RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 GGA1Q9UJY5 639 aa31.46■■■□□ 2.63
MSH2-203ENST00000454849 MINPP1Q9UNW1 487 aa31.46■■■□□ 2.63
MSH2-203ENST00000454849 RTL9Q8NET4 1388 aa31.45■■■□□ 2.63
MSH2-203ENST00000454849 YDJCA8MPS7 323 aa31.45■■■□□ 2.63
MSH2-203ENST00000454849 CT47B1P0C2W7 299 aaPredicted RBP31.45■■■□□ 2.63
MSH2-203ENST00000454849 SUCLG2Q96I99 432 aa31.45■■■□□ 2.63
MSH2-203ENST00000454849 BSDC1Q9NW68 430 aaPredicted RBP31.45■■■□□ 2.63
MSH2-203ENST00000454849 HACL1Q9UJ83 578 aa31.45■■■□□ 2.63
MSH2-203ENST00000454849 IQCA1LA6NCM1 817 aa31.44■■■□□ 2.62
MSH2-203ENST00000454849 IGHMBP2P38935 993 aaKnown RBP31.44■■■□□ 2.62
MSH2-203ENST00000454849 EAPPQ56P03 285 aaPredicted RBP31.44■■■□□ 2.62
MSH2-203ENST00000454849 SMC1BQ8NDV3 1235 aa31.44■■■□□ 2.62
MSH2-203ENST00000454849 PODXL2Q9NZ53 605 aa31.44■■■□□ 2.62
MSH2-203ENST00000454849 EYA3Q99504 573 aa31.43■■■□□ 2.62
MSH2-203ENST00000454849 KCNQ5Q9NR82 932 aa31.43■■■□□ 2.62
MSH2-203ENST00000454849 SPEF2Q9C093 1822 aa31.42■■■□□ 2.62
MSH2-203ENST00000454849 ANKRD18BA2A2Z9 1011 aa31.42■■■□□ 2.62
MSH2-203ENST00000454849 ZC3H12CQ9C0D7 883 aaKnown RBP31.42■■■□□ 2.62
MSH2-203ENST00000454849 EPHX2P34913 555 aa31.41■■■□□ 2.62
MSH2-203ENST00000454849 EPS15P42566 896 aa31.41■■■□□ 2.62
MSH2-203ENST00000454849 FSTL1Q12841 308 aa31.41■■■□□ 2.62
MSH2-203ENST00000454849 IFIT5Q13325 482 aaKnown RBP31.41■■■□□ 2.62
MSH2-203ENST00000454849 KAZALD1Q96I82 304 aa31.41■■■□□ 2.62
MSH2-203ENST00000454849 ZNF594Q96JF6 807 aaPredicted RBP31.41■■■□□ 2.62
MSH2-203ENST00000454849 MPHOSPH8Q99549 860 aa31.41■■■□□ 2.62
MSH2-203ENST00000454849 XDHP47989 1333 aa31.41■■■□□ 2.62
MSH2-203ENST00000454849 SCNN1DP51172 638 aa31.4■■■□□ 2.62
MSH2-203ENST00000454849 CIAPIN1Q6FI81 312 aa31.4■■■□□ 2.62
MSH2-203ENST00000454849 LTBP1Q14766 1721 aa31.4■■■□□ 2.62
MSH2-203ENST00000454849 ECE2O60344 883 aa31.39■■■□□ 2.62
MSH2-203ENST00000454849 HTRA3P83110 453 aa31.39■■■□□ 2.62
MSH2-203ENST00000454849 CLEC11AQ9Y240 323 aa31.39■■■□□ 2.62
MSH2-203ENST00000454849 G3V3G9 751 aa31.38■■■□□ 2.61
MSH2-203ENST00000454849 BCAR3O75815 825 aa31.38■■■□□ 2.61
MSH2-203ENST00000454849 GMPSP49915 693 aaPredicted RBP31.38■■■□□ 2.61
MSH2-203ENST00000454849 DCAF8Q5TAQ9 597 aa31.38■■■□□ 2.61
MSH2-203ENST00000454849 ATP2B4P23634 1241 aa31.37■■■□□ 2.61
MSH2-203ENST00000454849 LMOD1P29536 600 aaPredicted RBP31.37■■■□□ 2.61
MSH2-203ENST00000454849 HELBQ8NG08 1087 aaPredicted RBP31.37■■■□□ 2.61
MSH2-203ENST00000454849 USP44Q9H0E7 712 aa31.37■■■□□ 2.61
MSH2-203ENST00000454849 CCDC57Q2TAC2 916 aa31.36■■■□□ 2.61
MSH2-203ENST00000454849 CHADLQ6NUI6 762 aa31.36■■■□□ 2.61
MSH2-203ENST00000454849 BICC1Q9H694 974 aaKnown RBP31.36■■■□□ 2.61
MSH2-203ENST00000454849 ZBTB12Q9Y330 459 aaPredicted RBP31.36■■■□□ 2.61
MSH2-203ENST00000454849 UTYO14607 1347 aa31.35■■■□□ 2.61
MSH2-203ENST00000454849 PSMD14O00487 310 aa31.35■■■□□ 2.61
MSH2-203ENST00000454849 CCT4P50991 539 aaKnown RBP31.35■■■□□ 2.61
MSH2-203ENST00000454849 TNIP1Q15025 636 aa31.35■■■□□ 2.61
MSH2-203ENST00000454849 TAF7LQ5H9L4 462 aa31.35■■■□□ 2.61
MSH2-203ENST00000454849 SCN4AP35499 1836 aa31.34■■■□□ 2.61
MSH2-203ENST00000454849 SHTN1A0MZ66 631 aa31.34■■■□□ 2.61
MSH2-203ENST00000454849 SNAP23O00161 211 aa31.34■■■□□ 2.61
MSH2-203ENST00000454849 FRAT1Q92837 279 aaPredicted RBP31.34■■■□□ 2.61
MSH2-203ENST00000454849 API5Q9BZZ5 524 aaKnown RBP31.34■■■□□ 2.61
MSH2-203ENST00000454849 TNNQ9UQP3 1299 aa31.34■■■□□ 2.61
MSH2-203ENST00000454849 TAF5LO75529 589 aa31.33■■■□□ 2.61
MSH2-203ENST00000454849 BRPF1P55201 1214 aaPredicted RBP31.33■■■□□ 2.61
MSH2-203ENST00000454849 CHRNDQ07001 517 aa31.33■■■□□ 2.61
MSH2-203ENST00000454849 ZBED9Q6R2W3 1325 aa31.32■■■□□ 2.6
MSH2-203ENST00000454849 PLIN1O60240 522 aa31.32■■■□□ 2.6
MSH2-203ENST00000454849 KLRK1P26718 216 aa31.32■■■□□ 2.6
MSH2-203ENST00000454849 LDHDQ86WU2 507 aa31.32■■■□□ 2.6
MSH2-203ENST00000454849 ANKRD44Q8N8A2 993 aa31.32■■■□□ 2.6
MSH2-203ENST00000454849 GPRC5DQ9NZD1 345 aa31.32■■■□□ 2.6
MSH2-203ENST00000454849 APLP1P51693 650 aa31.31■■■□□ 2.6
MSH2-203ENST00000454849 TXNRD3Q86VQ6 643 aa31.31■■■□□ 2.6
MSH2-203ENST00000454849 MAP1SQ66K74 1059 aaPredicted RBP31.3■■■□□ 2.6
MSH2-203ENST00000454849 LDHAL6AQ6ZMR3 332 aa31.3■■■□□ 2.6
MSH2-203ENST00000454849 ANKRD2Q9GZV1 360 aa31.3■■■□□ 2.6
MSH2-203ENST00000454849 CEP350Q5VT06 3117 aa31.29■■■□□ 2.6
MSH2-203ENST00000454849 KCNJ4P48050 445 aa31.29■■■□□ 2.6
MSH2-203ENST00000454849 PNMA8AQ86V59 439 aaPredicted RBP31.29■■■□□ 2.6
MSH2-203ENST00000454849 PUS3Q9BZE2 481 aaKnown RBP31.29■■■□□ 2.6
MSH2-203ENST00000454849 CNNM1Q9NRU3 951 aa31.29■■■□□ 2.6
MSH2-203ENST00000454849 ZNF804BA4D1E1 1349 aa31.28■■■□□ 2.6
MSH2-203ENST00000454849 CNOT7Q9UIV1 285 aaKnown RBP31.28■■■□□ 2.6
MSH2-203ENST00000454849 LEMD3Q9Y2U8 911 aa31.28■■■□□ 2.6
MSH2-203ENST00000454849 KIF16BQ96L93 1317 aa31.27■■■□□ 2.6
MSH2-203ENST00000454849 CLUAP1Q96AJ1 413 aa31.27■■■□□ 2.6
MSH2-203ENST00000454849 KLHDC4Q8TBB5 520 aa31.26■■■□□ 2.59
MSH2-203ENST00000454849 RABL6Q3YEC7 729 aaPredicted RBP31.25■■■□□ 2.59
MSH2-203ENST00000454849 MICALL2Q8IY33 904 aa31.25■■■□□ 2.59
MSH2-203ENST00000454849 SCN9AQ15858 1988 aa31.25■■■□□ 2.59
MSH2-203ENST00000454849 TRIM27P14373 513 aa31.24■■■□□ 2.59
MSH2-203ENST00000454849 ARHGAP45Q92619 1136 aa31.24■■■□□ 2.59
MSH2-203ENST00000454849 FBXW7Q969H0 707 aa31.24■■■□□ 2.59
MSH2-203ENST00000454849 ADARB2Q9NS39 739 aaKnown RBP31.24■■■□□ 2.59
MSH2-203ENST00000454849 MED23Q9ULK4 1368 aa31.24■■■□□ 2.59
MSH2-203ENST00000454849 UBTFL1P0CB47 393 aaPredicted RBP31.23■■■□□ 2.59
MSH2-203ENST00000454849 TRPM4Q8TD43 1214 aa31.23■■■□□ 2.59
MSH2-203ENST00000454849 IPO8O15397 1037 aaKnown RBP31.22■■■□□ 2.59
MSH2-203ENST00000454849 VIL1P09327 827 aaKnown RBP31.22■■■□□ 2.59
MSH2-203ENST00000454849 RBM26Q5T8P6 1007 aaKnown RBP31.22■■■□□ 2.59
MSH2-203ENST00000454849 USP50Q70EL3 339 aaPredicted RBP31.22■■■□□ 2.59
MSH2-203ENST00000454849 CNTROBQ8N137 903 aa31.22■■■□□ 2.59
MSH2-203ENST00000454849 MEIS3Q99687 375 aa31.22■■■□□ 2.59
MSH2-203ENST00000454849 MXD3Q9BW11 206 aa31.22■■■□□ 2.59
MSH2-203ENST00000454849 ITGBL1O95965 494 aaPredicted RBP31.21■■■□□ 2.59
MSH2-203ENST00000454849 HIRAP54198 1017 aaPredicted RBP31.21■■■□□ 2.59
MSH2-203ENST00000454849 LRRC24Q50LG9 513 aa31.21■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms