RNA–Protein interactions for RNA: ENST00000456312.5

SBDSP1-205, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 5

Gene SBDSP1, Length 963 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-205ENST00000456312 RTKN2Q8IZC4 609 aa23.32■■□□□ 1.32
SBDSP1-205ENST00000456312 PODXL2Q9NZ53 605 aa23.32■■□□□ 1.32
SBDSP1-205ENST00000456312 MINPP1Q9UNW1 487 aa23.32■■□□□ 1.32
SBDSP1-205ENST00000456312 GPSM2P81274 684 aa23.31■■□□□ 1.32
SBDSP1-205ENST00000456312 FKBP4Q02790 459 aaKnown RBP eCLIP23.31■■□□□ 1.32
SBDSP1-205ENST00000456312 POLA2Q14181 598 aa23.31■■□□□ 1.32
SBDSP1-205ENST00000456312 CEP85Q6P2H3 762 aa23.31■■□□□ 1.32
SBDSP1-205ENST00000456312 ARHGAP27Q6ZUM4 889 aa23.31■■□□□ 1.32
SBDSP1-205ENST00000456312 KLHDC4Q8TBB5 520 aa23.31■■□□□ 1.32
SBDSP1-205ENST00000456312 ARAP2Q8WZ64 1704 aa23.3■■□□□ 1.32
SBDSP1-205ENST00000456312 CRBNQ96SW2 442 aa23.3■■□□□ 1.32
SBDSP1-205ENST00000456312 PUS3Q9BZE2 481 aaKnown RBP23.3■■□□□ 1.32
SBDSP1-205ENST00000456312 TAOK3Q9H2K8 898 aa23.3■■□□□ 1.32
SBDSP1-205ENST00000456312 COPRSQ9NQ92 184 aa23.3■■□□□ 1.32
SBDSP1-205ENST00000456312 RIPOR2Q9Y4F9 1068 aa23.3■■□□□ 1.32
SBDSP1-205ENST00000456312 SCN9AQ15858 1988 aa23.29■■□□□ 1.32
SBDSP1-205ENST00000456312 ATP8B2P98198 1209 aa23.29■■□□□ 1.32
SBDSP1-205ENST00000456312 SSH3Q8TE77 659 aa23.29■■□□□ 1.32
SBDSP1-205ENST00000456312 SRGAP3O43295 1099 aa23.28■■□□□ 1.32
SBDSP1-205ENST00000456312 MPNDQ8N594 471 aa23.28■■□□□ 1.32
SBDSP1-205ENST00000456312 MPHOSPH8Q99549 860 aa23.28■■□□□ 1.32
SBDSP1-205ENST00000456312 CHMP4BQ9H444 224 aaKnown RBP23.28■■□□□ 1.32
SBDSP1-205ENST00000456312 DCAF8L1A6NGE4 600 aa23.27■■□□□ 1.32
SBDSP1-205ENST00000456312 LRRC24Q50LG9 513 aa23.27■■□□□ 1.32
SBDSP1-205ENST00000456312 LDHAL6AQ6ZMR3 332 aa23.27■■□□□ 1.32
SBDSP1-205ENST00000456312 ATG9AQ7Z3C6 839 aa23.27■■□□□ 1.32
SBDSP1-205ENST00000456312 SIRT2Q8IXJ6 389 aa23.27■■□□□ 1.32
SBDSP1-205ENST00000456312 VGLL2Q8N8G2 317 aa23.27■■□□□ 1.32
SBDSP1-205ENST00000456312 POLLQ9UGP5 575 aa23.27■■□□□ 1.32
SBDSP1-205ENST00000456312 FBXO3Q9UK99 471 aa23.27■■□□□ 1.32
SBDSP1-205ENST00000456312 XDHP47989 1333 aa23.27■■□□□ 1.32
SBDSP1-205ENST00000456312 IRS2Q9Y4H2 1338 aa23.27■■□□□ 1.32
SBDSP1-205ENST00000456312 CHRNDQ07001 517 aa23.26■■□□□ 1.31
SBDSP1-205ENST00000456312 PA2G4Q9UQ80 394 aaKnown RBP23.26■■□□□ 1.31
SBDSP1-205ENST00000456312 WTIPA6NIX2 430 aaPredicted RBP23.25■■□□□ 1.31
SBDSP1-205ENST00000456312 EYA2O00167 538 aa23.25■■□□□ 1.31
SBDSP1-205ENST00000456312 DPP8Q6V1X1 898 aaPredicted RBP23.25■■□□□ 1.31
SBDSP1-205ENST00000456312 TBC1D16Q8TBP0 767 aa23.25■■□□□ 1.31
SBDSP1-205ENST00000456312 NSFL1CQ9UNZ2 370 aaKnown RBP23.25■■□□□ 1.31
SBDSP1-205ENST00000456312 CIAO1O76071 339 aa23.24■■□□□ 1.31
SBDSP1-205ENST00000456312 LMNB1P20700 586 aa23.24■■□□□ 1.31
SBDSP1-205ENST00000456312 TAF7LQ5H9L4 462 aa23.24■■□□□ 1.31
SBDSP1-205ENST00000456312 ZNF277Q9NRM2 450 aaPredicted RBP23.24■■□□□ 1.31
SBDSP1-205ENST00000456312 RPAP2Q8IXW5 612 aaPredicted RBP23.23■■□□□ 1.31
SBDSP1-205ENST00000456312 VPS33BQ9H267 617 aa23.23■■□□□ 1.31
SBDSP1-205ENST00000456312 CNNM1Q9NRU3 951 aa23.23■■□□□ 1.31
SBDSP1-205ENST00000456312 MYH13Q9UKX3 1938 aa23.22■■□□□ 1.31
SBDSP1-205ENST00000456312 IARSP41252 1262 aaKnown RBP23.22■■□□□ 1.31
SBDSP1-205ENST00000456312 ANKRD2Q9GZV1 360 aa23.22■■□□□ 1.31
SBDSP1-205ENST00000456312 TMX4Q9H1E5 349 aaPredicted RBP23.22■■□□□ 1.31
SBDSP1-205ENST00000456312 MROH5Q6ZUA9 1318 aa23.22■■□□□ 1.31
SBDSP1-205ENST00000456312 ATP2B4P23634 1241 aa23.21■■□□□ 1.31
SBDSP1-205ENST00000456312 KIAA2012Q0VF49 1180 aa23.21■■□□□ 1.31
SBDSP1-205ENST00000456312 C9orf131Q5VYM1 1079 aa23.21■■□□□ 1.31
SBDSP1-205ENST00000456312 SUPT20HQ8NEM7 779 aa23.21■■□□□ 1.31
SBDSP1-205ENST00000456312 ANKIB1Q9P2G1 1089 aa23.21■■□□□ 1.31
SBDSP1-205ENST00000456312 GGA1Q9UJY5 639 aa23.21■■□□□ 1.31
SBDSP1-205ENST00000456312 LEMD3Q9Y2U8 911 aa23.21■■□□□ 1.31
SBDSP1-205ENST00000456312 NOP58Q9Y2X3 529 aaKnown RBP23.21■■□□□ 1.31
SBDSP1-205ENST00000456312 MED23Q9ULK4 1368 aa23.2■■□□□ 1.3
SBDSP1-205ENST00000456312 SNAP23O00161 211 aa23.2■■□□□ 1.3
SBDSP1-205ENST00000456312 TAF5LO75529 589 aa23.2■■□□□ 1.3
SBDSP1-205ENST00000456312 UFL1O94874 794 aa23.2■■□□□ 1.3
SBDSP1-205ENST00000456312 HELBQ8NG08 1087 aaPredicted RBP23.2■■□□□ 1.3
SBDSP1-205ENST00000456312 GPR101Q96P66 508 aaPredicted RBP23.2■■□□□ 1.3
SBDSP1-205ENST00000456312 PCDHB15Q9Y5E8 787 aa23.2■■□□□ 1.3
SBDSP1-205ENST00000456312 ZNF804BA4D1E1 1349 aa23.19■■□□□ 1.3
SBDSP1-205ENST00000456312 C15orf52Q6ZUT6 534 aaKnown RBP23.19■■□□□ 1.3
SBDSP1-205ENST00000456312 EXOC6Q8TAG9 804 aa23.19■■□□□ 1.3
SBDSP1-205ENST00000456312 SIL1Q9H173 461 aa23.19■■□□□ 1.3
SBDSP1-205ENST00000456312 RNF181Q9P0P0 153 aa23.19■■□□□ 1.3
SBDSP1-205ENST00000456312 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.19■■□□□ 1.3
SBDSP1-205ENST00000456312 ZC3H4Q9UPT8 1303 aaKnown RBP23.18■■□□□ 1.3
SBDSP1-205ENST00000456312 PDE8BO95263 885 aa23.18■■□□□ 1.3
SBDSP1-205ENST00000456312 FGFR2P21802 821 aa23.18■■□□□ 1.3
SBDSP1-205ENST00000456312 KLRK1P26718 216 aa23.18■■□□□ 1.3
SBDSP1-205ENST00000456312 IL15P40933 162 aaPredicted RBP23.18■■□□□ 1.3
SBDSP1-205ENST00000456312 AOC3Q16853 763 aa23.18■■□□□ 1.3
SBDSP1-205ENST00000456312 AAMPQ13685 434 aa23.17■■□□□ 1.3
SBDSP1-205ENST00000456312 TXNRD3Q86VQ6 643 aa23.17■■□□□ 1.3
SBDSP1-205ENST00000456312 C6orf229H3BNL8 230 aa23.16■■□□□ 1.3
SBDSP1-205ENST00000456312 PPIP5K2O43314 1243 aa23.16■■□□□ 1.3
SBDSP1-205ENST00000456312 SASH1O94885 1247 aa23.16■■□□□ 1.3
SBDSP1-205ENST00000456312 UBE4AQ14139 1066 aa23.16■■□□□ 1.3
SBDSP1-205ENST00000456312 WASHC4Q2M389 1173 aa23.16■■□□□ 1.3
SBDSP1-205ENST00000456312 METTL24Q5JXM2 366 aa23.16■■□□□ 1.3
SBDSP1-205ENST00000456312 FZD9O00144 591 aa23.15■■□□□ 1.3
SBDSP1-205ENST00000456312 EYA3Q99504 573 aa23.15■■□□□ 1.3
SBDSP1-205ENST00000456312 WDR90Q96KV7 1748 aa23.14■■□□□ 1.3
SBDSP1-205ENST00000456312 LARGE2Q8N3Y3 721 aa23.14■■□□□ 1.29
SBDSP1-205ENST00000456312 ZNF609O15014 1411 aa23.14■■□□□ 1.29
SBDSP1-205ENST00000456312 YDJCA8MPS7 323 aa23.13■■□□□ 1.29
SBDSP1-205ENST00000456312 IRX6P78412 446 aaPredicted RBP23.13■■□□□ 1.29
SBDSP1-205ENST00000456312 AKAP11Q9UKA4 1901 aa23.12■■□□□ 1.29
SBDSP1-205ENST00000456312 SURF6O75683 361 aaKnown RBP23.12■■□□□ 1.29
SBDSP1-205ENST00000456312 CENPBP07199 599 aaPredicted RBP23.12■■□□□ 1.29
SBDSP1-205ENST00000456312 SCN4AP35499 1836 aa23.11■■□□□ 1.29
SBDSP1-205ENST00000456312 RIMBP2O15034 1052 aa23.11■■□□□ 1.29
SBDSP1-205ENST00000456312 HMMRO75330 724 aa23.11■■□□□ 1.29
SBDSP1-205ENST00000456312 TFCP2Q12800 502 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms