RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 FAM161AQ3B820 660 aa18.49■□□□□ 0.55
HSPG2-207ENST00000453796 SLC4A10Q6U841 1118 aa18.49■□□□□ 0.55
HSPG2-207ENST00000453796 LDHDQ86WU2 507 aa18.49■□□□□ 0.55
HSPG2-207ENST00000453796 GPR101Q96P66 508 aaPredicted RBP18.49■□□□□ 0.55
HSPG2-207ENST00000453796 EYA3Q99504 573 aa18.49■□□□□ 0.55
HSPG2-207ENST00000453796 SRCIN1Q9C0H9 1055 aa18.49■□□□□ 0.55
HSPG2-207ENST00000453796 ZNF646O15015 1829 aaPredicted RBP18.49■□□□□ 0.55
HSPG2-207ENST00000453796 XDHP47989 1333 aa18.49■□□□□ 0.55
HSPG2-207ENST00000453796 EPS15P42566 896 aa18.48■□□□□ 0.55
HSPG2-207ENST00000453796 CIAPIN1Q6FI81 312 aa18.48■□□□□ 0.55
HSPG2-207ENST00000453796 BCL2L13Q9BXK5 485 aa18.48■□□□□ 0.55
HSPG2-207ENST00000453796 DBNDD1Q9H9R9 158 aa18.48■□□□□ 0.55
HSPG2-207ENST00000453796 ANKIB1Q9P2G1 1089 aa18.48■□□□□ 0.55
HSPG2-207ENST00000453796 GGA1Q9UJY5 639 aa18.48■□□□□ 0.55
HSPG2-207ENST00000453796 MINPP1Q9UNW1 487 aa18.48■□□□□ 0.55
HSPG2-207ENST00000453796 UTYO14607 1347 aa18.48■□□□□ 0.55
HSPG2-207ENST00000453796 RIMBP2O15034 1052 aa18.47■□□□□ 0.55
HSPG2-207ENST00000453796 RAD17O75943 681 aa18.47■□□□□ 0.55
HSPG2-207ENST00000453796 UFL1O94874 794 aa18.47■□□□□ 0.55
HSPG2-207ENST00000453796 EPHA10Q5JZY3 1008 aa18.47■□□□□ 0.55
HSPG2-207ENST00000453796 PNMA8AQ86V59 439 aaPredicted RBP18.47■□□□□ 0.55
HSPG2-207ENST00000453796 DNAJC5GQ8N7S2 189 aa18.47■□□□□ 0.55
HSPG2-207ENST00000453796 GPRC5DQ9NZD1 345 aa18.47■□□□□ 0.55
HSPG2-207ENST00000453796 ATP2B4P23634 1241 aa18.46■□□□□ 0.55
HSPG2-207ENST00000453796 LMOD1P29536 600 aaPredicted RBP18.46■□□□□ 0.55
HSPG2-207ENST00000453796 HTRA3P83110 453 aa18.46■□□□□ 0.55
HSPG2-207ENST00000453796 EAPPQ56P03 285 aaPredicted RBP18.46■□□□□ 0.55
HSPG2-207ENST00000453796 WTIPA6NIX2 430 aaPredicted RBP18.45■□□□□ 0.54
HSPG2-207ENST00000453796 ECE2O60344 883 aa18.45■□□□□ 0.54
HSPG2-207ENST00000453796 IGHMBP2P38935 993 aaKnown RBP18.45■□□□□ 0.54
HSPG2-207ENST00000453796 GMPSP49915 693 aaPredicted RBP18.45■□□□□ 0.54
HSPG2-207ENST00000453796 BRPF1P55201 1214 aaPredicted RBP18.45■□□□□ 0.54
HSPG2-207ENST00000453796 TNIP1Q15025 636 aa18.45■□□□□ 0.54
HSPG2-207ENST00000453796 DOK7Q18PE1 504 aa18.45■□□□□ 0.54
HSPG2-207ENST00000453796 KAZALD1Q96I82 304 aa18.45■□□□□ 0.54
HSPG2-207ENST00000453796 ZC3H12CQ9C0D7 883 aaKnown RBP18.45■□□□□ 0.54
HSPG2-207ENST00000453796 SMC4Q9NTJ3 1288 aa18.45■□□□□ 0.54
HSPG2-207ENST00000453796 C9orf78Q9NZ63 289 aaPredicted RBP18.45■□□□□ 0.54
HSPG2-207ENST00000453796 PASKQ96RG2 1323 aa18.45■□□□□ 0.54
HSPG2-207ENST00000453796 ITGBL1O95965 494 aaPredicted RBP18.44■□□□□ 0.54
HSPG2-207ENST00000453796 NBPF7P0C2Y1 421 aaPredicted RBP18.44■□□□□ 0.54
HSPG2-207ENST00000453796 LMBR1LQ6UX01 489 aa18.44■□□□□ 0.54
HSPG2-207ENST00000453796 KCNQ5Q9NR82 932 aa18.44■□□□□ 0.54
HSPG2-207ENST00000453796 MED23Q9ULK4 1368 aa18.43■□□□□ 0.54
HSPG2-207ENST00000453796 ANKRD18BA2A2Z9 1011 aa18.43■□□□□ 0.54
HSPG2-207ENST00000453796 PSMD14O00487 310 aa18.43■□□□□ 0.54
HSPG2-207ENST00000453796 CCT4P50991 539 aaKnown RBP18.43■□□□□ 0.54
HSPG2-207ENST00000453796 USP50Q70EL3 339 aaPredicted RBP18.43■□□□□ 0.54
HSPG2-207ENST00000453796 SUCLG2Q96I99 432 aa18.43■□□□□ 0.54
HSPG2-207ENST00000453796 TRPM7Q96QT4 1865 aa18.42■□□□□ 0.54
HSPG2-207ENST00000453796 ADARB2Q9NS39 739 aaKnown RBP18.42■□□□□ 0.54
HSPG2-207ENST00000453796 ZNF609O15014 1411 aa18.41■□□□□ 0.54
HSPG2-207ENST00000453796 RARSP54136 660 aaKnown RBP18.41■□□□□ 0.54
HSPG2-207ENST00000453796 IFIT5Q13325 482 aaKnown RBP18.41■□□□□ 0.54
HSPG2-207ENST00000453796 DPF2Q92785 391 aa18.41■□□□□ 0.54
HSPG2-207ENST00000453796 MPHOSPH8Q99549 860 aa18.41■□□□□ 0.54
HSPG2-207ENST00000453796 CLEC11AQ9Y240 323 aa18.41■□□□□ 0.54
HSPG2-207ENST00000453796 LEMD3Q9Y2U8 911 aa18.41■□□□□ 0.54
HSPG2-207ENST00000453796 ZBTB12Q9Y330 459 aaPredicted RBP18.41■□□□□ 0.54
HSPG2-207ENST00000453796 SHTN1A0MZ66 631 aa18.4■□□□□ 0.54
HSPG2-207ENST00000453796 VIL1P09327 827 aaKnown RBP18.4■□□□□ 0.54
HSPG2-207ENST00000453796 CHRNDQ07001 517 aa18.4■□□□□ 0.54
HSPG2-207ENST00000453796 RABL6Q3YEC7 729 aaPredicted RBP18.4■□□□□ 0.54
HSPG2-207ENST00000453796 MAP1SQ66K74 1059 aaPredicted RBP18.4■□□□□ 0.54
HSPG2-207ENST00000453796 CNTROBQ8N137 903 aa18.4■□□□□ 0.54
HSPG2-207ENST00000453796 USP44Q9H0E7 712 aa18.4■□□□□ 0.54
HSPG2-207ENST00000453796 CNOT7Q9UIV1 285 aaKnown RBP18.4■□□□□ 0.54
HSPG2-207ENST00000453796 POLR2AP24928 1970 aaKnown RBP18.4■□□□□ 0.54
HSPG2-207ENST00000453796 RPS12P25398 132 aaKnown RBP18.39■□□□□ 0.53
HSPG2-207ENST00000453796 HNRNPUQ00839 825 aaKnown RBP eCLIP18.39■□□□□ 0.53
HSPG2-207ENST00000453796 TXNRD3Q86VQ6 643 aa18.39■□□□□ 0.53
HSPG2-207ENST00000453796 KLRG1Q96E93 195 aa18.39■□□□□ 0.53
HSPG2-207ENST00000453796 ANKRD2Q9GZV1 360 aa18.39■□□□□ 0.53
HSPG2-207ENST00000453796 NOB1Q9ULX3 412 aaKnown RBP18.39■□□□□ 0.53
HSPG2-207ENST00000453796 CHMP3Q9Y3E7 222 aa18.39■□□□□ 0.53
HSPG2-207ENST00000453796 IRS2Q9Y4H2 1338 aa18.39■□□□□ 0.53
HSPG2-207ENST00000453796 HIRAP54198 1017 aaPredicted RBP18.38■□□□□ 0.53
HSPG2-207ENST00000453796 CCDC57Q2TAC2 916 aa18.38■□□□□ 0.53
HSPG2-207ENST00000453796 PODNQ7Z5L7 613 aa18.38■□□□□ 0.53
HSPG2-207ENST00000453796 MICALL2Q8IY33 904 aa18.38■□□□□ 0.53
HSPG2-207ENST00000453796 TRPM4Q8TD43 1214 aa18.38■□□□□ 0.53
HSPG2-207ENST00000453796 ZNF594Q96JF6 807 aaPredicted RBP18.38■□□□□ 0.53
HSPG2-207ENST00000453796 BICC1Q9H694 974 aaKnown RBP18.38■□□□□ 0.53
HSPG2-207ENST00000453796 PGAP2Q9UHJ9 254 aa18.38■□□□□ 0.53
HSPG2-207ENST00000453796 ZNF804BA4D1E1 1349 aa18.38■□□□□ 0.53
HSPG2-207ENST00000453796 G3V3G9 751 aa18.37■□□□□ 0.53
HSPG2-207ENST00000453796 DCAF8Q5TAQ9 597 aa18.37■□□□□ 0.53
HSPG2-207ENST00000453796 ANKRD44Q8N8A2 993 aa18.37■□□□□ 0.53
HSPG2-207ENST00000453796 CREBZFQ9NS37 354 aa18.37■□□□□ 0.53
HSPG2-207ENST00000453796 SNAP23O00161 211 aa18.36■□□□□ 0.53
HSPG2-207ENST00000453796 KLRK1P26718 216 aa18.36■□□□□ 0.53
HSPG2-207ENST00000453796 GMLQ99445 158 aa18.36■□□□□ 0.53
HSPG2-207ENST00000453796 KIF16BQ96L93 1317 aa18.35■□□□□ 0.53
HSPG2-207ENST00000453796 H7C1D1 291 aa18.35■□□□□ 0.53
HSPG2-207ENST00000453796 TAF5LO75529 589 aa18.35■□□□□ 0.53
HSPG2-207ENST00000453796 RSBN1LQ6PCB5 846 aaPredicted RBP18.35■□□□□ 0.53
HSPG2-207ENST00000453796 LDHAL6AQ6ZMR3 332 aa18.35■□□□□ 0.53
HSPG2-207ENST00000453796 C15orf52Q6ZUT6 534 aaKnown RBP18.35■□□□□ 0.53
HSPG2-207ENST00000453796 JMYQ8N9B5 988 aa18.35■□□□□ 0.53
HSPG2-207ENST00000453796 HELBQ8NG08 1087 aaPredicted RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms