RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 LRRC37AA6NMS7 1700 aa20.51■□□□□ 0.87
CCDC90B-202ENST00000455220 DPEP1P16444 411 aa20.51■□□□□ 0.87
CCDC90B-202ENST00000455220 KCNA3P22001 575 aa20.51■□□□□ 0.87
CCDC90B-202ENST00000455220 TMC4Q7Z404 712 aa20.51■□□□□ 0.87
CCDC90B-202ENST00000455220 CNKSR1Q969H4 720 aa20.51■□□□□ 0.87
CCDC90B-202ENST00000455220 ZNF622Q969S3 477 aaKnown RBP eCLIP20.51■□□□□ 0.87
CCDC90B-202ENST00000455220 MROH5Q6ZUA9 1318 aa20.5■□□□□ 0.87
CCDC90B-202ENST00000455220 ANKRD45Q5TZF3 282 aa20.5■□□□□ 0.87
CCDC90B-202ENST00000455220 VGLL2Q8N8G2 317 aa20.5■□□□□ 0.87
CCDC90B-202ENST00000455220 BRCA1P38398 1863 aaKnown RBP20.49■□□□□ 0.87
CCDC90B-202ENST00000455220 APBB1O00213 710 aa20.49■□□□□ 0.87
CCDC90B-202ENST00000455220 CACNA1SQ13698 1873 aa20.48■□□□□ 0.87
CCDC90B-202ENST00000455220 A0A0G2JLW4 131 aa20.48■□□□□ 0.87
CCDC90B-202ENST00000455220 TFCP2Q12800 502 aa20.48■□□□□ 0.87
CCDC90B-202ENST00000455220 CHD1LQ86WJ1 897 aa20.48■□□□□ 0.87
CCDC90B-202ENST00000455220 MINPP1Q9UNW1 487 aa20.48■□□□□ 0.87
CCDC90B-202ENST00000455220 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.48■□□□□ 0.87
CCDC90B-202ENST00000455220 SLX4Q8IY92 1834 aa20.48■□□□□ 0.87
CCDC90B-202ENST00000455220 PPEF1O14829 653 aaPredicted RBP20.47■□□□□ 0.87
CCDC90B-202ENST00000455220 CHRNDQ07001 517 aa20.47■□□□□ 0.87
CCDC90B-202ENST00000455220 METTL24Q5JXM2 366 aa20.47■□□□□ 0.87
CCDC90B-202ENST00000455220 GPR108Q9NPR9 543 aa20.47■□□□□ 0.87
CCDC90B-202ENST00000455220 CEP126Q9P2H0 1117 aa20.47■□□□□ 0.87
CCDC90B-202ENST00000455220 PPP1R1BQ9UD71 204 aaPredicted RBP20.47■□□□□ 0.87
CCDC90B-202ENST00000455220 SMARCA5O60264 1052 aaPredicted RBP20.46■□□□□ 0.87
CCDC90B-202ENST00000455220 PRPF40BQ6NWY9 871 aaKnown RBP20.46■□□□□ 0.87
CCDC90B-202ENST00000455220 ATP6V0A2Q9Y487 856 aa20.46■□□□□ 0.87
CCDC90B-202ENST00000455220 PDE8BO95263 885 aa20.46■□□□□ 0.87
CCDC90B-202ENST00000455220 SP8Q8IXZ3 490 aa20.46■□□□□ 0.87
CCDC90B-202ENST00000455220 TTLL6Q8N841 843 aa20.46■□□□□ 0.87
CCDC90B-202ENST00000455220 IL1RAPL2Q9NP60 686 aa20.46■□□□□ 0.87
CCDC90B-202ENST00000455220 KLHL34Q8N239 644 aa20.45■□□□□ 0.86
CCDC90B-202ENST00000455220 CLASRPQ8N2M8 674 aaKnown RBP20.45■□□□□ 0.86
CCDC90B-202ENST00000455220 LNPKQ9C0E8 428 aa20.45■□□□□ 0.86
CCDC90B-202ENST00000455220 ANKRD2Q9GZV1 360 aa20.45■□□□□ 0.86
CCDC90B-202ENST00000455220 ZNF609O15014 1411 aa20.45■□□□□ 0.86
CCDC90B-202ENST00000455220 LTBP1Q14766 1721 aa20.45■□□□□ 0.86
CCDC90B-202ENST00000455220 TNNI3KQ59H18 835 aa20.44■□□□□ 0.86
CCDC90B-202ENST00000455220 SLC51AQ86UW1 340 aa20.44■□□□□ 0.86
CCDC90B-202ENST00000455220 C7orf43Q8WVR3 580 aa20.44■□□□□ 0.86
CCDC90B-202ENST00000455220 FHDC1Q9C0D6 1143 aaPredicted RBP20.44■□□□□ 0.86
CCDC90B-202ENST00000455220 PIM2Q9P1W9 311 aa20.44■□□□□ 0.86
CCDC90B-202ENST00000455220 ZBTB47Q9UFB7 747 aaPredicted RBP20.44■□□□□ 0.86
CCDC90B-202ENST00000455220 FPGT-TNNI3KV9GXZ4 949 aa20.44■□□□□ 0.86
CCDC90B-202ENST00000455220 FGFR2P21802 821 aa20.43■□□□□ 0.86
CCDC90B-202ENST00000455220 NLGN2Q8NFZ4 835 aa20.43■□□□□ 0.86
CCDC90B-202ENST00000455220 HELBQ8NG08 1087 aaPredicted RBP20.43■□□□□ 0.86
CCDC90B-202ENST00000455220 EAF2Q96CJ1 260 aaPredicted RBP20.43■□□□□ 0.86
CCDC90B-202ENST00000455220 AKAP2Q9Y2D5 859 aa20.43■□□□□ 0.86
CCDC90B-202ENST00000455220 PUM3Q15397 648 aaKnown RBP20.42■□□□□ 0.86
CCDC90B-202ENST00000455220 PODXL2Q9NZ53 605 aa20.42■□□□□ 0.86
CCDC90B-202ENST00000455220 SNED1Q8TER0 1413 aa20.42■□□□□ 0.86
CCDC90B-202ENST00000455220 XDHP47989 1333 aa20.42■□□□□ 0.86
CCDC90B-202ENST00000455220 TAF5LO75529 589 aa20.42■□□□□ 0.86
CCDC90B-202ENST00000455220 ARAP2Q8WZ64 1704 aa20.41■□□□□ 0.86
CCDC90B-202ENST00000455220 SALL3Q9BXA9 1300 aa20.41■□□□□ 0.86
CCDC90B-202ENST00000455220 PDE4AP27815 886 aa20.41■□□□□ 0.86
CCDC90B-202ENST00000455220 GPSM2P81274 684 aa20.41■□□□□ 0.86
CCDC90B-202ENST00000455220 ATP2B3Q16720 1220 aa20.41■□□□□ 0.86
CCDC90B-202ENST00000455220 AACSQ86V21 672 aa20.41■□□□□ 0.86
CCDC90B-202ENST00000455220 GOLGB1Q14789 3259 aaKnown RBP20.4■□□□□ 0.86
CCDC90B-202ENST00000455220 A0A1B0GUL7 405 aa20.4■□□□□ 0.86
CCDC90B-202ENST00000455220 UBE4AQ14139 1066 aa20.4■□□□□ 0.86
CCDC90B-202ENST00000455220 CC2D2BQ6DHV5 1058 aa20.4■□□□□ 0.86
CCDC90B-202ENST00000455220 C16orf71Q8IYS4 520 aaPredicted RBP20.4■□□□□ 0.86
CCDC90B-202ENST00000455220 LPIN2Q92539 896 aa20.4■□□□□ 0.86
CCDC90B-202ENST00000455220 DUOX1Q9NRD9 1551 aa20.39■□□□□ 0.86
CCDC90B-202ENST00000455220 DALRD3Q5D0E6 543 aaKnown RBP20.39■□□□□ 0.85
CCDC90B-202ENST00000455220 SYT17Q9BSW7 474 aa20.39■□□□□ 0.85
CCDC90B-202ENST00000455220 ANKIB1Q9P2G1 1089 aa20.39■□□□□ 0.85
CCDC90B-202ENST00000455220 LEMD3Q9Y2U8 911 aa20.39■□□□□ 0.85
CCDC90B-202ENST00000455220 TIMM10P62072 90 aa20.38■□□□□ 0.85
CCDC90B-202ENST00000455220 OLFM4Q6UX06 510 aa20.38■□□□□ 0.85
CCDC90B-202ENST00000455220 OTUD7AQ8TE49 926 aaPredicted RBP20.38■□□□□ 0.85
CCDC90B-202ENST00000455220 TMX4Q9H1E5 349 aaPredicted RBP20.38■□□□□ 0.85
CCDC90B-202ENST00000455220 DBNLQ9UJU6 430 aaKnown RBP20.38■□□□□ 0.85
CCDC90B-202ENST00000455220 NSFL1CQ9UNZ2 370 aaKnown RBP20.38■□□□□ 0.85
CCDC90B-202ENST00000455220 ZNF804BA4D1E1 1349 aa20.38■□□□□ 0.85
CCDC90B-202ENST00000455220 SNAP23O00161 211 aa20.38■□□□□ 0.85
CCDC90B-202ENST00000455220 IFIT2P09913 472 aaKnown RBP20.38■□□□□ 0.85
CCDC90B-202ENST00000455220 ATP2B4P23634 1241 aa20.38■□□□□ 0.85
CCDC90B-202ENST00000455220 GRIPAP1Q4V328 841 aa20.38■□□□□ 0.85
CCDC90B-202ENST00000455220 SKAP1Q86WV1 359 aa20.38■□□□□ 0.85
CCDC90B-202ENST00000455220 CCDC8Q9H0W5 538 aaPredicted RBP20.38■□□□□ 0.85
CCDC90B-202ENST00000455220 TLR7Q9NYK1 1049 aaKnown RBP20.38■□□□□ 0.85
CCDC90B-202ENST00000455220 ARFGEF1Q9Y6D6 1849 aa20.37■□□□□ 0.85
CCDC90B-202ENST00000455220 IRS2Q9Y4H2 1338 aa20.37■□□□□ 0.85
CCDC90B-202ENST00000455220 C21orf2O43822 256 aa20.37■□□□□ 0.85
CCDC90B-202ENST00000455220 SLC5A1P13866 664 aa20.37■□□□□ 0.85
CCDC90B-202ENST00000455220 SOGA3Q5TF21 947 aa20.37■□□□□ 0.85
CCDC90B-202ENST00000455220 MPNDQ8N594 471 aa20.37■□□□□ 0.85
CCDC90B-202ENST00000455220 DBNDD2Q9BQY9 259 aa20.37■□□□□ 0.85
CCDC90B-202ENST00000455220 GGA1Q9UJY5 639 aa20.37■□□□□ 0.85
CCDC90B-202ENST00000455220 WTIPA6NIX2 430 aaPredicted RBP20.36■□□□□ 0.85
CCDC90B-202ENST00000455220 IFIT1P09914 478 aaKnown RBP20.36■□□□□ 0.85
CCDC90B-202ENST00000455220 PLEKHM2Q8IWE5 1019 aa20.36■□□□□ 0.85
CCDC90B-202ENST00000455220 TBC1D16Q8TBP0 767 aa20.36■□□□□ 0.85
CCDC90B-202ENST00000455220 XAGE2Q96GT9 111 aa20.36■□□□□ 0.85
CCDC90B-202ENST00000455220 NEUROD6Q96NK8 337 aa20.36■□□□□ 0.85
CCDC90B-202ENST00000455220 BCL11AQ9H165 835 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms