RNA–Protein interactions for RNA: ENST00000450650.5

CAPN13-202, Transcript of calpain 13, humanhuman

TSL 2

Gene CAPN13, Length 2,328 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-202ENST00000450650 ERVV-2B6SEH9 535 aa11.15□□□□□ -0.62
CAPN13-202ENST00000450650 DDX58O95786 925 aaKnown RBP11.15□□□□□ -0.62
CAPN13-202ENST00000450650 MSNP26038 577 aaKnown RBP11.15□□□□□ -0.62
CAPN13-202ENST00000450650 PDIA6Q15084 440 aa11.15□□□□□ -0.62
CAPN13-202ENST00000450650 C9orf131Q5VYM1 1079 aa11.15□□□□□ -0.62
CAPN13-202ENST00000450650 SASS6Q6UVJ0 657 aa11.15□□□□□ -0.62
CAPN13-202ENST00000450650 ZNF467Q7Z7K2 595 aaPredicted RBP11.15□□□□□ -0.62
CAPN13-202ENST00000450650 PLEKHM2Q8IWE5 1019 aa11.15□□□□□ -0.62
CAPN13-202ENST00000450650 BTG4Q9NY30 223 aa11.15□□□□□ -0.62
CAPN13-202ENST00000450650 GABBR1Q9UBS5 961 aa11.15□□□□□ -0.62
CAPN13-202ENST00000450650 MAP3K2Q9Y2U5 619 aa11.15□□□□□ -0.62
CAPN13-202ENST00000450650 COL14A1Q05707 1796 aaKnown RBP11.14□□□□□ -0.63
CAPN13-202ENST00000450650 NBPF5PQ86XG9 351 aaPredicted RBP11.14□□□□□ -0.63
CAPN13-202ENST00000450650 SHANK3Q9BYB0 1731 aa11.14□□□□□ -0.63
CAPN13-202ENST00000450650 PNMA6EA0A0J9YXQ4 647 aa11.14□□□□□ -0.63
CAPN13-202ENST00000450650 ALDH1L1O75891 902 aa11.13□□□□□ -0.63
CAPN13-202ENST00000450650 SSR1P43307 286 aaKnown RBP11.13□□□□□ -0.63
CAPN13-202ENST00000450650 DDX54Q8TDD1 881 aaKnown RBP11.13□□□□□ -0.63
CAPN13-202ENST00000450650 BORCS6Q96GS4 357 aa11.13□□□□□ -0.63
CAPN13-202ENST00000450650 BSDC1Q9NW68 430 aaPredicted RBP11.13□□□□□ -0.63
CAPN13-202ENST00000450650 NBPF7P0C2Y1 421 aaPredicted RBP11.13□□□□□ -0.63
CAPN13-202ENST00000450650 GTF2A1P52655 376 aaPredicted RBP11.13□□□□□ -0.63
CAPN13-202ENST00000450650 C16orf71Q8IYS4 520 aaPredicted RBP11.13□□□□□ -0.63
CAPN13-202ENST00000450650 EXOC6BQ9Y2D4 811 aa11.13□□□□□ -0.63
CAPN13-202ENST00000450650 AIMP1Q12904 312 aaKnown RBP11.12□□□□□ -0.63
CAPN13-202ENST00000450650 ZKSCAN8Q15776 578 aaPredicted RBP11.12□□□□□ -0.63
CAPN13-202ENST00000450650 CASC1Q6TDU7 716 aa11.12□□□□□ -0.63
CAPN13-202ENST00000450650 LARGE2Q8N3Y3 721 aa11.12□□□□□ -0.63
CAPN13-202ENST00000450650 NME8Q8N427 588 aa11.12□□□□□ -0.63
CAPN13-202ENST00000450650 SSH3Q8TE77 659 aa11.12□□□□□ -0.63
CAPN13-202ENST00000450650 FEZ2Q9UHY8 353 aaPredicted RBP11.12□□□□□ -0.63
CAPN13-202ENST00000450650 GLI3P10071 1580 aa11.12□□□□□ -0.63
CAPN13-202ENST00000450650 IBTKQ9P2D0 1353 aaPredicted RBP11.12□□□□□ -0.63
CAPN13-202ENST00000450650 ADAMTS2O95450 1211 aa11.12□□□□□ -0.63
CAPN13-202ENST00000450650 RECKO95980 971 aa11.12□□□□□ -0.63
CAPN13-202ENST00000450650 MYL6BP14649 208 aa11.12□□□□□ -0.63
CAPN13-202ENST00000450650 GSPT1P15170 499 aaKnown RBP11.12□□□□□ -0.63
CAPN13-202ENST00000450650 ARID4AP29374 1257 aaPredicted RBP11.12□□□□□ -0.63
CAPN13-202ENST00000450650 NOP2P46087 812 aaKnown RBP11.12□□□□□ -0.63
CAPN13-202ENST00000450650 GABPB1Q06547 395 aaPredicted RBP11.12□□□□□ -0.63
CAPN13-202ENST00000450650 FOXD4Q12950 439 aaPredicted RBP11.12□□□□□ -0.63
CAPN13-202ENST00000450650 TTC22Q5TAA0 569 aa11.12□□□□□ -0.63
CAPN13-202ENST00000450650 OTUD7AQ8TE49 926 aaPredicted RBP11.12□□□□□ -0.63
CAPN13-202ENST00000450650 LRRCC1Q9C099 1032 aa11.12□□□□□ -0.63
CAPN13-202ENST00000450650 CALCOCO1Q9P1Z2 691 aa11.12□□□□□ -0.63
CAPN13-202ENST00000450650 ZBTB12Q9Y330 459 aaPredicted RBP11.12□□□□□ -0.63
CAPN13-202ENST00000450650 USP16Q9Y5T5 823 aa11.12□□□□□ -0.63
CAPN13-202ENST00000450650 LAMB4A4D0S4 1761 aa11.11□□□□□ -0.63
CAPN13-202ENST00000450650 NUTM2BA6NNL0 878 aaPredicted RBP11.11□□□□□ -0.63
CAPN13-202ENST00000450650 NUTM2EB1AL46 878 aaPredicted RBP11.11□□□□□ -0.63
CAPN13-202ENST00000450650 PAX3P23760 479 aa11.11□□□□□ -0.63
CAPN13-202ENST00000450650 CSPP1Q1MSJ5 1256 aa11.11□□□□□ -0.63
CAPN13-202ENST00000450650 PPP1R42Q7Z4L9 355 aa11.11□□□□□ -0.63
CAPN13-202ENST00000450650 NUTM2AQ8IVF1 878 aaPredicted RBP11.11□□□□□ -0.63
CAPN13-202ENST00000450650 LINS1Q8NG48 757 aa11.11□□□□□ -0.63
CAPN13-202ENST00000450650 PMM1Q92871 262 aa11.11□□□□□ -0.63
CAPN13-202ENST00000450650 PPP1R9BQ96SB3 815 aa11.11□□□□□ -0.63
CAPN13-202ENST00000450650 C9orf78Q9NZ63 289 aaPredicted RBP11.11□□□□□ -0.63
CAPN13-202ENST00000450650 PPFIA4O75335 1185 aa11.1□□□□□ -0.63
CAPN13-202ENST00000450650 RIC3Q7Z5B4 369 aa11.1□□□□□ -0.63
CAPN13-202ENST00000450650 XAGE3Q8WTP9 111 aa11.1□□□□□ -0.63
CAPN13-202ENST00000450650 DONSONQ9NYP3 566 aa11.1□□□□□ -0.63
CAPN13-202ENST00000450650 PAPPAQ13219 1627 aa11.1□□□□□ -0.63
CAPN13-202ENST00000450650 UBR2Q8IWV8 1755 aa11.1□□□□□ -0.63
CAPN13-202ENST00000450650 SRGAP3O43295 1099 aa11.1□□□□□ -0.63
CAPN13-202ENST00000450650 CDC45O75419 566 aa11.1□□□□□ -0.63
CAPN13-202ENST00000450650 CCDC173Q0VFZ6 552 aa11.1□□□□□ -0.63
CAPN13-202ENST00000450650 CWF19L2Q2TBE0 894 aaKnown RBP11.1□□□□□ -0.63
CAPN13-202ENST00000450650 TBC1D9Q6ZT07 1266 aa11.1□□□□□ -0.63
CAPN13-202ENST00000450650 COPS6Q7L5N1 327 aa11.1□□□□□ -0.63
CAPN13-202ENST00000450650 LRP10Q7Z4F1 713 aa11.1□□□□□ -0.63
CAPN13-202ENST00000450650 ZNF710Q8N1W2 664 aa11.1□□□□□ -0.63
CAPN13-202ENST00000450650 MTMR14Q8NCE2 650 aa11.1□□□□□ -0.63
CAPN13-202ENST00000450650 MORC4Q8TE76 937 aa11.1□□□□□ -0.63
CAPN13-202ENST00000450650 RBM28Q9NW13 759 aaKnown RBP11.1□□□□□ -0.63
CAPN13-202ENST00000450650 DISP2A7MBM2 1401 aa11.09□□□□□ -0.63
CAPN13-202ENST00000450650 TNNT3P45378 269 aaPredicted RBP11.09□□□□□ -0.63
CAPN13-202ENST00000450650 NEXNQ0ZGT2 675 aa11.09□□□□□ -0.63
CAPN13-202ENST00000450650 CTR9Q6PD62 1173 aa11.09□□□□□ -0.63
CAPN13-202ENST00000450650 HSCBQ8IWL3 235 aa11.09□□□□□ -0.63
CAPN13-202ENST00000450650 ZNF513Q8N8E2 541 aaPredicted RBP11.09□□□□□ -0.63
CAPN13-202ENST00000450650 OSBPL3Q9H4L5 887 aa11.09□□□□□ -0.63
CAPN13-202ENST00000450650 TBC1D2BQ9UPU7 963 aa11.09□□□□□ -0.63
CAPN13-202ENST00000450650 GNEQ9Y223 722 aaKnown RBP11.09□□□□□ -0.63
CAPN13-202ENST00000450650 KCPQ6ZWJ8 1503 aa11.09□□□□□ -0.63
CAPN13-202ENST00000450650 SF3A1Q15459 793 aaKnown RBP11.09□□□□□ -0.63
CAPN13-202ENST00000450650 CCDC96Q2M329 555 aa11.09□□□□□ -0.63
CAPN13-202ENST00000450650 JCADQ9P266 1359 aa11.09□□□□□ -0.63
CAPN13-202ENST00000450650 TNS2Q63HR2 1409 aa11.08□□□□□ -0.64
CAPN13-202ENST00000450650 GRM8O00222 908 aa11.08□□□□□ -0.64
CAPN13-202ENST00000450650 PDE1AP54750 535 aa11.08□□□□□ -0.64
CAPN13-202ENST00000450650 MTX1Q13505 466 aa11.08□□□□□ -0.64
CAPN13-202ENST00000450650 ANKRD13DQ6ZTN6 518 aa11.08□□□□□ -0.64
CAPN13-202ENST00000450650 METTL22Q9BUU2 404 aaPredicted RBP11.08□□□□□ -0.64
CAPN13-202ENST00000450650 SLKQ9H2G2 1235 aaPredicted RBP11.08□□□□□ -0.64
CAPN13-202ENST00000450650 PNMA2Q9UL42 364 aa11.08□□□□□ -0.64
CAPN13-202ENST00000450650 PLCH1Q4KWH8 1693 aa11.08□□□□□ -0.64
CAPN13-202ENST00000450650 TOGARAM1Q9Y4F4 1720 aa11.08□□□□□ -0.64
CAPN13-202ENST00000450650 UTYO14607 1347 aa11.08□□□□□ -0.64
CAPN13-202ENST00000450650 IGKV5-2P06315 115 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms