RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 GMPSP49915 693 aaPredicted RBP16.75■□□□□ 0.27
RAB11FIP3-207ENST00000461009 CWF19L2Q2TBE0 894 aaKnown RBP16.75■□□□□ 0.27
RAB11FIP3-207ENST00000461009 SLC4A10Q6U841 1118 aa16.75■□□□□ 0.27
RAB11FIP3-207ENST00000461009 JARID2Q92833 1246 aaPredicted RBP16.75■□□□□ 0.27
RAB11FIP3-207ENST00000461009 GGA1Q9UJY5 639 aa16.75■□□□□ 0.27
RAB11FIP3-207ENST00000461009 TAF1P21675 1872 aa16.74■□□□□ 0.27
RAB11FIP3-207ENST00000461009 CTSWP56202 376 aa16.74■□□□□ 0.27
RAB11FIP3-207ENST00000461009 GCKRQ14397 625 aa16.74■□□□□ 0.27
RAB11FIP3-207ENST00000461009 BEND3Q5T5X7 828 aa16.74■□□□□ 0.27
RAB11FIP3-207ENST00000461009 TBC1D16Q8TBP0 767 aa16.74■□□□□ 0.27
RAB11FIP3-207ENST00000461009 CCDC85AQ96PX6 553 aaPredicted RBP16.74■□□□□ 0.27
RAB11FIP3-207ENST00000461009 SEC31BQ9NQW1 1179 aa16.74■□□□□ 0.27
RAB11FIP3-207ENST00000461009 PODXL2Q9NZ53 605 aa16.74■□□□□ 0.27
RAB11FIP3-207ENST00000461009 POLLQ9UGP5 575 aa16.74■□□□□ 0.27
RAB11FIP3-207ENST00000461009 MKRN1Q9UHC7 482 aaKnown RBP16.74■□□□□ 0.27
RAB11FIP3-207ENST00000461009 H7C1W4 665 aa16.73■□□□□ 0.27
RAB11FIP3-207ENST00000461009 IPO8O15397 1037 aaKnown RBP16.73■□□□□ 0.27
RAB11FIP3-207ENST00000461009 ALDH1L1O75891 902 aa16.73■□□□□ 0.27
RAB11FIP3-207ENST00000461009 UFL1O94874 794 aa16.73■□□□□ 0.27
RAB11FIP3-207ENST00000461009 SRCIN1Q9C0H9 1055 aa16.73■□□□□ 0.27
RAB11FIP3-207ENST00000461009 UBE3BQ7Z3V4 1068 aa16.72■□□□□ 0.27
RAB11FIP3-207ENST00000461009 API5Q9BZZ5 524 aaKnown RBP16.72■□□□□ 0.27
RAB11FIP3-207ENST00000461009 DBNDD1Q9H9R9 158 aa16.72■□□□□ 0.27
RAB11FIP3-207ENST00000461009 CNOT7Q9UIV1 285 aaKnown RBP16.72■□□□□ 0.27
RAB11FIP3-207ENST00000461009 ABT1Q9ULW3 272 aaKnown RBP16.72■□□□□ 0.27
RAB11FIP3-207ENST00000461009 NOB1Q9ULX3 412 aaKnown RBP16.72■□□□□ 0.27
RAB11FIP3-207ENST00000461009 LRRC37AA6NMS7 1700 aa16.72■□□□□ 0.27
RAB11FIP3-207ENST00000461009 KIF16BQ96L93 1317 aa16.71■□□□□ 0.27
RAB11FIP3-207ENST00000461009 ECE2O60344 883 aa16.71■□□□□ 0.27
RAB11FIP3-207ENST00000461009 ATP2B4P23634 1241 aa16.71■□□□□ 0.27
RAB11FIP3-207ENST00000461009 RPS12P25398 132 aaKnown RBP16.71■□□□□ 0.27
RAB11FIP3-207ENST00000461009 IGHMBP2P38935 993 aaKnown RBP16.71■□□□□ 0.27
RAB11FIP3-207ENST00000461009 DOK7Q18PE1 504 aa16.71■□□□□ 0.27
RAB11FIP3-207ENST00000461009 IFFO2Q5TF58 517 aa16.71■□□□□ 0.27
RAB11FIP3-207ENST00000461009 TTLL11Q8NHH1 800 aa16.71■□□□□ 0.27
RAB11FIP3-207ENST00000461009 ZC3H15Q8WU90 426 aaKnown RBP16.71■□□□□ 0.27
RAB11FIP3-207ENST00000461009 ARHGAP45Q92619 1136 aa16.71■□□□□ 0.27
RAB11FIP3-207ENST00000461009 DPF2Q92785 391 aa16.71■□□□□ 0.27
RAB11FIP3-207ENST00000461009 C9orf78Q9NZ63 289 aaPredicted RBP16.71■□□□□ 0.27
RAB11FIP3-207ENST00000461009 XDHP47989 1333 aa16.7■□□□□ 0.26
RAB11FIP3-207ENST00000461009 ADAMTSL1Q8N6G6 1762 aa16.7■□□□□ 0.26
RAB11FIP3-207ENST00000461009 CNTNAP1P78357 1384 aa16.7■□□□□ 0.26
RAB11FIP3-207ENST00000461009 YDJCA8MPS7 323 aa16.7■□□□□ 0.26
RAB11FIP3-207ENST00000461009 DEFB115Q30KQ5 88 aa16.7■□□□□ 0.26
RAB11FIP3-207ENST00000461009 PSMD14O00487 310 aa16.69■□□□□ 0.26
RAB11FIP3-207ENST00000461009 MICALL2Q8IY33 904 aa16.69■□□□□ 0.26
RAB11FIP3-207ENST00000461009 BSDC1Q9NW68 430 aaPredicted RBP16.69■□□□□ 0.26
RAB11FIP3-207ENST00000461009 RTL9Q8NET4 1388 aa16.68■□□□□ 0.26
RAB11FIP3-207ENST00000461009 GRM8O00222 908 aa16.68■□□□□ 0.26
RAB11FIP3-207ENST00000461009 HSPA1AP0DMV8 641 aaKnown RBP16.68■□□□□ 0.26
RAB11FIP3-207ENST00000461009 HSPA1BP0DMV9 641 aaKnown RBP16.68■□□□□ 0.26
RAB11FIP3-207ENST00000461009 CCT4P50991 539 aaKnown RBP16.68■□□□□ 0.26
RAB11FIP3-207ENST00000461009 MPHOSPH8Q99549 860 aa16.68■□□□□ 0.26
RAB11FIP3-207ENST00000461009 PLA2G12BQ9BX93 195 aa16.68■□□□□ 0.26
RAB11FIP3-207ENST00000461009 GREM2Q9H772 168 aa16.68■□□□□ 0.26
RAB11FIP3-207ENST00000461009 DUOX1Q9NRD9 1551 aa16.68■□□□□ 0.26
RAB11FIP3-207ENST00000461009 LTBP1Q14766 1721 aa16.67■□□□□ 0.26
RAB11FIP3-207ENST00000461009 MYH3P11055 1940 aa16.67■□□□□ 0.26
RAB11FIP3-207ENST00000461009 BCAR3O75815 825 aa16.67■□□□□ 0.26
RAB11FIP3-207ENST00000461009 CDC37L1Q7L3B6 337 aa16.67■□□□□ 0.26
RAB11FIP3-207ENST00000461009 AIDAQ96BJ3 306 aa16.67■□□□□ 0.26
RAB11FIP3-207ENST00000461009 ZBTB12Q9Y330 459 aaPredicted RBP16.67■□□□□ 0.26
RAB11FIP3-207ENST00000461009 RASSF10A6NK89 507 aa16.66■□□□□ 0.26
RAB11FIP3-207ENST00000461009 ECE1P42892 770 aa16.66■□□□□ 0.26
RAB11FIP3-207ENST00000461009 VEGFBP49765 207 aa16.66■□□□□ 0.26
RAB11FIP3-207ENST00000461009 PAXIP1Q6ZW49 1069 aaPredicted RBP16.66■□□□□ 0.26
RAB11FIP3-207ENST00000461009 FRAT1Q92837 279 aaPredicted RBP16.66■□□□□ 0.26
RAB11FIP3-207ENST00000461009 GPR101Q96P66 508 aaPredicted RBP16.66■□□□□ 0.26
RAB11FIP3-207ENST00000461009 ANKRD2Q9GZV1 360 aa16.66■□□□□ 0.26
RAB11FIP3-207ENST00000461009 PGAP2Q9UHJ9 254 aa16.66■□□□□ 0.26
RAB11FIP3-207ENST00000461009 MINPP1Q9UNW1 487 aa16.66■□□□□ 0.26
RAB11FIP3-207ENST00000461009 ANKRD18BA2A2Z9 1011 aa16.65■□□□□ 0.26
RAB11FIP3-207ENST00000461009 VIL1P09327 827 aaKnown RBP16.65■□□□□ 0.26
RAB11FIP3-207ENST00000461009 ITGA6P23229 1130 aa16.65■□□□□ 0.26
RAB11FIP3-207ENST00000461009 CASP7P55210 303 aa16.65■□□□□ 0.26
RAB11FIP3-207ENST00000461009 PODNQ7Z5L7 613 aa16.65■□□□□ 0.26
RAB11FIP3-207ENST00000461009 HDAC5Q9UQL6 1122 aa16.65■□□□□ 0.26
RAB11FIP3-207ENST00000461009 LEMD3Q9Y2U8 911 aa16.65■□□□□ 0.26
RAB11FIP3-207ENST00000461009 TRAF5O00463 557 aa16.64■□□□□ 0.25
RAB11FIP3-207ENST00000461009 KCNJ4P48050 445 aa16.64■□□□□ 0.25
RAB11FIP3-207ENST00000461009 RBM26Q5T8P6 1007 aaKnown RBP16.64■□□□□ 0.25
RAB11FIP3-207ENST00000461009 ZKSCAN2Q63HK3 967 aa16.64■□□□□ 0.25
RAB11FIP3-207ENST00000461009 ATF7IPQ6VMQ6 1270 aa16.64■□□□□ 0.25
RAB11FIP3-207ENST00000461009 DCPSQ96C86 337 aaKnown RBP16.64■□□□□ 0.25
RAB11FIP3-207ENST00000461009 YTHDC1Q96MU7 727 aaKnown RBP16.64■□□□□ 0.25
RAB11FIP3-207ENST00000461009 CHMP3Q9Y3E7 222 aa16.64■□□□□ 0.25
RAB11FIP3-207ENST00000461009 CELF2O95319 508 aaKnown RBP16.63■□□□□ 0.25
RAB11FIP3-207ENST00000461009 CSF1RP07333 972 aa16.63■□□□□ 0.25
RAB11FIP3-207ENST00000461009 HIRAP54198 1017 aaPredicted RBP16.63■□□□□ 0.25
RAB11FIP3-207ENST00000461009 IFIT5Q13325 482 aaKnown RBP16.63■□□□□ 0.25
RAB11FIP3-207ENST00000461009 SAMD7Q7Z3H4 446 aa16.63■□□□□ 0.25
RAB11FIP3-207ENST00000461009 AGBL3Q8NEM8 1001 aa16.63■□□□□ 0.25
RAB11FIP3-207ENST00000461009 TRPM4Q8TD43 1214 aa16.63■□□□□ 0.25
RAB11FIP3-207ENST00000461009 KCNQ5Q9NR82 932 aa16.63■□□□□ 0.25
RAB11FIP3-207ENST00000461009 WDR33Q9C0J8 1336 aaKnown RBP16.63■□□□□ 0.25
RAB11FIP3-207ENST00000461009 USP17L3A6NCW0 530 aa16.62■□□□□ 0.25
RAB11FIP3-207ENST00000461009 USP17L4A6NCW7 530 aa16.62■□□□□ 0.25
RAB11FIP3-207ENST00000461009 MAP2K1Q02750 393 aaPredicted RBP16.62■□□□□ 0.25
RAB11FIP3-207ENST00000461009 FAM161AQ3B820 660 aa16.62■□□□□ 0.25
RAB11FIP3-207ENST00000461009 TBC1D10BQ4KMP7 808 aaPredicted RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms