENST00000461063 METTL22Q9BUU2 404 aaPredicted RBP11.34□□□□□ -0.59
SOX2-OT-202ENST00000461063 CHMP4AQ9BY43 222 aa11.34□□□□□ -0.59
SOX2-OT-202ENST00000461063 SEC31BQ9NQW1 1179 aa11.34□□□□□ -0.59
SOX2-OT-202ENST00000461063 CWC25Q9NXE8 425 aaPredicted RBP11.34□□□□□ -0.59
SOX2-OT-202ENST00000461063 CNOT7Q9UIV1 285 aaKnown RBP11.34□□□□□ -0.59
SOX2-OT-202ENST00000461063 PSMD14O00487 310 aa11.33□□□□□ -0.6
SOX2-OT-202ENST00000461063 DDX58O95786 925 aaKnown RBP11.33□□□□□ -0.6
SOX2-OT-202ENST00000461063 CD44P16070 742 aaKnown RBP11.33□□□□□ -0.6
SOX2-OT-202ENST00000461063 CTCFP49711 727 aaPredicted RBP11.33□□□□□ -0.6
SOX2-OT-202ENST00000461063 CCDC27Q2M243 656 aa11.33□□□□□ -0.6
SOX2-OT-202ENST00000461063 TBC1D16Q8TBP0 767 aa11.33□□□□□ -0.6
SOX2-OT-202ENST00000461063 ZC3H15Q8WU90 426 aaKnown RBP11.33□□□□□ -0.6
SOX2-OT-202ENST00000461063 DPF2Q92785 391 aa11.33□□□□□ -0.6
SOX2-OT-202ENST00000461063 TSR2Q969E8 191 aaKnown RBP11.33□□□□□ -0.6
SOX2-OT-202ENST00000461063 GPR101Q96P66 508 aaPredicted RBP11.33□□□□□ -0.6
SOX2-OT-202ENST00000461063 EYA3Q99504 573 aa11.33□□□□□ -0.6
SOX2-OT-202ENST00000461063 GLIS2Q9BZE0 524 aaPredicted RBP11.33□□□□□ -0.6
SOX2-OT-202ENST00000461063 DBNDD1Q9H9R9 158 aa11.33□□□□□ -0.6
SOX2-OT-202ENST00000461063 PRDM10Q9NQV6 1147 aa11.33□□□□□ -0.6
SOX2-OT-202ENST00000461063 KCNQ5Q9NR82 932 aa11.33□□□□□ -0.6
SOX2-OT-202ENST00000461063 PODXL2Q9NZ53 605 aa11.33□□□□□ -0.6
SOX2-OT-202ENST00000461063 MAP3K2Q9Y2U5 619 aa11.33□□□□□ -0.6
SOX2-OT-202ENST00000461063 TAF1P21675 1872 aa11.33□□□□□ -0.6
SOX2-OT-202ENST00000461063 H7C1D1 291 aa11.32□□□□□ -0.6
SOX2-OT-202ENST00000461063 ECE2O60344 883 aa11.32□□□□□ -0.6
SOX2-OT-202ENST00000461063 PDE8AO60658 829 aa11.32□□□□□ -0.6
SOX2-OT-202ENST00000461063 IGKV5-2P06315 115 aa11.32□□□□□ -0.6
SOX2-OT-202ENST00000461063 DOK7Q18PE1 504 aa11.32□□□□□ -0.6
SOX2-OT-202ENST00000461063 CCDC152Q4G0S7 254 aa11.32□□□□□ -0.6
SOX2-OT-202ENST00000461063 WWC1Q8IX03 1113 aa11.32□□□□□ -0.6
SOX2-OT-202ENST00000461063 MICALL2Q8IY33 904 aa11.32□□□□□ -0.6
SOX2-OT-202ENST00000461063 CAPNS2Q96L46 248 aa11.32□□□□□ -0.6
SOX2-OT-202ENST00000461063 TLL2Q9Y6L7 1015 aa11.32□□□□□ -0.6
SOX2-OT-202ENST00000461063 RTL9Q8NET4 1388 aa11.31□□□□□ -0.6
SOX2-OT-202ENST00000461063 PI4KAP2A4QPH2 592 aa11.31□□□□□ -0.6
SOX2-OT-202ENST00000461063 CELF2O95319 508 aaKnown RBP11.31□□□□□ -0.6
SOX2-OT-202ENST00000461063 MAP2K1Q02750 393 aaPredicted RBP11.31□□□□□ -0.6
SOX2-OT-202ENST00000461063 CYP4F22Q6NT55 531 aa11.31□□□□□ -0.6
SOX2-OT-202ENST00000461063 KSR2Q6VAB6 950 aa11.31□□□□□ -0.6
SOX2-OT-202ENST00000461063 PAXIP1Q6ZW49 1069 aaPredicted RBP11.31□□□□□ -0.6
SOX2-OT-202ENST00000461063 PI4KAP1Q8N8J0 262 aa11.31□□□□□ -0.6
SOX2-OT-202ENST00000461063 CCDC85AQ96PX6 553 aaPredicted RBP11.31□□□□□ -0.6
SOX2-OT-202ENST00000461063 ZC3H12CQ9C0D7 883 aaKnown RBP11.31□□□□□ -0.6
SOX2-OT-202ENST00000461063 ANKIB1Q9P2G1 1089 aa11.31□□□□□ -0.6
SOX2-OT-202ENST00000461063 UFL1O94874 794 aa11.3□□□□□ -0.6
SOX2-OT-202ENST00000461063 EGFRP00533 1210 aa11.3□□□□□ -0.6
SOX2-OT-202ENST00000461063 RPS12P25398 132 aaKnown RBP11.3□□□□□ -0.6
SOX2-OT-202ENST00000461063 ECE1P42892 770 aa11.3□□□□□ -0.6
SOX2-OT-202ENST00000461063 LBX1P52954 281 aa11.3□□□□□ -0.6
SOX2-OT-202ENST00000461063 GRM1Q13255 1194 aa11.3□□□□□ -0.6
SOX2-OT-202ENST00000461063 TWISTNBQ3B726 338 aaPredicted RBP11.3□□□□□ -0.6
SOX2-OT-202ENST00000461063 TBC1D10BQ4KMP7 808 aaPredicted RBP11.3□□□□□ -0.6
SOX2-OT-202ENST00000461063 CDC37L1Q7L3B6 337 aa11.3□□□□□ -0.6
SOX2-OT-202ENST00000461063 SAMD7Q7Z3H4 446 aa11.3□□□□□ -0.6
SOX2-OT-202ENST00000461063 SAPCD2Q86UD0 394 aa11.3□□□□□ -0.6
SOX2-OT-202ENST00000461063 STK31Q9BXU1 1019 aa11.3□□□□□ -0.6
SOX2-OT-202ENST00000461063 GGA1Q9UJY5 639 aa11.3□□□□□ -0.6
SOX2-OT-202ENST00000461063 IL16Q14005 1332 aa11.3□□□□□ -0.6
SOX2-OT-202ENST00000461063 VIL1P09327 827 aaKnown RBP11.29□□□□□ -0.6
SOX2-OT-202ENST00000461063 HSPA8P11142 646 aaKnown RBP11.29□□□□□ -0.6
SOX2-OT-202ENST00000461063 CTSWP56202 376 aa11.29□□□□□ -0.6
SOX2-OT-202ENST00000461063 G2E3Q7L622 706 aa11.29□□□□□ -0.6
SOX2-OT-202ENST00000461063 USP48Q86UV5 1035 aa11.29□□□□□ -0.6
SOX2-OT-202ENST00000461063 ANKRD18AQ8IVF6 992 aa11.29□□□□□ -0.6
SOX2-OT-202ENST00000461063 THSD7BQ9C0I4 1608 aa11.28□□□□□ -0.6
SOX2-OT-202ENST00000461063 NEURL1BA8MQ27 555 aa11.28□□□□□ -0.6
SOX2-OT-202ENST00000461063 AOC2O75106 756 aa11.28□□□□□ -0.6
SOX2-OT-202ENST00000461063 NEXNQ0ZGT2 675 aa11.28□□□□□ -0.6
SOX2-OT-202ENST00000461063 CWF19L2Q2TBE0 894 aaKnown RBP11.28□□□□□ -0.6
SOX2-OT-202ENST00000461063 DLK2Q6UY11 383 aa11.28□□□□□ -0.6
SOX2-OT-202ENST00000461063 TTLL11Q8NHH1 800 aa11.28□□□□□ -0.6
SOX2-OT-202ENST00000461063 HHIPL1Q96JK4 782 aa11.28□□□□□ -0.6
SOX2-OT-202ENST00000461063 ZNF408Q9H9D4 720 aa11.28□□□□□ -0.6
SOX2-OT-202ENST00000461063 MRS2Q9HD23 443 aa11.28□□□□□ -0.6
SOX2-OT-202ENST00000461063 XDHP47989 1333 aa11.28□□□□□ -0.6
SOX2-OT-202ENST00000461063 G3V3G9 751 aa11.27□□□□□ -0.61
SOX2-OT-202ENST00000461063 H7C1W4 665 aa11.27□□□□□ -0.61
SOX2-OT-202ENST00000461063 MAP2K2P36507 400 aa11.27□□□□□ -0.61
SOX2-OT-202ENST00000461063 RBM26Q5T8P6 1007 aaKnown RBP11.27□□□□□ -0.61
SOX2-OT-202ENST00000461063 DCAF8Q5TAQ9 597 aa11.27□□□□□ -0.61
SOX2-OT-202ENST00000461063 KRT26Q7Z3Y9 468 aa11.27□□□□□ -0.61
SOX2-OT-202ENST00000461063 CDC5LQ99459 802 aaKnown RBP11.27□□□□□ -0.61
SOX2-OT-202ENST00000461063 GREM2Q9H772 168 aa11.27□□□□□ -0.61
SOX2-OT-202ENST00000461063 WTIPA6NIX2 430 aaPredicted RBP11.26□□□□□ -0.61
SOX2-OT-202ENST00000461063 ATP2B4P23634 1241 aa11.26□□□□□ -0.61
SOX2-OT-202ENST00000461063 FLIIQ13045 1269 aa11.26□□□□□ -0.61
SOX2-OT-202ENST00000461063 KIF4BQ2VIQ3 1234 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms