RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 CEP85Q6P2H3 762 aa13.66□□□□□ -0.22
SMNDC1-203ENST00000460483 EXOC6Q8TAG9 804 aa13.66□□□□□ -0.22
SMNDC1-203ENST00000460483 SYT17Q9BSW7 474 aa13.66□□□□□ -0.22
SMNDC1-203ENST00000460483 ANKRD2Q9GZV1 360 aa13.66□□□□□ -0.22
SMNDC1-203ENST00000460483 CNNM1Q9NRU3 951 aa13.66□□□□□ -0.22
SMNDC1-203ENST00000460483 BSDC1Q9NW68 430 aaPredicted RBP13.66□□□□□ -0.22
SMNDC1-203ENST00000460483 COL24A1Q17RW2 1714 aa13.66□□□□□ -0.22
SMNDC1-203ENST00000460483 CIAO1O76071 339 aa13.65□□□□□ -0.22
SMNDC1-203ENST00000460483 DPEP1P16444 411 aa13.65□□□□□ -0.22
SMNDC1-203ENST00000460483 IL15P40933 162 aaPredicted RBP13.65□□□□□ -0.22
SMNDC1-203ENST00000460483 OS9Q13438 667 aaPredicted RBP13.65□□□□□ -0.22
SMNDC1-203ENST00000460483 RTKN2Q8IZC4 609 aa13.65□□□□□ -0.22
SMNDC1-203ENST00000460483 SSH3Q8TE77 659 aa13.65□□□□□ -0.22
SMNDC1-203ENST00000460483 KAZALD1Q96I82 304 aa13.65□□□□□ -0.22
SMNDC1-203ENST00000460483 TSPYL2Q9H2G4 693 aaPredicted RBP13.65□□□□□ -0.22
SMNDC1-203ENST00000460483 COPRSQ9NQ92 184 aa13.65□□□□□ -0.22
SMNDC1-203ENST00000460483 MROH5Q6ZUA9 1318 aa13.64□□□□□ -0.23
SMNDC1-203ENST00000460483 A0A0G2JLW4 131 aa13.64□□□□□ -0.23
SMNDC1-203ENST00000460483 PPEF1O14829 653 aaPredicted RBP13.64□□□□□ -0.23
SMNDC1-203ENST00000460483 RAB11FIP3O75154 756 aa13.64□□□□□ -0.23
SMNDC1-203ENST00000460483 CHRNA5P30532 468 aa13.64□□□□□ -0.23
SMNDC1-203ENST00000460483 EPHA10Q5JZY3 1008 aa13.64□□□□□ -0.23
SMNDC1-203ENST00000460483 SP8Q8IXZ3 490 aa13.64□□□□□ -0.23
SMNDC1-203ENST00000460483 CCDC85AQ96PX6 553 aaPredicted RBP13.64□□□□□ -0.23
SMNDC1-203ENST00000460483 C1orf115Q9H7X2 142 aa13.64□□□□□ -0.23
SMNDC1-203ENST00000460483 SURF6O75683 361 aaKnown RBP13.63□□□□□ -0.23
SMNDC1-203ENST00000460483 IRX6P78412 446 aaPredicted RBP13.63□□□□□ -0.23
SMNDC1-203ENST00000460483 HDAC1Q13547 482 aaPredicted RBP13.63□□□□□ -0.23
SMNDC1-203ENST00000460483 PRPF40BQ6NWY9 871 aaKnown RBP13.63□□□□□ -0.23
SMNDC1-203ENST00000460483 SUPT20HQ8NEM7 779 aa13.63□□□□□ -0.23
SMNDC1-203ENST00000460483 GCC1Q96CN9 775 aa13.63□□□□□ -0.23
SMNDC1-203ENST00000460483 AKAP2Q9Y2D5 859 aa13.63□□□□□ -0.23
SMNDC1-203ENST00000460483 ATP6V0A2Q9Y487 856 aa13.63□□□□□ -0.23
SMNDC1-203ENST00000460483 NRXN2Q9P2S2 1712 aa13.63□□□□□ -0.23
SMNDC1-203ENST00000460483 EYA2O00167 538 aa13.62□□□□□ -0.23
SMNDC1-203ENST00000460483 GRIN3BO60391 1043 aa13.62□□□□□ -0.23
SMNDC1-203ENST00000460483 KCNJ4P48050 445 aa13.62□□□□□ -0.23
SMNDC1-203ENST00000460483 CCDC93Q567U6 631 aa13.62□□□□□ -0.23
SMNDC1-203ENST00000460483 ANKIB1Q9P2G1 1089 aa13.62□□□□□ -0.23
SMNDC1-203ENST00000460483 CEP126Q9P2H0 1117 aa13.62□□□□□ -0.23
SMNDC1-203ENST00000460483 METTL24Q5JXM2 366 aa13.61□□□□□ -0.23
SMNDC1-203ENST00000460483 C3orf67Q6ZVT6 689 aa13.61□□□□□ -0.23
SMNDC1-203ENST00000460483 EYA3Q99504 573 aa13.61□□□□□ -0.23
SMNDC1-203ENST00000460483 SEC31BQ9NQW1 1179 aa13.61□□□□□ -0.23
SMNDC1-203ENST00000460483 BCS1LQ9Y276 419 aa13.61□□□□□ -0.23
SMNDC1-203ENST00000460483 NOP58Q9Y2X3 529 aaKnown RBP13.61□□□□□ -0.23
SMNDC1-203ENST00000460483 PNMA6EA0A0J9YXQ4 647 aa13.6□□□□□ -0.23
SMNDC1-203ENST00000460483 KCNA3P22001 575 aa13.6□□□□□ -0.23
SMNDC1-203ENST00000460483 PTPN12Q05209 780 aaKnown RBP13.6□□□□□ -0.23
SMNDC1-203ENST00000460483 DPP8Q6V1X1 898 aaPredicted RBP13.6□□□□□ -0.23
SMNDC1-203ENST00000460483 CELF1Q92879 486 aaKnown RBP13.6□□□□□ -0.23
SMNDC1-203ENST00000460483 KIF1BPQ96EK5 621 aa13.6□□□□□ -0.23
SMNDC1-203ENST00000460483 MS4A3Q96HJ5 214 aa13.6□□□□□ -0.23
SMNDC1-203ENST00000460483 CCDC136Q96JN2 1154 aa13.6□□□□□ -0.23
SMNDC1-203ENST00000460483 VPS33BQ9H267 617 aa13.6□□□□□ -0.23
SMNDC1-203ENST00000460483 NSFL1CQ9UNZ2 370 aaKnown RBP13.6□□□□□ -0.23
SMNDC1-203ENST00000460483 LEMD3Q9Y2U8 911 aa13.6□□□□□ -0.23
SMNDC1-203ENST00000460483 N4BP2Q86UW6 1770 aaPredicted RBP13.6□□□□□ -0.23
SMNDC1-203ENST00000460483 XDHP47989 1333 aa13.6□□□□□ -0.23
SMNDC1-203ENST00000460483 AFDNP55196 1824 aaKnown RBP13.6□□□□□ -0.23
SMNDC1-203ENST00000460483 ATP2B4P23634 1241 aa13.59□□□□□ -0.23
SMNDC1-203ENST00000460483 GPR162Q16538 588 aa13.59□□□□□ -0.23
SMNDC1-203ENST00000460483 CLASRPQ8N2M8 674 aaKnown RBP13.59□□□□□ -0.23
SMNDC1-203ENST00000460483 MPNDQ8N594 471 aa13.59□□□□□ -0.23
SMNDC1-203ENST00000460483 PPP4R2Q9NY27 417 aa13.59□□□□□ -0.23
SMNDC1-203ENST00000460483 LRP5O75197 1615 aa13.59□□□□□ -0.23
SMNDC1-203ENST00000460483 IFIT1P09914 478 aaKnown RBP13.58□□□□□ -0.24
SMNDC1-203ENST00000460483 RFX5P48382 616 aaPredicted RBP13.58□□□□□ -0.24
SMNDC1-203ENST00000460483 NLGN2Q8NFZ4 835 aa13.58□□□□□ -0.24
SMNDC1-203ENST00000460483 SIL1Q9H173 461 aa13.58□□□□□ -0.24
SMNDC1-203ENST00000460483 DCTPP1Q9H773 170 aa13.58□□□□□ -0.24
SMNDC1-203ENST00000460483 PODXL2Q9NZ53 605 aa13.58□□□□□ -0.24
SMNDC1-203ENST00000460483 GGA1Q9UJY5 639 aa13.58□□□□□ -0.24
SMNDC1-203ENST00000460483 MINPP1Q9UNW1 487 aa13.58□□□□□ -0.24
SMNDC1-203ENST00000460483 PCDHB15Q9Y5E8 787 aa13.58□□□□□ -0.24
SMNDC1-203ENST00000460483 G3V3G9 751 aa13.57□□□□□ -0.24
SMNDC1-203ENST00000460483 C21orf2O43822 256 aa13.57□□□□□ -0.24
SMNDC1-203ENST00000460483 PDE8BO95263 885 aa13.57□□□□□ -0.24
SMNDC1-203ENST00000460483 CHRNDQ07001 517 aa13.57□□□□□ -0.24
SMNDC1-203ENST00000460483 UBE4AQ14139 1066 aa13.57□□□□□ -0.24
SMNDC1-203ENST00000460483 PUM3Q15397 648 aaKnown RBP13.57□□□□□ -0.24
SMNDC1-203ENST00000460483 CAVIN4Q5BKX8 364 aa13.57□□□□□ -0.24
SMNDC1-203ENST00000460483 DCAF8Q5TAQ9 597 aa13.57□□□□□ -0.24
SMNDC1-203ENST00000460483 PELP1Q8IZL8 1130 aaKnown RBP13.57□□□□□ -0.24
SMNDC1-203ENST00000460483 ZNF594Q96JF6 807 aaPredicted RBP13.57□□□□□ -0.24
SMNDC1-203ENST00000460483 LRRCC1Q9C099 1032 aa13.57□□□□□ -0.24
SMNDC1-203ENST00000460483 ZC3H12CQ9C0D7 883 aaKnown RBP13.57□□□□□ -0.24
SMNDC1-203ENST00000460483 GPR108Q9NPR9 543 aa13.57□□□□□ -0.24
SMNDC1-203ENST00000460483 RIPOR2Q9Y4F9 1068 aa13.57□□□□□ -0.24
SMNDC1-203ENST00000460483 C6orf229H3BNL8 230 aa13.56□□□□□ -0.24
SMNDC1-203ENST00000460483 SLC5A1P13866 664 aa13.56□□□□□ -0.24
SMNDC1-203ENST00000460483 CENPQQ7L2Z9 268 aaPredicted RBP13.56□□□□□ -0.24
SMNDC1-203ENST00000460483 VPS37DQ86XT2 251 aa13.56□□□□□ -0.24
SMNDC1-203ENST00000460483 LPIN2Q92539 896 aa13.56□□□□□ -0.24
SMNDC1-203ENST00000460483 GPATCH3Q96I76 525 aa13.56□□□□□ -0.24
SMNDC1-203ENST00000460483 PSMD1Q99460 953 aa13.56□□□□□ -0.24
SMNDC1-203ENST00000460483 TAOK3Q9H2K8 898 aa13.56□□□□□ -0.24
SMNDC1-203ENST00000460483 GORABQ5T7V8 394 aa13.55□□□□□ -0.24
SMNDC1-203ENST00000460483 SIRT2Q8IXJ6 389 aa13.55□□□□□ -0.24
SMNDC1-203ENST00000460483 C7orf43Q8WVR3 580 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms