RNA–Protein interactions for RNA: ENST00000447394.1

HLA-DOB-207, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-207ENST00000447394 HELBQ8NG08 1087 aaPredicted RBP16.57■□□□□ 0.24
HLA-DOB-207ENST00000447394 EXOC6Q8TAG9 804 aa16.57■□□□□ 0.24
HLA-DOB-207ENST00000447394 SIL1Q9H173 461 aa16.57■□□□□ 0.24
HLA-DOB-207ENST00000447394 MINPP1Q9UNW1 487 aa16.57■□□□□ 0.24
HLA-DOB-207ENST00000447394 GRIN3BO60391 1043 aa16.56■□□□□ 0.24
HLA-DOB-207ENST00000447394 PTPN12Q05209 780 aaKnown RBP16.56■□□□□ 0.24
HLA-DOB-207ENST00000447394 MPHOSPH8Q99549 860 aa16.56■□□□□ 0.24
HLA-DOB-207ENST00000447394 ZNF277Q9NRM2 450 aaPredicted RBP16.56■□□□□ 0.24
HLA-DOB-207ENST00000447394 BSDC1Q9NW68 430 aaPredicted RBP16.56■□□□□ 0.24
HLA-DOB-207ENST00000447394 SNAP23O00161 211 aa16.55■□□□□ 0.24
HLA-DOB-207ENST00000447394 CHRNDQ07001 517 aa16.55■□□□□ 0.24
HLA-DOB-207ENST00000447394 SOGA3Q5TF21 947 aa16.55■□□□□ 0.24
HLA-DOB-207ENST00000447394 DPP8Q6V1X1 898 aaPredicted RBP16.55■□□□□ 0.24
HLA-DOB-207ENST00000447394 LDHAL6AQ6ZMR3 332 aa16.55■□□□□ 0.24
HLA-DOB-207ENST00000447394 TAOK3Q9H2K8 898 aa16.55■□□□□ 0.24
HLA-DOB-207ENST00000447394 CNNM1Q9NRU3 951 aa16.55■□□□□ 0.24
HLA-DOB-207ENST00000447394 NSFL1CQ9UNZ2 370 aaKnown RBP16.55■□□□□ 0.24
HLA-DOB-207ENST00000447394 HDAC5Q9UQL6 1122 aa16.55■□□□□ 0.24
HLA-DOB-207ENST00000447394 ARAP2Q8WZ64 1704 aa16.54■□□□□ 0.24
HLA-DOB-207ENST00000447394 DCAF8L1A6NGE4 600 aa16.54■□□□□ 0.24
HLA-DOB-207ENST00000447394 TAF5LO75529 589 aa16.54■□□□□ 0.24
HLA-DOB-207ENST00000447394 ATP8B2P98198 1209 aa16.54■□□□□ 0.24
HLA-DOB-207ENST00000447394 FKBP4Q02790 459 aaKnown RBP eCLIP16.54■□□□□ 0.24
HLA-DOB-207ENST00000447394 POLA2Q14181 598 aa16.54■□□□□ 0.24
HLA-DOB-207ENST00000447394 TMC4Q7Z404 712 aa16.54■□□□□ 0.24
HLA-DOB-207ENST00000447394 SIRT2Q8IXJ6 389 aa16.54■□□□□ 0.24
HLA-DOB-207ENST00000447394 MPNDQ8N594 471 aa16.54■□□□□ 0.24
HLA-DOB-207ENST00000447394 ANKIB1Q9P2G1 1089 aa16.54■□□□□ 0.24
HLA-DOB-207ENST00000447394 POLLQ9UGP5 575 aa16.54■□□□□ 0.24
HLA-DOB-207ENST00000447394 CENPBP07199 599 aaPredicted RBP16.53■□□□□ 0.24
HLA-DOB-207ENST00000447394 KLRK1P26718 216 aa16.53■□□□□ 0.24
HLA-DOB-207ENST00000447394 ATG9AQ7Z3C6 839 aa16.53■□□□□ 0.24
HLA-DOB-207ENST00000447394 RTKN2Q8IZC4 609 aa16.53■□□□□ 0.24
HLA-DOB-207ENST00000447394 ZNF646O15015 1829 aaPredicted RBP16.53■□□□□ 0.24
HLA-DOB-207ENST00000447394 SCN9AQ15858 1988 aa16.53■□□□□ 0.24
HLA-DOB-207ENST00000447394 XDHP47989 1333 aa16.52■□□□□ 0.24
HLA-DOB-207ENST00000447394 LTBP3Q9NS15 1303 aa16.52■□□□□ 0.24
HLA-DOB-207ENST00000447394 UFL1O94874 794 aa16.52■□□□□ 0.24
HLA-DOB-207ENST00000447394 AOC3Q16853 763 aa16.52■□□□□ 0.24
HLA-DOB-207ENST00000447394 CC2D2BQ6DHV5 1058 aa16.52■□□□□ 0.24
HLA-DOB-207ENST00000447394 TBC1D16Q8TBP0 767 aa16.52■□□□□ 0.24
HLA-DOB-207ENST00000447394 SSH3Q8TE77 659 aa16.52■□□□□ 0.24
HLA-DOB-207ENST00000447394 TMX4Q9H1E5 349 aaPredicted RBP16.52■□□□□ 0.24
HLA-DOB-207ENST00000447394 RIPOR2Q9Y4F9 1068 aa16.52■□□□□ 0.24
HLA-DOB-207ENST00000447394 PCDHB15Q9Y5E8 787 aa16.52■□□□□ 0.24
HLA-DOB-207ENST00000447394 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.52■□□□□ 0.24
HLA-DOB-207ENST00000447394 C6orf229H3BNL8 230 aa16.51■□□□□ 0.23
HLA-DOB-207ENST00000447394 EYA2O00167 538 aa16.51■□□□□ 0.23
HLA-DOB-207ENST00000447394 RIMBP2O15034 1052 aa16.51■□□□□ 0.23
HLA-DOB-207ENST00000447394 C9orf131Q5VYM1 1079 aa16.51■□□□□ 0.23
HLA-DOB-207ENST00000447394 PSMD1Q99460 953 aa16.51■□□□□ 0.23
HLA-DOB-207ENST00000447394 COPRSQ9NQ92 184 aa16.51■□□□□ 0.23
HLA-DOB-207ENST00000447394 PODXL2Q9NZ53 605 aa16.51■□□□□ 0.23
HLA-DOB-207ENST00000447394 RNF181Q9P0P0 153 aa16.51■□□□□ 0.23
HLA-DOB-207ENST00000447394 MYH13Q9UKX3 1938 aa16.51■□□□□ 0.23
HLA-DOB-207ENST00000447394 PSME4Q14997 1843 aa16.5■□□□□ 0.23
HLA-DOB-207ENST00000447394 METTL24Q5JXM2 366 aa16.5■□□□□ 0.23
HLA-DOB-207ENST00000447394 VGLL2Q8N8G2 317 aa16.5■□□□□ 0.23
HLA-DOB-207ENST00000447394 RTFDC1Q9BY42 306 aaPredicted RBP16.5■□□□□ 0.23
HLA-DOB-207ENST00000447394 GGA1Q9UJY5 639 aa16.5■□□□□ 0.23
HLA-DOB-207ENST00000447394 PPIP5K2O43314 1243 aa16.49■□□□□ 0.23
HLA-DOB-207ENST00000447394 LMNB1P20700 586 aa16.49■□□□□ 0.23
HLA-DOB-207ENST00000447394 IARSP41252 1262 aaKnown RBP16.49■□□□□ 0.23
HLA-DOB-207ENST00000447394 TXNRD3Q86VQ6 643 aa16.49■□□□□ 0.23
HLA-DOB-207ENST00000447394 CHMP4BQ9H444 224 aaKnown RBP16.49■□□□□ 0.23
HLA-DOB-207ENST00000447394 EXOC6BQ9Y2D4 811 aa16.49■□□□□ 0.23
HLA-DOB-207ENST00000447394 MROH5Q6ZUA9 1318 aa16.48■□□□□ 0.23
HLA-DOB-207ENST00000447394 CIAO1O76071 339 aa16.48■□□□□ 0.23
HLA-DOB-207ENST00000447394 RPAP2Q8IXW5 612 aaPredicted RBP16.48■□□□□ 0.23
HLA-DOB-207ENST00000447394 ANKRD2Q9GZV1 360 aa16.48■□□□□ 0.23
HLA-DOB-207ENST00000447394 ZNF804BA4D1E1 1349 aa16.47■□□□□ 0.23
HLA-DOB-207ENST00000447394 IRS2Q9Y4H2 1338 aa16.47■□□□□ 0.23
HLA-DOB-207ENST00000447394 SURF6O75683 361 aaKnown RBP16.47■□□□□ 0.23
HLA-DOB-207ENST00000447394 ATP2B4P23634 1241 aa16.47■□□□□ 0.23
HLA-DOB-207ENST00000447394 KCNJ4P48050 445 aa16.47■□□□□ 0.23
HLA-DOB-207ENST00000447394 TFCP2Q12800 502 aa16.47■□□□□ 0.23
HLA-DOB-207ENST00000447394 DOK7Q18PE1 504 aa16.47■□□□□ 0.23
HLA-DOB-207ENST00000447394 GRIPAP1Q4V328 841 aa16.47■□□□□ 0.23
HLA-DOB-207ENST00000447394 LARGE2Q8N3Y3 721 aa16.47■□□□□ 0.23
HLA-DOB-207ENST00000447394 ZNF609O15014 1411 aa16.46■□□□□ 0.23
HLA-DOB-207ENST00000447394 APBB1O00213 710 aa16.46■□□□□ 0.23
HLA-DOB-207ENST00000447394 SASH1O94885 1247 aa16.46■□□□□ 0.23
HLA-DOB-207ENST00000447394 KIAA2012Q0VF49 1180 aa16.46■□□□□ 0.23
HLA-DOB-207ENST00000447394 WASHC4Q2M389 1173 aa16.46■□□□□ 0.23
HLA-DOB-207ENST00000447394 SUPT20HQ8NEM7 779 aa16.46■□□□□ 0.23
HLA-DOB-207ENST00000447394 DBNDD1Q9H9R9 158 aa16.46■□□□□ 0.23
HLA-DOB-207ENST00000447394 MED23Q9ULK4 1368 aa16.46■□□□□ 0.23
HLA-DOB-207ENST00000447394 ZNF541Q9H0D2 1346 aa16.45■□□□□ 0.22
HLA-DOB-207ENST00000447394 PDE8BO95263 885 aa16.45■□□□□ 0.22
HLA-DOB-207ENST00000447394 IL15P40933 162 aaPredicted RBP16.45■□□□□ 0.22
HLA-DOB-207ENST00000447394 G3BP1Q13283 466 aaKnown RBP eCLIP16.45■□□□□ 0.22
HLA-DOB-207ENST00000447394 OS9Q13438 667 aaPredicted RBP16.45■□□□□ 0.22
HLA-DOB-207ENST00000447394 LEMD3Q9Y2U8 911 aa16.45■□□□□ 0.22
HLA-DOB-207ENST00000447394 EYA3Q99504 573 aa16.44■□□□□ 0.22
HLA-DOB-207ENST00000447394 NOP58Q9Y2X3 529 aaKnown RBP16.44■□□□□ 0.22
HLA-DOB-207ENST00000447394 YDJCA8MPS7 323 aa16.43■□□□□ 0.22
HLA-DOB-207ENST00000447394 ECE2O60344 883 aa16.43■□□□□ 0.22
HLA-DOB-207ENST00000447394 HMMRO75330 724 aa16.43■□□□□ 0.22
HLA-DOB-207ENST00000447394 FGFR2P21802 821 aa16.43■□□□□ 0.22
HLA-DOB-207ENST00000447394 ADORA1P30542 326 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms