RNA–Protein interactions for RNA: ENST00000449159.5

SMPD4-211, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 635 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-211ENST00000449159 ANKRD18AQ8IVF6 992 aa13.33□□□□□ -0.28
SMPD4-211ENST00000449159 SMC1BQ8NDV3 1235 aa13.33□□□□□ -0.28
SMPD4-211ENST00000449159 CDC5LQ99459 802 aaKnown RBP13.33□□□□□ -0.28
SMPD4-211ENST00000449159 GNAI2P04899 355 aa13.32□□□□□ -0.28
SMPD4-211ENST00000449159 HTRA3P83110 453 aa13.32□□□□□ -0.28
SMPD4-211ENST00000449159 CCDC57Q2TAC2 916 aa13.32□□□□□ -0.28
SMPD4-211ENST00000449159 SP8Q8IXZ3 490 aa13.32□□□□□ -0.28
SMPD4-211ENST00000449159 JMYQ8N9B5 988 aa13.32□□□□□ -0.28
SMPD4-211ENST00000449159 KLHDC4Q8TBB5 520 aa13.32□□□□□ -0.28
SMPD4-211ENST00000449159 LMNB1P20700 586 aa13.31□□□□□ -0.28
SMPD4-211ENST00000449159 SOGA3Q5TF21 947 aa13.31□□□□□ -0.28
SMPD4-211ENST00000449159 TMC4Q7Z404 712 aa13.31□□□□□ -0.28
SMPD4-211ENST00000449159 SUPT16HQ9Y5B9 1047 aaKnown RBP13.31□□□□□ -0.28
SMPD4-211ENST00000449159 COL4A5P29400 1685 aa13.31□□□□□ -0.28
SMPD4-211ENST00000449159 IGHMBP2P38935 993 aaKnown RBP13.3□□□□□ -0.28
SMPD4-211ENST00000449159 RFX5P48382 616 aaPredicted RBP13.3□□□□□ -0.28
SMPD4-211ENST00000449159 GPSM2P81274 684 aa13.3□□□□□ -0.28
SMPD4-211ENST00000449159 CC2D2BQ6DHV5 1058 aa13.3□□□□□ -0.28
SMPD4-211ENST00000449159 PUS3Q9BZE2 481 aaKnown RBP13.3□□□□□ -0.28
SMPD4-211ENST00000449159 TAOK3Q9H2K8 898 aa13.3□□□□□ -0.28
SMPD4-211ENST00000449159 RRAGCQ9HB90 399 aa13.3□□□□□ -0.28
SMPD4-211ENST00000449159 BSDC1Q9NW68 430 aaPredicted RBP13.3□□□□□ -0.28
SMPD4-211ENST00000449159 DDX19BQ9UMR2 479 aa13.3□□□□□ -0.28
SMPD4-211ENST00000449159 LTBP3Q9NS15 1303 aa13.3□□□□□ -0.28
SMPD4-211ENST00000449159 PNMA6EA0A0J9YXQ4 647 aa13.29□□□□□ -0.28
SMPD4-211ENST00000449159 WTIPA6NIX2 430 aaPredicted RBP13.29□□□□□ -0.28
SMPD4-211ENST00000449159 FKBP4Q02790 459 aaKnown RBP eCLIP13.29□□□□□ -0.28
SMPD4-211ENST00000449159 TAF7LQ5H9L4 462 aa13.29□□□□□ -0.28
SMPD4-211ENST00000449159 RTKN2Q8IZC4 609 aa13.29□□□□□ -0.28
SMPD4-211ENST00000449159 GPR101Q96P66 508 aaPredicted RBP13.29□□□□□ -0.28
SMPD4-211ENST00000449159 MPHOSPH8Q99549 860 aa13.29□□□□□ -0.28
SMPD4-211ENST00000449159 ZNF277Q9NRM2 450 aaPredicted RBP13.29□□□□□ -0.28
SMPD4-211ENST00000449159 ZBTB40Q9NUA8 1239 aa13.29□□□□□ -0.28
SMPD4-211ENST00000449159 MINPP1Q9UNW1 487 aa13.29□□□□□ -0.28
SMPD4-211ENST00000449159 NSFL1CQ9UNZ2 370 aaKnown RBP13.29□□□□□ -0.28
SMPD4-211ENST00000449159 HDAC5Q9UQL6 1122 aa13.29□□□□□ -0.28
SMPD4-211ENST00000449159 SCN4AP35499 1836 aa13.29□□□□□ -0.28
SMPD4-211ENST00000449159 SRGAP3O43295 1099 aa13.28□□□□□ -0.28
SMPD4-211ENST00000449159 PTPN12Q05209 780 aaKnown RBP13.28□□□□□ -0.28
SMPD4-211ENST00000449159 MTX1Q13505 466 aa13.28□□□□□ -0.28
SMPD4-211ENST00000449159 LRRC24Q50LG9 513 aa13.28□□□□□ -0.28
SMPD4-211ENST00000449159 DPP8Q6V1X1 898 aaPredicted RBP13.28□□□□□ -0.28
SMPD4-211ENST00000449159 MPNDQ8N594 471 aa13.28□□□□□ -0.28
SMPD4-211ENST00000449159 CRBNQ96SW2 442 aa13.28□□□□□ -0.28
SMPD4-211ENST00000449159 PSMD1Q99460 953 aa13.28□□□□□ -0.28
SMPD4-211ENST00000449159 TMX4Q9H1E5 349 aaPredicted RBP13.28□□□□□ -0.28
SMPD4-211ENST00000449159 PA2G4Q9UQ80 394 aaKnown RBP13.28□□□□□ -0.28
SMPD4-211ENST00000449159 GLTPD2A6NH11 291 aa13.27□□□□□ -0.29
SMPD4-211ENST00000449159 LDHAL6AQ6ZMR3 332 aa13.27□□□□□ -0.29
SMPD4-211ENST00000449159 HELBQ8NG08 1087 aaPredicted RBP13.27□□□□□ -0.29
SMPD4-211ENST00000449159 CNNM1Q9NRU3 951 aa13.27□□□□□ -0.29
SMPD4-211ENST00000449159 ANKIB1Q9P2G1 1089 aa13.27□□□□□ -0.29
SMPD4-211ENST00000449159 POLLQ9UGP5 575 aa13.27□□□□□ -0.29
SMPD4-211ENST00000449159 SNAP23O00161 211 aa13.26□□□□□ -0.29
SMPD4-211ENST00000449159 UFL1O94874 794 aa13.26□□□□□ -0.29
SMPD4-211ENST00000449159 VEGFAP15692 232 aaPredicted RBP13.26□□□□□ -0.29
SMPD4-211ENST00000449159 XDHP47989 1333 aa13.26□□□□□ -0.29
SMPD4-211ENST00000449159 CHRNDQ07001 517 aa13.26□□□□□ -0.29
SMPD4-211ENST00000449159 GRIPAP1Q4V328 841 aa13.26□□□□□ -0.29
SMPD4-211ENST00000449159 CEP85Q6P2H3 762 aa13.26□□□□□ -0.29
SMPD4-211ENST00000449159 TBC1D16Q8TBP0 767 aa13.26□□□□□ -0.29
SMPD4-211ENST00000449159 RTFDC1Q9BY42 306 aaPredicted RBP13.26□□□□□ -0.29
SMPD4-211ENST00000449159 SIL1Q9H173 461 aa13.26□□□□□ -0.29
SMPD4-211ENST00000449159 PODXL2Q9NZ53 605 aa13.26□□□□□ -0.29
SMPD4-211ENST00000449159 RIPOR2Q9Y4F9 1068 aa13.26□□□□□ -0.29
SMPD4-211ENST00000449159 SCN9AQ15858 1988 aa13.25□□□□□ -0.29
SMPD4-211ENST00000449159 C6orf229H3BNL8 230 aa13.25□□□□□ -0.29
SMPD4-211ENST00000449159 TAF5LO75529 589 aa13.25□□□□□ -0.29
SMPD4-211ENST00000449159 IARSP41252 1262 aaKnown RBP13.25□□□□□ -0.29
SMPD4-211ENST00000449159 IRX6P78412 446 aaPredicted RBP13.25□□□□□ -0.29
SMPD4-211ENST00000449159 ATP8B2P98198 1209 aa13.25□□□□□ -0.29
SMPD4-211ENST00000449159 POLA2Q14181 598 aa13.25□□□□□ -0.29
SMPD4-211ENST00000449159 AOC3Q16853 763 aa13.25□□□□□ -0.29
SMPD4-211ENST00000449159 COL13A1Q5TAT6 717 aaPredicted RBP13.25□□□□□ -0.29
SMPD4-211ENST00000449159 ATG9AQ7Z3C6 839 aa13.25□□□□□ -0.29
SMPD4-211ENST00000449159 COPRSQ9NQ92 184 aa13.25□□□□□ -0.29
SMPD4-211ENST00000449159 EYA2O00167 538 aa13.24□□□□□ -0.29
SMPD4-211ENST00000449159 PPIP5K2O43314 1243 aa13.24□□□□□ -0.29
SMPD4-211ENST00000449159 KLRK1P26718 216 aa13.24□□□□□ -0.29
SMPD4-211ENST00000449159 SSH3Q8TE77 659 aa13.24□□□□□ -0.29
SMPD4-211ENST00000449159 ANKRD2Q9GZV1 360 aa13.24□□□□□ -0.29
SMPD4-211ENST00000449159 GGA1Q9UJY5 639 aa13.24□□□□□ -0.29
SMPD4-211ENST00000449159 ARAP2Q8WZ64 1704 aa13.23□□□□□ -0.29
SMPD4-211ENST00000449159 RIMBP2O15034 1052 aa13.23□□□□□ -0.29
SMPD4-211ENST00000449159 KIAA2012Q0VF49 1180 aa13.23□□□□□ -0.29
SMPD4-211ENST00000449159 SIRT2Q8IXJ6 389 aa13.23□□□□□ -0.29
SMPD4-211ENST00000449159 TNS4Q8IZW8 715 aa13.23□□□□□ -0.29
SMPD4-211ENST00000449159 LARGE2Q8N3Y3 721 aa13.23□□□□□ -0.29
SMPD4-211ENST00000449159 VGLL2Q8N8G2 317 aa13.23□□□□□ -0.29
SMPD4-211ENST00000449159 SUPT20HQ8NEM7 779 aa13.23□□□□□ -0.29
SMPD4-211ENST00000449159 ZNF646O15015 1829 aaPredicted RBP13.23□□□□□ -0.29
SMPD4-211ENST00000449159 PSME4Q14997 1843 aa13.23□□□□□ -0.29
SMPD4-211ENST00000449159 ADAMTSL1Q8N6G6 1762 aa13.22□□□□□ -0.29
SMPD4-211ENST00000449159 ZNF804BA4D1E1 1349 aa13.22□□□□□ -0.29
SMPD4-211ENST00000449159 MROH5Q6ZUA9 1318 aa13.22□□□□□ -0.29
SMPD4-211ENST00000449159 ATP2B4P23634 1241 aa13.22□□□□□ -0.29
SMPD4-211ENST00000449159 WASHC4Q2M389 1173 aa13.22□□□□□ -0.29
SMPD4-211ENST00000449159 METTL24Q5JXM2 366 aa13.22□□□□□ -0.29
SMPD4-211ENST00000449159 TXNRD3Q86VQ6 643 aa13.22□□□□□ -0.29
SMPD4-211ENST00000449159 EXOC6Q8TAG9 804 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms