RNA–Protein interactions for RNA: ENST00000458516.5

TRIM39-211, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-211ENST00000458516 ERICH6BQ5W0A0 696 aa20.91■□□□□ 0.94
TRIM39-211ENST00000458516 ATG9AQ7Z3C6 839 aa20.91■□□□□ 0.94
TRIM39-211ENST00000458516 SP8Q8IXZ3 490 aa20.91■□□□□ 0.94
TRIM39-211ENST00000458516 DUOX1Q9NRD9 1551 aa20.91■□□□□ 0.94
TRIM39-211ENST00000458516 CNNM1Q9NRU3 951 aa20.91■□□□□ 0.94
TRIM39-211ENST00000458516 ZNF219Q9P2Y4 722 aaPredicted RBP20.91■□□□□ 0.94
TRIM39-211ENST00000458516 MINPP1Q9UNW1 487 aa20.91■□□□□ 0.94
TRIM39-211ENST00000458516 BCS1LQ9Y276 419 aa20.91■□□□□ 0.94
TRIM39-211ENST00000458516 RIPOR2Q9Y4F9 1068 aa20.91■□□□□ 0.94
TRIM39-211ENST00000458516 C21orf2O43822 256 aa20.9■□□□□ 0.94
TRIM39-211ENST00000458516 SURF6O75683 361 aaKnown RBP20.9■□□□□ 0.94
TRIM39-211ENST00000458516 EXOC6BQ9Y2D4 811 aa20.9■□□□□ 0.94
TRIM39-211ENST00000458516 SRCAPQ6ZRS2 3230 aa20.89■□□□□ 0.94
TRIM39-211ENST00000458516 CHRNDQ07001 517 aa20.89■□□□□ 0.93
TRIM39-211ENST00000458516 ARAP2Q8WZ64 1704 aa20.88■□□□□ 0.93
TRIM39-211ENST00000458516 IGHDP01880 384 aa20.88■□□□□ 0.93
TRIM39-211ENST00000458516 IL15P40933 162 aaPredicted RBP20.88■□□□□ 0.93
TRIM39-211ENST00000458516 G3BP1Q13283 466 aaKnown RBP eCLIP20.88■□□□□ 0.93
TRIM39-211ENST00000458516 DCTPP1Q9H773 170 aa20.88■□□□□ 0.93
TRIM39-211ENST00000458516 MROH5Q6ZUA9 1318 aa20.87■□□□□ 0.93
TRIM39-211ENST00000458516 GPSM2P81274 684 aa20.87■□□□□ 0.93
TRIM39-211ENST00000458516 CCDC93Q567U6 631 aa20.87■□□□□ 0.93
TRIM39-211ENST00000458516 CC2D2BQ6DHV5 1058 aa20.87■□□□□ 0.93
TRIM39-211ENST00000458516 VGLL2Q8N8G2 317 aa20.87■□□□□ 0.93
TRIM39-211ENST00000458516 RWDD1Q9H446 243 aaPredicted RBP20.87■□□□□ 0.93
TRIM39-211ENST00000458516 CCDC88AQ3V6T2 1871 aa20.86■□□□□ 0.93
TRIM39-211ENST00000458516 SASH1O94885 1247 aa20.86■□□□□ 0.93
TRIM39-211ENST00000458516 YBX3P16989 372 aaKnown RBP eCLIP20.86■□□□□ 0.93
TRIM39-211ENST00000458516 METTL24Q5JXM2 366 aa20.86■□□□□ 0.93
TRIM39-211ENST00000458516 SOGA3Q5TF21 947 aa20.86■□□□□ 0.93
TRIM39-211ENST00000458516 HELBQ8NG08 1087 aaPredicted RBP20.86■□□□□ 0.93
TRIM39-211ENST00000458516 PODXL2Q9NZ53 605 aa20.86■□□□□ 0.93
TRIM39-211ENST00000458516 XDHP47989 1333 aa20.85■□□□□ 0.93
TRIM39-211ENST00000458516 OS9Q13438 667 aaPredicted RBP20.85■□□□□ 0.93
TRIM39-211ENST00000458516 HSP90AB4PQ58FF6 505 aa20.85■□□□□ 0.93
TRIM39-211ENST00000458516 ANKRD2Q9GZV1 360 aa20.85■□□□□ 0.93
TRIM39-211ENST00000458516 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.85■□□□□ 0.93
TRIM39-211ENST00000458516 SBF1O95248 1867 aa20.84■□□□□ 0.93
TRIM39-211ENST00000458516 TAF5LO75529 589 aa20.84■□□□□ 0.93
TRIM39-211ENST00000458516 PELP1Q8IZL8 1130 aaKnown RBP20.84■□□□□ 0.93
TRIM39-211ENST00000458516 MPNDQ8N594 471 aa20.84■□□□□ 0.93
TRIM39-211ENST00000458516 TMX4Q9H1E5 349 aaPredicted RBP20.84■□□□□ 0.93
TRIM39-211ENST00000458516 RAB11FIP3O75154 756 aa20.83■□□□□ 0.93
TRIM39-211ENST00000458516 PDE8BO95263 885 aa20.83■□□□□ 0.93
TRIM39-211ENST00000458516 TFCP2Q12800 502 aa20.83■□□□□ 0.93
TRIM39-211ENST00000458516 ERC1Q8IUD2 1116 aa20.83■□□□□ 0.93
TRIM39-211ENST00000458516 ANKIB1Q9P2G1 1089 aa20.83■□□□□ 0.93
TRIM39-211ENST00000458516 CEP126Q9P2H0 1117 aa20.83■□□□□ 0.93
TRIM39-211ENST00000458516 NSFL1CQ9UNZ2 370 aaKnown RBP20.83■□□□□ 0.93
TRIM39-211ENST00000458516 ZNF609O15014 1411 aa20.83■□□□□ 0.93
TRIM39-211ENST00000458516 APBB1O00213 710 aa20.82■□□□□ 0.92
TRIM39-211ENST00000458516 GRIPAP1Q4V328 841 aa20.82■□□□□ 0.92
TRIM39-211ENST00000458516 DPP8Q6V1X1 898 aaPredicted RBP20.82■□□□□ 0.92
TRIM39-211ENST00000458516 SMC5Q8IY18 1101 aa20.82■□□□□ 0.92
TRIM39-211ENST00000458516 RTKN2Q8IZC4 609 aa20.82■□□□□ 0.92
TRIM39-211ENST00000458516 RHPN1Q8TCX5 695 aa20.82■□□□□ 0.92
TRIM39-211ENST00000458516 GCC1Q96CN9 775 aa20.82■□□□□ 0.92
TRIM39-211ENST00000458516 PPP4R2Q9NY27 417 aa20.82■□□□□ 0.92
TRIM39-211ENST00000458516 DICER1Q9UPY3 1922 aaKnown RBP20.81■□□□□ 0.92
TRIM39-211ENST00000458516 WTIPA6NIX2 430 aaPredicted RBP20.81■□□□□ 0.92
TRIM39-211ENST00000458516 SNAP23O00161 211 aa20.81■□□□□ 0.92
TRIM39-211ENST00000458516 UFL1O94874 794 aa20.81■□□□□ 0.92
TRIM39-211ENST00000458516 ATP2B4P23634 1241 aa20.81■□□□□ 0.92
TRIM39-211ENST00000458516 TBC1D16Q8TBP0 767 aa20.81■□□□□ 0.92
TRIM39-211ENST00000458516 KIF1BPQ96EK5 621 aa20.81■□□□□ 0.92
TRIM39-211ENST00000458516 RTFDC1Q9BY42 306 aaPredicted RBP20.81■□□□□ 0.92
TRIM39-211ENST00000458516 POLLQ9UGP5 575 aa20.81■□□□□ 0.92
TRIM39-211ENST00000458516 GGA1Q9UJY5 639 aa20.81■□□□□ 0.92
TRIM39-211ENST00000458516 KDM2BQ8NHM5 1336 aa20.8■□□□□ 0.92
TRIM39-211ENST00000458516 NFKBIEO00221 500 aa20.8■□□□□ 0.92
TRIM39-211ENST00000458516 FGFR2P21802 821 aa20.8■□□□□ 0.92
TRIM39-211ENST00000458516 FKBP4Q02790 459 aaKnown RBP eCLIP20.8■□□□□ 0.92
TRIM39-211ENST00000458516 PSMD1Q99460 953 aa20.8■□□□□ 0.92
TRIM39-211ENST00000458516 LEMD3Q9Y2U8 911 aa20.8■□□□□ 0.92
TRIM39-211ENST00000458516 ZNF804BA4D1E1 1349 aa20.79■□□□□ 0.92
TRIM39-211ENST00000458516 IRS2Q9Y4H2 1338 aa20.79■□□□□ 0.92
TRIM39-211ENST00000458516 GOLGB1Q14789 3259 aaKnown RBP20.79■□□□□ 0.92
TRIM39-211ENST00000458516 UBE4AQ14139 1066 aa20.79■□□□□ 0.92
TRIM39-211ENST00000458516 PUM3Q15397 648 aaKnown RBP20.79■□□□□ 0.92
TRIM39-211ENST00000458516 GPR162Q16538 588 aa20.79■□□□□ 0.92
TRIM39-211ENST00000458516 CCDC136Q96JN2 1154 aa20.79■□□□□ 0.92
TRIM39-211ENST00000458516 GPR101Q96P66 508 aaPredicted RBP20.79■□□□□ 0.92
TRIM39-211ENST00000458516 GPR108Q9NPR9 543 aa20.79■□□□□ 0.92
TRIM39-211ENST00000458516 LTBP3Q9NS15 1303 aa20.78■□□□□ 0.92
TRIM39-211ENST00000458516 RASSF7Q02833 373 aa20.78■□□□□ 0.92
TRIM39-211ENST00000458516 ATP2B3Q16720 1220 aa20.78■□□□□ 0.92
TRIM39-211ENST00000458516 B4GALNT3Q6L9W6 998 aa20.78■□□□□ 0.92
TRIM39-211ENST00000458516 LRRCC1Q9C099 1032 aa20.78■□□□□ 0.92
TRIM39-211ENST00000458516 TAOK3Q9H2K8 898 aa20.78■□□□□ 0.92
TRIM39-211ENST00000458516 IL1RAPL2Q9NP60 686 aa20.78■□□□□ 0.92
TRIM39-211ENST00000458516 MYH13Q9UKX3 1938 aa20.78■□□□□ 0.92
TRIM39-211ENST00000458516 MED23Q9ULK4 1368 aa20.77■□□□□ 0.92
TRIM39-211ENST00000458516 C6orf229H3BNL8 230 aa20.77■□□□□ 0.92
TRIM39-211ENST00000458516 SMARCA5O60264 1052 aaPredicted RBP20.77■□□□□ 0.92
TRIM39-211ENST00000458516 KLRK1P26718 216 aa20.77■□□□□ 0.92
TRIM39-211ENST00000458516 KCNJ4P48050 445 aa20.77■□□□□ 0.92
TRIM39-211ENST00000458516 TNNI3KQ59H18 835 aa20.77■□□□□ 0.92
TRIM39-211ENST00000458516 SUPT20HQ8NEM7 779 aa20.77■□□□□ 0.92
TRIM39-211ENST00000458516 AKAP2Q9Y2D5 859 aa20.77■□□□□ 0.92
TRIM39-211ENST00000458516 FPGT-TNNI3KV9GXZ4 949 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms