RNA–Protein interactions for RNA: ENST00000458642.5

HDAC11-216, Transcript of histone deacetylase 11, humanhuman

TSL 5

Gene HDAC11, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-216ENST00000458642 MYD88Q99836 296 aa24.07■■□□□ 1.44
HDAC11-216ENST00000458642 ADM5C9JUS6 153 aa24.06■■□□□ 1.44
HDAC11-216ENST00000458642 ZBTB38Q8NAP3 1195 aaPredicted RBP24.06■■□□□ 1.44
HDAC11-216ENST00000458642 CCDC85AQ96PX6 553 aaPredicted RBP24.06■■□□□ 1.44
HDAC11-216ENST00000458642 PRKRIP1Q9H875 184 aaPredicted RBP24.06■■□□□ 1.44
HDAC11-216ENST00000458642 POLR2AP24928 1970 aaKnown RBP24.05■■□□□ 1.44
HDAC11-216ENST00000458642 GOLGA2Q08379 1002 aa24.05■■□□□ 1.44
HDAC11-216ENST00000458642 C8orf58Q8NAV2 365 aa24.05■■□□□ 1.44
HDAC11-216ENST00000458642 HHIPL1Q96JK4 782 aa24.05■■□□□ 1.44
HDAC11-216ENST00000458642 ASTN2O75129 1339 aaPredicted RBP24.05■■□□□ 1.44
HDAC11-216ENST00000458642 IFT57Q9NWB7 429 aa24.04■■□□□ 1.44
HDAC11-216ENST00000458642 HUNKP57058 714 aa24.03■■□□□ 1.44
HDAC11-216ENST00000458642 KRT26Q7Z3Y9 468 aa24.03■■□□□ 1.44
HDAC11-216ENST00000458642 UFL1O94874 794 aa24.02■■□□□ 1.44
HDAC11-216ENST00000458642 BRPF1P55201 1214 aaPredicted RBP24.02■■□□□ 1.44
HDAC11-216ENST00000458642 EYA3Q99504 573 aa24.02■■□□□ 1.44
HDAC11-216ENST00000458642 CASP8AP2Q9UKL3 1982 aa24.02■■□□□ 1.43
HDAC11-216ENST00000458642 PODXL2Q9NZ53 605 aa24.01■■□□□ 1.43
HDAC11-216ENST00000458642 WTIPA6NIX2 430 aaPredicted RBP24■■□□□ 1.43
HDAC11-216ENST00000458642 CCDC85CA6NKD9 419 aa24■■□□□ 1.43
HDAC11-216ENST00000458642 RPS12P25398 132 aaKnown RBP24■■□□□ 1.43
HDAC11-216ENST00000458642 GNAI1P63096 354 aa24■■□□□ 1.43
HDAC11-216ENST00000458642 KIF4BQ2VIQ3 1234 aa24■■□□□ 1.43
HDAC11-216ENST00000458642 FAM161AQ3B820 660 aa24■■□□□ 1.43
HDAC11-216ENST00000458642 TSPYL6Q8N831 410 aa24■■□□□ 1.43
HDAC11-216ENST00000458642 ZC3H12CQ9C0D7 883 aaKnown RBP24■■□□□ 1.43
HDAC11-216ENST00000458642 ANKIB1Q9P2G1 1089 aa24■■□□□ 1.43
HDAC11-216ENST00000458642 PCCAP05165 728 aaPredicted RBP23.99■■□□□ 1.43
HDAC11-216ENST00000458642 VIL1P09327 827 aaKnown RBP23.99■■□□□ 1.43
HDAC11-216ENST00000458642 CCDC191Q8NCU4 936 aa23.99■■□□□ 1.43
HDAC11-216ENST00000458642 FAM155AB1AL88 458 aaPredicted RBP23.98■■□□□ 1.43
HDAC11-216ENST00000458642 GBA2Q9HCG7 927 aaPredicted RBP23.98■■□□□ 1.43
HDAC11-216ENST00000458642 CWC25Q9NXE8 425 aaPredicted RBP23.98■■□□□ 1.43
HDAC11-216ENST00000458642 GGA3Q9NZ52 723 aa23.98■■□□□ 1.43
HDAC11-216ENST00000458642 GGA1Q9UJY5 639 aa23.98■■□□□ 1.43
HDAC11-216ENST00000458642 PDE8AO60658 829 aa23.97■■□□□ 1.43
HDAC11-216ENST00000458642 NOGQ13253 232 aa23.97■■□□□ 1.43
HDAC11-216ENST00000458642 CCDC152Q4G0S7 254 aa23.97■■□□□ 1.43
HDAC11-216ENST00000458642 DCPSQ96C86 337 aaKnown RBP23.97■■□□□ 1.43
HDAC11-216ENST00000458642 METTL22Q9BUU2 404 aaPredicted RBP23.97■■□□□ 1.43
HDAC11-216ENST00000458642 SPEF2Q9C093 1822 aa23.96■■□□□ 1.43
HDAC11-216ENST00000458642 MCOLN1Q9GZU1 580 aa23.96■■□□□ 1.43
HDAC11-216ENST00000458642 MAP3K2Q9Y2U5 619 aa23.96■■□□□ 1.43
HDAC11-216ENST00000458642 PSME4Q14997 1843 aa23.96■■□□□ 1.43
HDAC11-216ENST00000458642 CA12O43570 354 aa23.95■■□□□ 1.42
HDAC11-216ENST00000458642 RGMBQ6NW40 437 aa23.95■■□□□ 1.42
HDAC11-216ENST00000458642 TSR2Q969E8 191 aaKnown RBP23.95■■□□□ 1.42
HDAC11-216ENST00000458642 G3V3G9 751 aa23.94■■□□□ 1.42
HDAC11-216ENST00000458642 IGKV5-2P06315 115 aa23.94■■□□□ 1.42
HDAC11-216ENST00000458642 CCDC184Q52MB2 194 aa23.94■■□□□ 1.42
HDAC11-216ENST00000458642 DCAF8Q5TAQ9 597 aa23.94■■□□□ 1.42
HDAC11-216ENST00000458642 SCAF8Q9UPN6 1271 aaKnown RBP23.94■■□□□ 1.42
HDAC11-216ENST00000458642 CALD1Q05682 793 aaKnown RBP23.93■■□□□ 1.42
HDAC11-216ENST00000458642 RSBN1LQ6PCB5 846 aaPredicted RBP23.93■■□□□ 1.42
HDAC11-216ENST00000458642 C2orf69Q8N8R5 385 aa23.93■■□□□ 1.42
HDAC11-216ENST00000458642 XDHP47989 1333 aa23.92■■□□□ 1.42
HDAC11-216ENST00000458642 CTSWP56202 376 aa23.92■■□□□ 1.42
HDAC11-216ENST00000458642 ZNF280AP59817 542 aaPredicted RBP23.92■■□□□ 1.42
HDAC11-216ENST00000458642 KIF23Q02241 960 aaPredicted RBP23.92■■□□□ 1.42
HDAC11-216ENST00000458642 ANGEL2Q5VTE6 544 aaKnown RBP23.92■■□□□ 1.42
HDAC11-216ENST00000458642 CCDC30Q5VVM6 783 aa23.92■■□□□ 1.42
HDAC11-216ENST00000458642 ANKRD18AQ8IVF6 992 aa23.92■■□□□ 1.42
HDAC11-216ENST00000458642 SULF1Q8IWU6 871 aa23.92■■□□□ 1.42
HDAC11-216ENST00000458642 CDCA5Q96FF9 252 aa23.92■■□□□ 1.42
HDAC11-216ENST00000458642 PI4KAP2A4QPH2 592 aa23.91■■□□□ 1.42
HDAC11-216ENST00000458642 ZNF157P51786 506 aaPredicted RBP23.91■■□□□ 1.42
HDAC11-216ENST00000458642 SCARF1Q14162 830 aa23.91■■□□□ 1.42
HDAC11-216ENST00000458642 CWF19L2Q2TBE0 894 aaKnown RBP23.91■■□□□ 1.42
HDAC11-216ENST00000458642 PI4KAP1Q8N8J0 262 aa23.91■■□□□ 1.42
HDAC11-216ENST00000458642 GMLQ99445 158 aa23.91■■□□□ 1.42
HDAC11-216ENST00000458642 MXD3Q9BW11 206 aa23.91■■□□□ 1.42
HDAC11-216ENST00000458642 ZNF609O15014 1411 aa23.91■■□□□ 1.42
HDAC11-216ENST00000458642 ZNF646O15015 1829 aaPredicted RBP23.91■■□□□ 1.42
HDAC11-216ENST00000458642 DDX58O95786 925 aaKnown RBP23.9■■□□□ 1.42
HDAC11-216ENST00000458642 HSP90B1P14625 803 aaKnown RBP23.9■■□□□ 1.42
HDAC11-216ENST00000458642 DGKZQ13574 1117 aa23.9■■□□□ 1.42
HDAC11-216ENST00000458642 G2E3Q7L622 706 aa23.9■■□□□ 1.42
HDAC11-216ENST00000458642 TTLL11Q8NHH1 800 aa23.9■■□□□ 1.42
HDAC11-216ENST00000458642 GREM2Q9H772 168 aa23.9■■□□□ 1.42
HDAC11-216ENST00000458642 KSR2Q6VAB6 950 aa23.89■■□□□ 1.41
HDAC11-216ENST00000458642 AGBL3Q8NEM8 1001 aa23.89■■□□□ 1.41
HDAC11-216ENST00000458642 MYH3P11055 1940 aa23.88■■□□□ 1.41
HDAC11-216ENST00000458642 MYOZ2Q9NPC6 264 aa23.88■■□□□ 1.41
HDAC11-216ENST00000458642 SLC10A3P09131 477 aa23.87■■□□□ 1.41
HDAC11-216ENST00000458642 USP17L8P0C7I0 530 aa23.87■■□□□ 1.41
HDAC11-216ENST00000458642 ATP2B4P23634 1241 aa23.87■■□□□ 1.41
HDAC11-216ENST00000458642 MOB2Q70IA6 237 aa23.87■■□□□ 1.41
HDAC11-216ENST00000458642 CCDC102AQ96A19 550 aa23.87■■□□□ 1.41
HDAC11-216ENST00000458642 MINPP1Q9UNW1 487 aa23.87■■□□□ 1.41
HDAC11-216ENST00000458642 USP17L3A6NCW0 530 aa23.86■■□□□ 1.41
HDAC11-216ENST00000458642 USP17L4A6NCW7 530 aa23.86■■□□□ 1.41
HDAC11-216ENST00000458642 TRPA1O75762 1119 aa23.86■■□□□ 1.41
HDAC11-216ENST00000458642 PRAMEF18Q5VWM3 479 aa23.86■■□□□ 1.41
HDAC11-216ENST00000458642 USP17L1Q7RTZ2 530 aa23.86■■□□□ 1.41
HDAC11-216ENST00000458642 TXNRD3Q86VQ6 643 aa23.86■■□□□ 1.41
HDAC11-216ENST00000458642 RNF186Q9NXI6 227 aa23.86■■□□□ 1.41
HDAC11-216ENST00000458642 NEURL1BA8MQ27 555 aa23.85■■□□□ 1.41
HDAC11-216ENST00000458642 RGS19P49795 217 aa23.85■■□□□ 1.41
HDAC11-216ENST00000458642 MLLT1Q03111 559 aaPredicted RBP23.85■■□□□ 1.41
HDAC11-216ENST00000458642 CSRNP1Q96S65 589 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms