RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 PNMA8AQ86V59 439 aaPredicted RBP19.8■□□□□ 0.76
SDF4-204ENST00000459994 CNTROBQ8N137 903 aa19.8■□□□□ 0.76
SDF4-204ENST00000459994 TBC1D16Q8TBP0 767 aa19.8■□□□□ 0.76
SDF4-204ENST00000459994 GPRC5DQ9NZD1 345 aa19.8■□□□□ 0.76
SDF4-204ENST00000459994 MKRN1Q9UHC7 482 aaKnown RBP19.8■□□□□ 0.76
SDF4-204ENST00000459994 F6X3S4 739 aa19.79■□□□□ 0.76
SDF4-204ENST00000459994 C6orf229H3BNL8 230 aa19.79■□□□□ 0.76
SDF4-204ENST00000459994 BRPF1P55201 1214 aaPredicted RBP19.79■□□□□ 0.76
SDF4-204ENST00000459994 CTSWP56202 376 aa19.79■□□□□ 0.76
SDF4-204ENST00000459994 FKBP5Q13451 457 aaPredicted RBP19.79■□□□□ 0.76
SDF4-204ENST00000459994 DOK7Q18PE1 504 aa19.79■□□□□ 0.76
SDF4-204ENST00000459994 WASHC4Q2M389 1173 aa19.79■□□□□ 0.76
SDF4-204ENST00000459994 CCDC152Q4G0S7 254 aa19.79■□□□□ 0.76
SDF4-204ENST00000459994 UBE3BQ7Z3V4 1068 aa19.79■□□□□ 0.76
SDF4-204ENST00000459994 TTLL11Q8NHH1 800 aa19.79■□□□□ 0.76
SDF4-204ENST00000459994 SSH1Q8WYL5 1049 aa19.79■□□□□ 0.76
SDF4-204ENST00000459994 CREBZFQ9NS37 354 aa19.79■□□□□ 0.76
SDF4-204ENST00000459994 H7C1W4 665 aa19.78■□□□□ 0.76
SDF4-204ENST00000459994 CASP7P55210 303 aa19.78■□□□□ 0.76
SDF4-204ENST00000459994 GREM2Q9H772 168 aa19.78■□□□□ 0.76
SDF4-204ENST00000459994 ZBTB12Q9Y330 459 aaPredicted RBP19.78■□□□□ 0.76
SDF4-204ENST00000459994 RTL9Q8NET4 1388 aa19.78■□□□□ 0.76
SDF4-204ENST00000459994 NEXNQ0ZGT2 675 aa19.77■□□□□ 0.76
SDF4-204ENST00000459994 GCKRQ14397 625 aa19.77■□□□□ 0.76
SDF4-204ENST00000459994 DNAAF4Q8WXU2 420 aa19.77■□□□□ 0.76
SDF4-204ENST00000459994 PSMD14O00487 310 aa19.76■□□□□ 0.75
SDF4-204ENST00000459994 ECE2O60344 883 aa19.76■□□□□ 0.75
SDF4-204ENST00000459994 HIRAP54198 1017 aaPredicted RBP19.76■□□□□ 0.75
SDF4-204ENST00000459994 MRPL50Q8N5N7 158 aaKnown RBP19.76■□□□□ 0.75
SDF4-204ENST00000459994 TRPM4Q8TD43 1214 aa19.76■□□□□ 0.75
SDF4-204ENST00000459994 SMC4Q9NTJ3 1288 aa19.76■□□□□ 0.75
SDF4-204ENST00000459994 PODXL2Q9NZ53 605 aa19.76■□□□□ 0.75
SDF4-204ENST00000459994 TRAF5O00463 557 aa19.75■□□□□ 0.75
SDF4-204ENST00000459994 UFL1O94874 794 aa19.75■□□□□ 0.75
SDF4-204ENST00000459994 USP50Q70EL3 339 aaPredicted RBP19.75■□□□□ 0.75
SDF4-204ENST00000459994 ANKRD18AQ8IVF6 992 aa19.75■□□□□ 0.75
SDF4-204ENST00000459994 ADARB2Q9NS39 739 aaKnown RBP19.75■□□□□ 0.75
SDF4-204ENST00000459994 CNTNAP1P78357 1384 aa19.74■□□□□ 0.75
SDF4-204ENST00000459994 TMEM88BA6NKF7 163 aa19.74■□□□□ 0.75
SDF4-204ENST00000459994 BCAR3O75815 825 aa19.74■□□□□ 0.75
SDF4-204ENST00000459994 BCL2L13Q9BXK5 485 aa19.74■□□□□ 0.75
SDF4-204ENST00000459994 ANKIB1Q9P2G1 1089 aa19.74■□□□□ 0.75
SDF4-204ENST00000459994 EGFRP00533 1210 aa19.73■□□□□ 0.75
SDF4-204ENST00000459994 HSP90B1P14625 803 aaKnown RBP19.73■□□□□ 0.75
SDF4-204ENST00000459994 TNIP1Q15025 636 aa19.73■□□□□ 0.75
SDF4-204ENST00000459994 CNOT7Q9UIV1 285 aaKnown RBP19.73■□□□□ 0.75
SDF4-204ENST00000459994 FAM161AQ3B820 660 aa19.72■□□□□ 0.75
SDF4-204ENST00000459994 BEND3Q5T5X7 828 aa19.72■□□□□ 0.75
SDF4-204ENST00000459994 MICALL2Q8IY33 904 aa19.72■□□□□ 0.75
SDF4-204ENST00000459994 LINS1Q8NG48 757 aa19.72■□□□□ 0.75
SDF4-204ENST00000459994 EYA3Q99504 573 aa19.72■□□□□ 0.75
SDF4-204ENST00000459994 GGA1Q9UJY5 639 aa19.72■□□□□ 0.75
SDF4-204ENST00000459994 HSPA1AP0DMV8 641 aaKnown RBP19.71■□□□□ 0.75
SDF4-204ENST00000459994 HSPA1BP0DMV9 641 aaKnown RBP19.71■□□□□ 0.75
SDF4-204ENST00000459994 DLK2Q6UY11 383 aa19.71■□□□□ 0.75
SDF4-204ENST00000459994 SAMD7Q7Z3H4 446 aa19.71■□□□□ 0.75
SDF4-204ENST00000459994 PLA2G12BQ9BX93 195 aa19.71■□□□□ 0.75
SDF4-204ENST00000459994 MINPP1Q9UNW1 487 aa19.71■□□□□ 0.75
SDF4-204ENST00000459994 KIF16BQ96L93 1317 aa19.71■□□□□ 0.75
SDF4-204ENST00000459994 VEGFBP49765 207 aa19.7■□□□□ 0.74
SDF4-204ENST00000459994 CST9Q5W186 159 aa19.7■□□□□ 0.74
SDF4-204ENST00000459994 CDC5LQ99459 802 aaKnown RBP19.7■□□□□ 0.74
SDF4-204ENST00000459994 GLIS2Q9BZE0 524 aaPredicted RBP19.7■□□□□ 0.74
SDF4-204ENST00000459994 ZC3H12CQ9C0D7 883 aaKnown RBP19.7■□□□□ 0.74
SDF4-204ENST00000459994 XDHP47989 1333 aa19.7■□□□□ 0.74
SDF4-204ENST00000459994 IPO8O15397 1037 aaKnown RBP19.69■□□□□ 0.74
SDF4-204ENST00000459994 CSF1RP07333 972 aa19.69■□□□□ 0.74
SDF4-204ENST00000459994 ITGA6P23229 1130 aa19.69■□□□□ 0.74
SDF4-204ENST00000459994 FOXO4P98177 505 aa19.69■□□□□ 0.74
SDF4-204ENST00000459994 EPHA10Q5JZY3 1008 aa19.69■□□□□ 0.74
SDF4-204ENST00000459994 ARHGAP45Q92619 1136 aa19.69■□□□□ 0.74
SDF4-204ENST00000459994 BSDC1Q9NW68 430 aaPredicted RBP19.69■□□□□ 0.74
SDF4-204ENST00000459994 THSD7BQ9C0I4 1608 aa19.69■□□□□ 0.74
SDF4-204ENST00000459994 TBC1D10BQ4KMP7 808 aaPredicted RBP19.68■□□□□ 0.74
SDF4-204ENST00000459994 COL13A1Q5TAT6 717 aaPredicted RBP19.68■□□□□ 0.74
SDF4-204ENST00000459994 TXNRD3Q86VQ6 643 aa19.68■□□□□ 0.74
SDF4-204ENST00000459994 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.68■□□□□ 0.74
SDF4-204ENST00000459994 PGAP2Q9UHJ9 254 aa19.68■□□□□ 0.74
SDF4-204ENST00000459994 NOB1Q9ULX3 412 aaKnown RBP19.68■□□□□ 0.74
SDF4-204ENST00000459994 PTPRCP08575 1304 aa19.68■□□□□ 0.74
SDF4-204ENST00000459994 VIL1P09327 827 aaKnown RBP19.67■□□□□ 0.74
SDF4-204ENST00000459994 ATP2B4P23634 1241 aa19.67■□□□□ 0.74
SDF4-204ENST00000459994 KLRK1P26718 216 aa19.67■□□□□ 0.74
SDF4-204ENST00000459994 DPF2Q92785 391 aa19.67■□□□□ 0.74
SDF4-204ENST00000459994 RASSF10A6NK89 507 aa19.66■□□□□ 0.74
SDF4-204ENST00000459994 CCT4P50991 539 aaKnown RBP19.66■□□□□ 0.74
SDF4-204ENST00000459994 RBM26Q5T8P6 1007 aaKnown RBP19.66■□□□□ 0.74
SDF4-204ENST00000459994 IFFO2Q5TF58 517 aa19.66■□□□□ 0.74
SDF4-204ENST00000459994 ZKSCAN2Q63HK3 967 aa19.66■□□□□ 0.74
SDF4-204ENST00000459994 SUPT16HQ9Y5B9 1047 aaKnown RBP19.66■□□□□ 0.74
SDF4-204ENST00000459994 ASTN2O75129 1339 aaPredicted RBP19.66■□□□□ 0.74
SDF4-204ENST00000459994 H7C1D1 291 aa19.65■□□□□ 0.74
SDF4-204ENST00000459994 SNAP23O00161 211 aa19.65■□□□□ 0.74
SDF4-204ENST00000459994 RRP1P56182 461 aaKnown RBP19.65■□□□□ 0.74
SDF4-204ENST00000459994 FRAT1Q92837 279 aaPredicted RBP19.65■□□□□ 0.74
SDF4-204ENST00000459994 MXD3Q9BW11 206 aa19.65■□□□□ 0.74
SDF4-204ENST00000459994 API5Q9BZZ5 524 aaKnown RBP19.65■□□□□ 0.74
SDF4-204ENST00000459994 ABT1Q9ULW3 272 aaKnown RBP19.65■□□□□ 0.74
SDF4-204ENST00000459994 MED23Q9ULK4 1368 aa19.65■□□□□ 0.74
SDF4-204ENST00000459994 DEFB115Q30KQ5 88 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms