RNA–Protein interactions for RNA: ENST00000448984.1

TRIM49C-201, Transcript of tripartite motif containing 49C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49C, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49C-201ENST00000448984 AXIN2Q9Y2T1 843 aa8.75□□□□□ -1.01
TRIM49C-201ENST00000448984 GSPT1P15170 499 aaKnown RBP8.75□□□□□ -1.01
TRIM49C-201ENST00000448984 LMAN1P49257 510 aa8.75□□□□□ -1.01
TRIM49C-201ENST00000448984 SMC1AQ14683 1233 aaKnown RBP8.75□□□□□ -1.01
TRIM49C-201ENST00000448984 E2F4Q16254 413 aa8.75□□□□□ -1.01
TRIM49C-201ENST00000448984 ERCC6LQ2NKX8 1250 aa8.75□□□□□ -1.01
TRIM49C-201ENST00000448984 ARHGAP29Q52LW3 1261 aa8.75□□□□□ -1.01
TRIM49C-201ENST00000448984 CCDC93Q567U6 631 aa8.75□□□□□ -1.01
TRIM49C-201ENST00000448984 TSHZ3Q63HK5 1081 aa8.75□□□□□ -1.01
TRIM49C-201ENST00000448984 MPRIPQ6WCQ1 1025 aa8.75□□□□□ -1.01
TRIM49C-201ENST00000448984 TDRD7Q8NHU6 1098 aaKnown RBP8.75□□□□□ -1.01
TRIM49C-201ENST00000448984 CABLES1Q8TDN4 633 aa8.75□□□□□ -1.01
TRIM49C-201ENST00000448984 SRRTQ9BXP5 876 aaKnown RBP8.75□□□□□ -1.01
TRIM49C-201ENST00000448984 PHAXQ9H814 394 aaKnown RBP8.75□□□□□ -1.01
TRIM49C-201ENST00000448984 RTL1A6NKG5 1358 aa8.75□□□□□ -1.01
TRIM49C-201ENST00000448984 TMEM94Q12767 1356 aa8.75□□□□□ -1.01
TRIM49C-201ENST00000448984 C1orf167Q5SNV9 1468 aa8.75□□□□□ -1.01
TRIM49C-201ENST00000448984 TUBGCP6Q96RT7 1819 aa8.74□□□□□ -1.01
TRIM49C-201ENST00000448984 CASTP20810 708 aaKnown RBP8.74□□□□□ -1.01
TRIM49C-201ENST00000448984 CCDC158Q5M9N0 1113 aa8.74□□□□□ -1.01
TRIM49C-201ENST00000448984 TTC22Q5TAA0 569 aa8.74□□□□□ -1.01
TRIM49C-201ENST00000448984 TADA2BQ86TJ2 420 aa8.74□□□□□ -1.01
TRIM49C-201ENST00000448984 CACTINQ8WUQ7 758 aaKnown RBP8.74□□□□□ -1.01
TRIM49C-201ENST00000448984 ORC3Q9UBD5 711 aaPredicted RBP8.74□□□□□ -1.01
TRIM49C-201ENST00000448984 LRRC37A3O60309 1634 aa8.74□□□□□ -1.01
TRIM49C-201ENST00000448984 MST1RQ04912 1400 aa8.74□□□□□ -1.01
TRIM49C-201ENST00000448984 A0A087WUV0 522 aaPredicted RBP8.73□□□□□ -1.01
TRIM49C-201ENST00000448984 SMC2O95347 1197 aa8.73□□□□□ -1.01
TRIM49C-201ENST00000448984 GCP02774 474 aa8.73□□□□□ -1.01
TRIM49C-201ENST00000448984 IRX1P78414 480 aaPredicted RBP8.73□□□□□ -1.01
TRIM49C-201ENST00000448984 PPP2R5AQ15172 486 aa8.73□□□□□ -1.01
TRIM49C-201ENST00000448984 CEP85Q6P2H3 762 aa8.73□□□□□ -1.01
TRIM49C-201ENST00000448984 ERC1Q8IUD2 1116 aa8.73□□□□□ -1.01
TRIM49C-201ENST00000448984 DNAAF4Q8WXU2 420 aa8.73□□□□□ -1.01
TRIM49C-201ENST00000448984 IP6K1Q92551 441 aa8.73□□□□□ -1.01
TRIM49C-201ENST00000448984 A1CFQ9NQ94 594 aaKnown RBP8.73□□□□□ -1.01
TRIM49C-201ENST00000448984 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.73□□□□□ -1.01
TRIM49C-201ENST00000448984 ATP6V1DQ9Y5K8 247 aa8.73□□□□□ -1.01
TRIM49C-201ENST00000448984 MAP3K5Q99683 1374 aa8.73□□□□□ -1.01
TRIM49C-201ENST00000448984 SLIT3O75094 1523 aa8.73□□□□□ -1.01
TRIM49C-201ENST00000448984 PRAMEF22A3QJZ6 481 aa8.73□□□□□ -1.01
TRIM49C-201ENST00000448984 TBC1D8O95759 1140 aa8.73□□□□□ -1.01
TRIM49C-201ENST00000448984 ERCC3P19447 782 aa8.73□□□□□ -1.01
TRIM49C-201ENST00000448984 GIMAP6Q6P9H5 292 aa8.73□□□□□ -1.01
TRIM49C-201ENST00000448984 CCAR2Q8N163 923 aaKnown RBP8.73□□□□□ -1.01
TRIM49C-201ENST00000448984 GDPD2Q9HCC8 539 aa8.73□□□□□ -1.01
TRIM49C-201ENST00000448984 CLIP2Q9UDT6 1046 aa8.73□□□□□ -1.01
TRIM49C-201ENST00000448984 ADAM21Q9UKJ8 722 aa8.73□□□□□ -1.01
TRIM49C-201ENST00000448984 ATP10DQ9P241 1426 aa8.73□□□□□ -1.01
TRIM49C-201ENST00000448984 KIAA0232Q92628 1395 aa8.72□□□□□ -1.01
TRIM49C-201ENST00000448984 KCNJ6P48051 423 aa8.72□□□□□ -1.01
TRIM49C-201ENST00000448984 EIF5P55010 431 aaKnown RBP8.72□□□□□ -1.01
TRIM49C-201ENST00000448984 SETQ01105 290 aaPredicted RBP8.72□□□□□ -1.01
TRIM49C-201ENST00000448984 LRRC8AQ8IWT6 810 aa8.72□□□□□ -1.01
TRIM49C-201ENST00000448984 MSL3Q8N5Y2 521 aaKnown RBP8.72□□□□□ -1.01
TRIM49C-201ENST00000448984 UBXN4Q92575 508 aa8.72□□□□□ -1.01
TRIM49C-201ENST00000448984 ITFG2Q969R8 447 aa8.72□□□□□ -1.01
TRIM49C-201ENST00000448984 TRIM5Q9C035 493 aa8.72□□□□□ -1.01
TRIM49C-201ENST00000448984 MED1Q15648 1581 aaPredicted RBP8.72□□□□□ -1.01
TRIM49C-201ENST00000448984 CRYBG1Q9Y4K1 1723 aa8.72□□□□□ -1.01
TRIM49C-201ENST00000448984 H0YHG0 523 aa8.72□□□□□ -1.01
TRIM49C-201ENST00000448984 CAVIN2O95810 425 aa8.72□□□□□ -1.01
TRIM49C-201ENST00000448984 SARNPP82979 210 aaKnown RBP8.72□□□□□ -1.01
TRIM49C-201ENST00000448984 FLIIQ13045 1269 aa8.72□□□□□ -1.01
TRIM49C-201ENST00000448984 ZNF530Q6P9A1 599 aaPredicted RBP8.72□□□□□ -1.01
TRIM49C-201ENST00000448984 SARM1Q6SZW1 724 aa8.72□□□□□ -1.01
TRIM49C-201ENST00000448984 KRT28Q7Z3Y7 464 aa8.72□□□□□ -1.01
TRIM49C-201ENST00000448984 PLEKHM2Q8IWE5 1019 aa8.72□□□□□ -1.01
TRIM49C-201ENST00000448984 FAM210AQ96ND0 272 aa8.72□□□□□ -1.01
TRIM49C-201ENST00000448984 SRCIN1Q9C0H9 1055 aa8.72□□□□□ -1.01
TRIM49C-201ENST00000448984 USP27XA6NNY8 438 aa8.71□□□□□ -1.01
TRIM49C-201ENST00000448984 ANAPC15P60006 121 aa8.71□□□□□ -1.01
TRIM49C-201ENST00000448984 BIRC2Q13490 618 aa8.71□□□□□ -1.01
TRIM49C-201ENST00000448984 SNW1Q13573 536 aaKnown RBP8.71□□□□□ -1.01
TRIM49C-201ENST00000448984 TAF7Q15545 349 aaPredicted RBP8.71□□□□□ -1.01
TRIM49C-201ENST00000448984 MAP3K11Q16584 847 aa8.71□□□□□ -1.01
TRIM49C-201ENST00000448984 CC2D1AQ6P1N0 951 aaPredicted RBP8.71□□□□□ -1.01
TRIM49C-201ENST00000448984 ANKRD44Q8N8A2 993 aa8.71□□□□□ -1.01
TRIM49C-201ENST00000448984 IL17RAQ96F46 866 aa8.71□□□□□ -1.01
TRIM49C-201ENST00000448984 MRFAP1L1Q96HT8 127 aa8.71□□□□□ -1.01
TRIM49C-201ENST00000448984 C19orf44Q9H6X5 657 aa8.71□□□□□ -1.01
TRIM49C-201ENST00000448984 NRBP1Q9UHY1 535 aa8.71□□□□□ -1.01
TRIM49C-201ENST00000448984 CNPY2Q9Y2B0 182 aa8.71□□□□□ -1.01
TRIM49C-201ENST00000448984 MRVI1Q9Y6F6 885 aa8.71□□□□□ -1.01
TRIM49C-201ENST00000448984 KIF24Q5T7B8 1368 aa8.71□□□□□ -1.02
TRIM49C-201ENST00000448984 PXDNQ92626 1479 aa8.71□□□□□ -1.02
TRIM49C-201ENST00000448984 PNMA6EA0A0J9YXQ4 647 aa8.71□□□□□ -1.02
TRIM49C-201ENST00000448984 EFCAB8A8MWE9 144 aa8.71□□□□□ -1.02
TRIM49C-201ENST00000448984 TYRO3Q06418 890 aa8.71□□□□□ -1.02
TRIM49C-201ENST00000448984 DHX8Q14562 1220 aaKnown RBP8.71□□□□□ -1.02
TRIM49C-201ENST00000448984 CHRNA2Q15822 529 aa8.71□□□□□ -1.02
TRIM49C-201ENST00000448984 ANKRD24Q8TF21 1146 aa8.71□□□□□ -1.02
TRIM49C-201ENST00000448984 FAM212AQ96EL1 285 aa8.71□□□□□ -1.02
TRIM49C-201ENST00000448984 UTP14AQ9BVJ6 771 aaKnown RBP8.71□□□□□ -1.02
TRIM49C-201ENST00000448984 STK31Q9BXU1 1019 aa8.71□□□□□ -1.02
TRIM49C-201ENST00000448984 NBPF3Q9H094 633 aa8.71□□□□□ -1.02
TRIM49C-201ENST00000448984 DCTPP1Q9H773 170 aa8.71□□□□□ -1.02
TRIM49C-201ENST00000448984 PHLPP2Q6ZVD8 1323 aa8.7□□□□□ -1.02
TRIM49C-201ENST00000448984 ERC2O15083 957 aa8.7□□□□□ -1.02
TRIM49C-201ENST00000448984 TADA3O75528 432 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms