RNA–Protein interactions for RNA: ENST00000452906.3

HIGD1A-204, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

TSL 2 BASIC

Gene HIGD1A, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-204ENST00000452906 CHMP3Q9Y3E7 222 aa24.05■■□□□ 1.44
HIGD1A-204ENST00000452906 GLTPD2A6NH11 291 aa24.04■■□□□ 1.44
HIGD1A-204ENST00000452906 SMARCA5O60264 1052 aaPredicted RBP24.04■■□□□ 1.44
HIGD1A-204ENST00000452906 NPR1P16066 1061 aa24.04■■□□□ 1.44
HIGD1A-204ENST00000452906 APLP1P51693 650 aa24.04■■□□□ 1.44
HIGD1A-204ENST00000452906 FAM89AQ96GI7 184 aa24.04■■□□□ 1.44
HIGD1A-204ENST00000452906 UBN2Q6ZU65 1347 aa24.04■■□□□ 1.44
HIGD1A-204ENST00000452906 IRS4O14654 1257 aaPredicted RBP24.03■■□□□ 1.44
HIGD1A-204ENST00000452906 PDE8AO60658 829 aa24.03■■□□□ 1.44
HIGD1A-204ENST00000452906 JARID2Q92833 1246 aaPredicted RBP24.03■■□□□ 1.44
HIGD1A-204ENST00000452906 GPATCH3Q96I76 525 aa24.03■■□□□ 1.44
HIGD1A-204ENST00000452906 TAOK3Q9H2K8 898 aa24.03■■□□□ 1.44
HIGD1A-204ENST00000452906 MX1P20591 662 aa24.02■■□□□ 1.44
HIGD1A-204ENST00000452906 RFX5P48382 616 aaPredicted RBP24.02■■□□□ 1.44
HIGD1A-204ENST00000452906 FSTL1Q12841 308 aa24.02■■□□□ 1.44
HIGD1A-204ENST00000452906 CCDC57Q2TAC2 916 aa24.02■■□□□ 1.44
HIGD1A-204ENST00000452906 C8orf34Q49A92 452 aa24.02■■□□□ 1.44
HIGD1A-204ENST00000452906 RTL5Q5HYW3 569 aaPredicted RBP24.02■■□□□ 1.44
HIGD1A-204ENST00000452906 TTC22Q5TAA0 569 aa24.02■■□□□ 1.44
HIGD1A-204ENST00000452906 RRAGCQ9HB90 399 aa24.02■■□□□ 1.44
HIGD1A-204ENST00000452906 DDX60Q8IY21 1712 aaKnown RBP24.01■■□□□ 1.43
HIGD1A-204ENST00000452906 WDR90Q96KV7 1748 aa24.01■■□□□ 1.43
HIGD1A-204ENST00000452906 FAM177BA6PVY3 158 aa24.01■■□□□ 1.43
HIGD1A-204ENST00000452906 CSF1RP07333 972 aa24.01■■□□□ 1.43
HIGD1A-204ENST00000452906 CTSWP56202 376 aa24.01■■□□□ 1.43
HIGD1A-204ENST00000452906 ZNF219Q9P2Y4 722 aaPredicted RBP24.01■■□□□ 1.43
HIGD1A-204ENST00000452906 STAP2Q9UGK3 403 aa24.01■■□□□ 1.43
HIGD1A-204ENST00000452906 CIAO1O76071 339 aa24■■□□□ 1.43
HIGD1A-204ENST00000452906 PTPN12Q05209 780 aaKnown RBP24■■□□□ 1.43
HIGD1A-204ENST00000452906 PA2G4Q9UQ80 394 aaKnown RBP24■■□□□ 1.43
HIGD1A-204ENST00000452906 RIC1Q4ADV7 1423 aa24■■□□□ 1.43
HIGD1A-204ENST00000452906 PDE1AP54750 535 aa23.99■■□□□ 1.43
HIGD1A-204ENST00000452906 IFIT5Q13325 482 aaKnown RBP23.99■■□□□ 1.43
HIGD1A-204ENST00000452906 SUSD4Q5VX71 490 aa23.99■■□□□ 1.43
HIGD1A-204ENST00000452906 DPY19L2Q6NUT2 758 aa23.99■■□□□ 1.43
HIGD1A-204ENST00000452906 TTC41PQ6P2S7 1318 aa23.99■■□□□ 1.43
HIGD1A-204ENST00000452906 SALL3Q9BXA9 1300 aa23.99■■□□□ 1.43
HIGD1A-204ENST00000452906 NTSR2O95665 410 aa23.98■■□□□ 1.43
HIGD1A-204ENST00000452906 VEGFAP15692 232 aaPredicted RBP23.98■■□□□ 1.43
HIGD1A-204ENST00000452906 IL15P40933 162 aaPredicted RBP23.98■■□□□ 1.43
HIGD1A-204ENST00000452906 ERFEQ4G0M1 354 aa23.98■■□□□ 1.43
HIGD1A-204ENST00000452906 TAF7LQ5H9L4 462 aa23.98■■□□□ 1.43
HIGD1A-204ENST00000452906 C7orf43Q8WVR3 580 aa23.98■■□□□ 1.43
HIGD1A-204ENST00000452906 IFIT2P09913 472 aaKnown RBP23.97■■□□□ 1.43
HIGD1A-204ENST00000452906 ALDH1B1P30837 517 aa23.97■■□□□ 1.43
HIGD1A-204ENST00000452906 CCDC93Q567U6 631 aa23.97■■□□□ 1.43
HIGD1A-204ENST00000452906 SIL1Q9H173 461 aa23.97■■□□□ 1.43
HIGD1A-204ENST00000452906 UPF2Q9HAU5 1272 aaKnown RBP23.97■■□□□ 1.43
HIGD1A-204ENST00000452906 IL1RAPL2Q9NP60 686 aa23.97■■□□□ 1.43
HIGD1A-204ENST00000452906 RBM19Q9Y4C8 960 aaKnown RBP23.97■■□□□ 1.43
HIGD1A-204ENST00000452906 AK9Q5TCS8 1911 aa23.96■■□□□ 1.43
HIGD1A-204ENST00000452906 RTL9Q8NET4 1388 aa23.96■■□□□ 1.43
HIGD1A-204ENST00000452906 ANKRD18BA2A2Z9 1011 aa23.96■■□□□ 1.43
HIGD1A-204ENST00000452906 ERC2O15083 957 aa23.96■■□□□ 1.43
HIGD1A-204ENST00000452906 CRY2Q49AN0 593 aa23.96■■□□□ 1.43
HIGD1A-204ENST00000452906 CASC1Q6TDU7 716 aa23.96■■□□□ 1.43
HIGD1A-204ENST00000452906 SMC1BQ8NDV3 1235 aa23.96■■□□□ 1.43
HIGD1A-204ENST00000452906 TTLL11Q8NHH1 800 aa23.96■■□□□ 1.43
HIGD1A-204ENST00000452906 ABCC12Q96J65 1359 aa23.95■■□□□ 1.42
HIGD1A-204ENST00000452906 EYA2O00167 538 aa23.95■■□□□ 1.42
HIGD1A-204ENST00000452906 GPR108Q9NPR9 543 aa23.95■■□□□ 1.42
HIGD1A-204ENST00000452906 SASH1O94885 1247 aa23.94■■□□□ 1.42
HIGD1A-204ENST00000452906 CCDC152Q4G0S7 254 aa23.94■■□□□ 1.42
HIGD1A-204ENST00000452906 BCL11AQ9H165 835 aa23.94■■□□□ 1.42
HIGD1A-204ENST00000452906 CDC45O75419 566 aa23.93■■□□□ 1.42
HIGD1A-204ENST00000452906 AACSQ86V21 672 aa23.93■■□□□ 1.42
HIGD1A-204ENST00000452906 RTKN2Q8IZC4 609 aa23.93■■□□□ 1.42
HIGD1A-204ENST00000452906 OTUD7AQ8TE49 926 aaPredicted RBP23.93■■□□□ 1.42
HIGD1A-204ENST00000452906 SCN4AP35499 1836 aa23.92■■□□□ 1.42
HIGD1A-204ENST00000452906 GLRX3O76003 335 aaKnown RBP23.92■■□□□ 1.42
HIGD1A-204ENST00000452906 NUTM1Q86Y26 1132 aa23.92■■□□□ 1.42
HIGD1A-204ENST00000452906 KLHDC4Q8TBB5 520 aa23.92■■□□□ 1.42
HIGD1A-204ENST00000452906 ITGA6P23229 1130 aa23.91■■□□□ 1.42
HIGD1A-204ENST00000452906 FKBP4Q02790 459 aaKnown RBP eCLIP23.91■■□□□ 1.42
HIGD1A-204ENST00000452906 ECHDC1Q9NTX5 307 aa23.91■■□□□ 1.42
HIGD1A-204ENST00000452906 AKAP2Q9Y2D5 859 aa23.91■■□□□ 1.42
HIGD1A-204ENST00000452906 GSPT1P15170 499 aaKnown RBP23.9■■□□□ 1.42
HIGD1A-204ENST00000452906 SLC10A5Q5PT55 438 aa23.9■■□□□ 1.42
HIGD1A-204ENST00000452906 RPGRQ92834 1020 aaKnown RBP23.9■■□□□ 1.42
HIGD1A-204ENST00000452906 HOXA10P31260 410 aaPredicted RBP23.89■■□□□ 1.41
HIGD1A-204ENST00000452906 CC2D2BQ6DHV5 1058 aa23.89■■□□□ 1.41
HIGD1A-204ENST00000452906 NLRP3Q96P20 1036 aa23.89■■□□□ 1.41
HIGD1A-204ENST00000452906 CEP126Q9P2H0 1117 aa23.89■■□□□ 1.41
HIGD1A-204ENST00000452906 POTECB2RU33 542 aa23.88■■□□□ 1.41
HIGD1A-204ENST00000452906 TFCP2Q12800 502 aa23.88■■□□□ 1.41
HIGD1A-204ENST00000452906 GRIPAP1Q4V328 841 aa23.88■■□□□ 1.41
HIGD1A-204ENST00000452906 TNNI3KQ59H18 835 aa23.88■■□□□ 1.41
HIGD1A-204ENST00000452906 ATG9AQ7Z3C6 839 aa23.88■■□□□ 1.41
HIGD1A-204ENST00000452906 SYNE4Q8N205 404 aa23.88■■□□□ 1.41
HIGD1A-204ENST00000452906 DNAJC5GQ8N7S2 189 aa23.88■■□□□ 1.41
HIGD1A-204ENST00000452906 GREM2Q9H772 168 aa23.88■■□□□ 1.41
HIGD1A-204ENST00000452906 FPGT-TNNI3KV9GXZ4 949 aa23.88■■□□□ 1.41
HIGD1A-204ENST00000452906 SNED1Q8TER0 1413 aa23.87■■□□□ 1.41
HIGD1A-204ENST00000452906 HCLS1P14317 486 aaPredicted RBP23.87■■□□□ 1.41
HIGD1A-204ENST00000452906 ANP32AP39687 249 aaKnown RBP23.87■■□□□ 1.41
HIGD1A-204ENST00000452906 CDC5LQ99459 802 aaKnown RBP23.87■■□□□ 1.41
HIGD1A-204ENST00000452906 ZNF609O15014 1411 aa23.86■■□□□ 1.41
HIGD1A-204ENST00000452906 SDSP20132 328 aa23.86■■□□□ 1.41
HIGD1A-204ENST00000452906 SF3B3Q15393 1217 aaKnown RBP23.86■■□□□ 1.41
HIGD1A-204ENST00000452906 LDHAL6AQ6ZMR3 332 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms