RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 SF3B3Q15393 1217 aaKnown RBP30.39■■■□□ 2.46
PTPRA-208ENST00000455631 LMOD3Q0VAK6 560 aa30.38■■■□□ 2.45
PTPRA-208ENST00000455631 CHPF2Q9P2E5 772 aa30.38■■■□□ 2.45
PTPRA-208ENST00000455631 KRT24Q2M2I5 525 aa30.37■■■□□ 2.45
PTPRA-208ENST00000455631 CDCA5Q96FF9 252 aa30.37■■■□□ 2.45
PTPRA-208ENST00000455631 CSRNP1Q96S65 589 aa30.37■■■□□ 2.45
PTPRA-208ENST00000455631 ASTN2O75129 1339 aaPredicted RBP30.37■■■□□ 2.45
PTPRA-208ENST00000455631 RTL5Q5HYW3 569 aaPredicted RBP30.36■■■□□ 2.45
PTPRA-208ENST00000455631 CTU1Q7Z7A3 348 aaKnown RBP30.36■■■□□ 2.45
PTPRA-208ENST00000455631 PLBD2Q8NHP8 589 aa30.36■■■□□ 2.45
PTPRA-208ENST00000455631 TBC1D16Q8TBP0 767 aa30.36■■■□□ 2.45
PTPRA-208ENST00000455631 ATP5J2-PTCD1G3V325 749 aa30.35■■■□□ 2.45
PTPRA-208ENST00000455631 TMPOP42166 694 aaKnown RBP30.34■■■□□ 2.45
PTPRA-208ENST00000455631 ISCA1Q9BUE6 129 aa30.34■■■□□ 2.45
PTPRA-208ENST00000455631 G3V3G9 751 aa30.33■■■□□ 2.45
PTPRA-208ENST00000455631 VIL1P09327 827 aaKnown RBP30.33■■■□□ 2.45
PTPRA-208ENST00000455631 DCAF8Q5TAQ9 597 aa30.33■■■□□ 2.45
PTPRA-208ENST00000455631 ANKRD13DQ6ZTN6 518 aa30.33■■■□□ 2.45
PTPRA-208ENST00000455631 RASAL3Q86YV0 1011 aa30.33■■■□□ 2.45
PTPRA-208ENST00000455631 ZC3H12CQ9C0D7 883 aaKnown RBP30.33■■■□□ 2.45
PTPRA-208ENST00000455631 HDGFL1Q5TGJ6 251 aa30.32■■■□□ 2.44
PTPRA-208ENST00000455631 PAPPA2Q9BXP8 1791 aa30.31■■■□□ 2.44
PTPRA-208ENST00000455631 RPS8P62241 208 aaKnown RBP30.31■■■□□ 2.44
PTPRA-208ENST00000455631 ANGEL2Q5VTE6 544 aaKnown RBP30.31■■■□□ 2.44
PTPRA-208ENST00000455631 LAS1LQ9Y4W2 734 aaKnown RBP30.31■■■□□ 2.44
PTPRA-208ENST00000455631 IRS4O14654 1257 aaPredicted RBP30.3■■■□□ 2.44
PTPRA-208ENST00000455631 UFL1O94874 794 aa30.3■■■□□ 2.44
PTPRA-208ENST00000455631 PRPF38BQ5VTL8 546 aaKnown RBP30.3■■■□□ 2.44
PTPRA-208ENST00000455631 REM2Q8IYK8 340 aaPredicted RBP30.3■■■□□ 2.44
PTPRA-208ENST00000455631 ANKIB1Q9P2G1 1089 aa30.29■■■□□ 2.44
PTPRA-208ENST00000455631 SCARF1Q14162 830 aa30.28■■■□□ 2.44
PTPRA-208ENST00000455631 NEUROD2Q15784 382 aa30.28■■■□□ 2.44
PTPRA-208ENST00000455631 PSME4Q14997 1843 aa30.28■■■□□ 2.44
PTPRA-208ENST00000455631 CHL1O00533 1208 aa30.27■■■□□ 2.44
PTPRA-208ENST00000455631 ZNF280AP59817 542 aaPredicted RBP30.27■■■□□ 2.44
PTPRA-208ENST00000455631 PODXL2Q9NZ53 605 aa30.27■■■□□ 2.44
PTPRA-208ENST00000455631 DBF4Q9UBU7 674 aaPredicted RBP30.27■■■□□ 2.44
PTPRA-208ENST00000455631 HPS5Q9UPZ3 1129 aa30.27■■■□□ 2.44
PTPRA-208ENST00000455631 ZNF609O15014 1411 aa30.26■■■□□ 2.43
PTPRA-208ENST00000455631 FKBP1BP68106 108 aa30.26■■■□□ 2.43
PTPRA-208ENST00000455631 RSBN1LQ6PCB5 846 aaPredicted RBP30.26■■■□□ 2.43
PTPRA-208ENST00000455631 GGA1Q9UJY5 639 aa30.26■■■□□ 2.43
PTPRA-208ENST00000455631 AGBL3Q8NEM8 1001 aa30.25■■■□□ 2.43
PTPRA-208ENST00000455631 SEC31BQ9NQW1 1179 aa30.25■■■□□ 2.43
PTPRA-208ENST00000455631 HDAC9Q9UKV0 1011 aa30.25■■■□□ 2.43
PTPRA-208ENST00000455631 HOXB7P09629 217 aa30.23■■■□□ 2.43
PTPRA-208ENST00000455631 MOB2Q70IA6 237 aa30.22■■■□□ 2.43
PTPRA-208ENST00000455631 CCDC146Q8IYE0 955 aa30.22■■■□□ 2.43
PTPRA-208ENST00000455631 MYOZ2Q9NPC6 264 aa30.22■■■□□ 2.43
PTPRA-208ENST00000455631 HYPKQ9NX55 129 aa30.22■■■□□ 2.43
PTPRA-208ENST00000455631 SCAF8Q9UPN6 1271 aaKnown RBP30.22■■■□□ 2.43
PTPRA-208ENST00000455631 USP17L8P0C7I0 530 aa30.21■■■□□ 2.43
PTPRA-208ENST00000455631 TRIM28Q13263 835 aaKnown RBP30.21■■■□□ 2.43
PTPRA-208ENST00000455631 PKN2Q16513 984 aaKnown RBP30.21■■■□□ 2.43
PTPRA-208ENST00000455631 PITPNM2Q9BZ72 1349 aa30.21■■■□□ 2.43
PTPRA-208ENST00000455631 TBC1D8O95759 1140 aa30.2■■■□□ 2.43
PTPRA-208ENST00000455631 ZBTB38Q8NAP3 1195 aaPredicted RBP30.2■■■□□ 2.43
PTPRA-208ENST00000455631 ZNF296Q8WUU4 475 aaPredicted RBP30.2■■■□□ 2.43
PTPRA-208ENST00000455631 HSP90B1P14625 803 aaKnown RBP30.18■■■□□ 2.42
PTPRA-208ENST00000455631 CCDC152Q4G0S7 254 aa30.18■■■□□ 2.42
PTPRA-208ENST00000455631 RIC3Q7Z5B4 369 aa30.18■■■□□ 2.42
PTPRA-208ENST00000455631 UBE2Q2LH0YL09 131 aa30.17■■■□□ 2.42
PTPRA-208ENST00000455631 TTLL12Q14166 644 aaPredicted RBP30.17■■■□□ 2.42
PTPRA-208ENST00000455631 CCDC85AQ96PX6 553 aaPredicted RBP30.17■■■□□ 2.42
PTPRA-208ENST00000455631 GMLQ99445 158 aa30.17■■■□□ 2.42
PTPRA-208ENST00000455631 TRIM35Q9UPQ4 493 aa30.17■■■□□ 2.42
PTPRA-208ENST00000455631 GOLGA2Q08379 1002 aa30.16■■■□□ 2.42
PTPRA-208ENST00000455631 PRAMEF18Q5VWM3 479 aa30.16■■■□□ 2.42
PTPRA-208ENST00000455631 DUSP27Q5VZP5 1158 aa30.16■■■□□ 2.42
PTPRA-208ENST00000455631 XDHP47989 1333 aa30.16■■■□□ 2.42
PTPRA-208ENST00000455631 USP17L3A6NCW0 530 aa30.15■■■□□ 2.42
PTPRA-208ENST00000455631 USP17L4A6NCW7 530 aa30.15■■■□□ 2.42
PTPRA-208ENST00000455631 USP17L1Q7RTZ2 530 aa30.15■■■□□ 2.42
PTPRA-208ENST00000455631 MYD88Q99836 296 aa30.14■■■□□ 2.42
PTPRA-208ENST00000455631 MKRN3Q13064 507 aaKnown RBP30.13■■■□□ 2.41
PTPRA-208ENST00000455631 ANKRD18AQ8IVF6 992 aa30.13■■■□□ 2.41
PTPRA-208ENST00000455631 GPR25O00155 361 aa30.12■■■□□ 2.41
PTPRA-208ENST00000455631 PDE8AO60658 829 aa30.12■■■□□ 2.41
PTPRA-208ENST00000455631 ATP2B4P23634 1241 aa30.12■■■□□ 2.41
PTPRA-208ENST00000455631 PODNQ7Z5L7 613 aa30.12■■■□□ 2.41
PTPRA-208ENST00000455631 NBPF9Q3BBW0 867 aa30.11■■■□□ 2.41
PTPRA-208ENST00000455631 JARID2Q92833 1246 aaPredicted RBP30.11■■■□□ 2.41
PTPRA-208ENST00000455631 PCCAP05165 728 aaPredicted RBP30.1■■■□□ 2.41
PTPRA-208ENST00000455631 NF2P35240 595 aa30.1■■■□□ 2.41
PTPRA-208ENST00000455631 RALBP1Q15311 655 aa30.1■■■□□ 2.41
PTPRA-208ENST00000455631 FBXO46Q6PJ61 603 aaPredicted RBP30.1■■■□□ 2.41
PTPRA-208ENST00000455631 RUNDC1Q96C34 613 aa30.1■■■□□ 2.41
PTPRA-208ENST00000455631 PHAXQ9H814 394 aaKnown RBP30.1■■■□□ 2.41
PTPRA-208ENST00000455631 SPEF2Q9C093 1822 aa30.1■■■□□ 2.41
PTPRA-208ENST00000455631 TM4SF4P48230 202 aa30.09■■■□□ 2.41
PTPRA-208ENST00000455631 CCDC191Q8NCU4 936 aa30.09■■■□□ 2.41
PTPRA-208ENST00000455631 FBXW7Q969H0 707 aa30.08■■■□□ 2.41
PTPRA-208ENST00000455631 MBIPQ9NS73 344 aa30.08■■■□□ 2.41
PTPRA-208ENST00000455631 CWC25Q9NXE8 425 aaPredicted RBP30.08■■■□□ 2.41
PTPRA-208ENST00000455631 ZNF646O15015 1829 aaPredicted RBP30.08■■■□□ 2.41
PTPRA-208ENST00000455631 SREBF2Q12772 1141 aa30.07■■■□□ 2.4
PTPRA-208ENST00000455631 NOM1Q5C9Z4 860 aaKnown RBP30.07■■■□□ 2.4
PTPRA-208ENST00000455631 OGFOD1Q8N543 542 aa30.07■■■□□ 2.4
PTPRA-208ENST00000455631 MXD3Q9BW11 206 aa30.07■■■□□ 2.4
PTPRA-208ENST00000455631 MED23Q9ULK4 1368 aa30.06■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms