RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 C7orf43Q8WVR3 580 aa11.77□□□□□ -0.53
SMARCE1-206ENST00000447024 GPC6Q9Y625 555 aaPredicted RBP11.77□□□□□ -0.53
SMARCE1-206ENST00000447024 DEPDC5O75140 1603 aa11.77□□□□□ -0.53
SMARCE1-206ENST00000447024 TNRQ92752 1358 aa11.77□□□□□ -0.53
SMARCE1-206ENST00000447024 NLRP1Q9C000 1473 aa11.76□□□□□ -0.53
SMARCE1-206ENST00000447024 MROH1Q8NDA8 1641 aa11.76□□□□□ -0.53
SMARCE1-206ENST00000447024 PTPRTO14522 1441 aa11.76□□□□□ -0.53
SMARCE1-206ENST00000447024 A2ML1A8K2U0 1454 aa11.76□□□□□ -0.53
SMARCE1-206ENST00000447024 PLA2R1Q13018 1463 aa11.76□□□□□ -0.53
SMARCE1-206ENST00000447024 ADARB2-AS1A8MUL3 147 aa11.75□□□□□ -0.53
SMARCE1-206ENST00000447024 SFSWAPQ12872 951 aaKnown RBP11.75□□□□□ -0.53
SMARCE1-206ENST00000447024 SLC30A3Q99726 388 aa11.75□□□□□ -0.53
SMARCE1-206ENST00000447024 NEUROD4Q9HD90 331 aa11.75□□□□□ -0.53
SMARCE1-206ENST00000447024 RRBP1Q9P2E9 1410 aaKnown RBP11.75□□□□□ -0.53
SMARCE1-206ENST00000447024 ANKRD50Q9ULJ7 1429 aa11.75□□□□□ -0.53
SMARCE1-206ENST00000447024 LMTK2Q8IWU2 1503 aa11.75□□□□□ -0.53
SMARCE1-206ENST00000447024 CEP170BQ9Y4F5 1589 aaPredicted RBP11.75□□□□□ -0.53
SMARCE1-206ENST00000447024 MYO3AQ8NEV4 1616 aa11.75□□□□□ -0.53
SMARCE1-206ENST00000447024 SERTM1A2A2V5 107 aa11.74□□□□□ -0.53
SMARCE1-206ENST00000447024 SPDYE3A6NKU9 549 aa11.74□□□□□ -0.53
SMARCE1-206ENST00000447024 TNFRSF25Q93038 417 aa11.74□□□□□ -0.53
SMARCE1-206ENST00000447024 M0R082 166 aa11.73□□□□□ -0.53
SMARCE1-206ENST00000447024 PRRT3Q5FWE3 981 aa11.73□□□□□ -0.53
SMARCE1-206ENST00000447024 SPATA31D1Q6ZQQ2 1576 aa11.73□□□□□ -0.53
SMARCE1-206ENST00000447024 VWDEQ8N2E2 1590 aa11.73□□□□□ -0.53
SMARCE1-206ENST00000447024 ZNF417Q8TAU3 575 aa11.73□□□□□ -0.53
SMARCE1-206ENST00000447024 RHPN1Q8TCX5 695 aa11.73□□□□□ -0.53
SMARCE1-206ENST00000447024 ZNF587Q96SQ5 575 aaPredicted RBP11.73□□□□□ -0.53
SMARCE1-206ENST00000447024 STRCQ7RTU9 1775 aa11.72□□□□□ -0.53
SMARCE1-206ENST00000447024 THEMISQ8N1K5 641 aaPredicted RBP11.72□□□□□ -0.53
SMARCE1-206ENST00000447024 POM121Q96HA1 1249 aa11.72□□□□□ -0.53
SMARCE1-206ENST00000447024 KIAA1024Q9UPX6 916 aa11.72□□□□□ -0.53
SMARCE1-206ENST00000447024 CAMSAP1Q5T5Y3 1602 aa11.71□□□□□ -0.53
SMARCE1-206ENST00000447024 ERVK-7P63135 1459 aa11.71□□□□□ -0.53
SMARCE1-206ENST00000447024 ALBP02768 609 aa11.71□□□□□ -0.53
SMARCE1-206ENST00000447024 COL9A3Q14050 684 aaPredicted RBP11.71□□□□□ -0.53
SMARCE1-206ENST00000447024 WWC1Q8IX03 1113 aa11.71□□□□□ -0.53
SMARCE1-206ENST00000447024 TPCN2Q8NHX9 752 aa11.71□□□□□ -0.53
SMARCE1-206ENST00000447024 STARD13Q9Y3M8 1113 aa11.71□□□□□ -0.53
SMARCE1-206ENST00000447024 SPEM2Q0P670 501 aa11.7□□□□□ -0.54
SMARCE1-206ENST00000447024 RAB44Q7Z6P3 723 aaPredicted RBP11.7□□□□□ -0.54
SMARCE1-206ENST00000447024 TRIM50Q86XT4 487 aa11.7□□□□□ -0.54
SMARCE1-206ENST00000447024 PRDM6Q9NQX0 595 aa11.7□□□□□ -0.54
SMARCE1-206ENST00000447024 RPRD2Q5VT52 1461 aaKnown RBP11.7□□□□□ -0.54
SMARCE1-206ENST00000447024 CEP152O94986 1710 aa11.69□□□□□ -0.54
SMARCE1-206ENST00000447024 FAM229AH3BQW9 127 aa11.69□□□□□ -0.54
SMARCE1-206ENST00000447024 ZBTB7BO15156 539 aaPredicted RBP11.69□□□□□ -0.54
SMARCE1-206ENST00000447024 APBA3O96018 575 aa11.69□□□□□ -0.54
SMARCE1-206ENST00000447024 PSMA6P60900 246 aaKnown RBP11.69□□□□□ -0.54
SMARCE1-206ENST00000447024 RSPO4Q2I0M5 234 aaPredicted RBP11.69□□□□□ -0.54
SMARCE1-206ENST00000447024 C8orf86Q6ZUL3 223 aa11.69□□□□□ -0.54
SMARCE1-206ENST00000447024 HSH2DQ96JZ2 352 aa11.69□□□□□ -0.54
SMARCE1-206ENST00000447024 TSPAN10Q9H1Z9 355 aaPredicted RBP11.69□□□□□ -0.54
SMARCE1-206ENST00000447024 BRD7Q9NPI1 651 aa11.69□□□□□ -0.54
SMARCE1-206ENST00000447024 ADH7P40394 386 aa11.68□□□□□ -0.54
SMARCE1-206ENST00000447024 ZMYM1Q5SVZ6 1142 aa11.68□□□□□ -0.54
SMARCE1-206ENST00000447024 MICALL1Q8N3F8 863 aa11.68□□□□□ -0.54
SMARCE1-206ENST00000447024 KRTAP4-8Q9BYQ9 185 aa11.68□□□□□ -0.54
SMARCE1-206ENST00000447024 UGGT1Q9NYU2 1555 aa11.67□□□□□ -0.54
SMARCE1-206ENST00000447024 CLDN10P78369 228 aa11.67□□□□□ -0.54
SMARCE1-206ENST00000447024 NKAPLQ5M9Q1 402 aa11.67□□□□□ -0.54
SMARCE1-206ENST00000447024 C1orf53Q5VUE5 145 aa11.67□□□□□ -0.54
SMARCE1-206ENST00000447024 CCDC102BQ68D86 513 aa11.67□□□□□ -0.54
SMARCE1-206ENST00000447024 PLEKHM2Q8IWE5 1019 aa11.67□□□□□ -0.54
SMARCE1-206ENST00000447024 ADAMTS19Q8TE59 1207 aa11.67□□□□□ -0.54
SMARCE1-206ENST00000447024 TPSG1Q9NRR2 321 aa11.67□□□□□ -0.54
SMARCE1-206ENST00000447024 UNC13BO14795 1591 aa11.67□□□□□ -0.54
SMARCE1-206ENST00000447024 EFCAB6Q5THR3 1501 aa11.66□□□□□ -0.54
SMARCE1-206ENST00000447024 USP17L3A6NCW0 530 aa11.66□□□□□ -0.54
SMARCE1-206ENST00000447024 USP17L4A6NCW7 530 aa11.66□□□□□ -0.54
SMARCE1-206ENST00000447024 ATP1A2P50993 1020 aa11.66□□□□□ -0.54
SMARCE1-206ENST00000447024 HIRAP54198 1017 aaPredicted RBP11.66□□□□□ -0.54
SMARCE1-206ENST00000447024 NEUROD1Q13562 356 aa11.66□□□□□ -0.54
SMARCE1-206ENST00000447024 USP17L2Q6R6M4 530 aa11.66□□□□□ -0.54
SMARCE1-206ENST00000447024 POTEAQ6S8J7 498 aa11.66□□□□□ -0.54
SMARCE1-206ENST00000447024 USP17L1Q7RTZ2 530 aa11.66□□□□□ -0.54
SMARCE1-206ENST00000447024 ANKLE2Q86XL3 938 aa11.66□□□□□ -0.54
SMARCE1-206ENST00000447024 CEP63Q96MT8 703 aa11.66□□□□□ -0.54
SMARCE1-206ENST00000447024 PHACTR1Q9C0D0 580 aa11.66□□□□□ -0.54
SMARCE1-206ENST00000447024 SLC52A1Q9NWF4 448 aa11.66□□□□□ -0.54
SMARCE1-206ENST00000447024 HCN4Q9Y3Q4 1203 aa11.66□□□□□ -0.54
SMARCE1-206ENST00000447024 ACIN1Q9UKV3 1341 aaKnown RBP11.65□□□□□ -0.54
SMARCE1-206ENST00000447024 CFAP65Q6ZU64 1925 aaKnown RBP11.65□□□□□ -0.54
SMARCE1-206ENST00000447024 POM121CA8CG34 1229 aa11.65□□□□□ -0.54
SMARCE1-206ENST00000447024 NID1P14543 1247 aa11.65□□□□□ -0.54
SMARCE1-206ENST00000447024 TYRO3Q06418 890 aa11.65□□□□□ -0.54
SMARCE1-206ENST00000447024 FBXO41Q8TF61 875 aa11.65□□□□□ -0.54
SMARCE1-206ENST00000447024 CHMP3Q9Y3E7 222 aa11.65□□□□□ -0.54
SMARCE1-206ENST00000447024 NOS1P29475 1434 aa11.65□□□□□ -0.54
SMARCE1-206ENST00000447024 TET3O43151 1660 aa11.65□□□□□ -0.55
SMARCE1-206ENST00000447024 KDM5AP29375 1690 aaKnown RBP11.65□□□□□ -0.55
SMARCE1-206ENST00000447024 MED14O60244 1454 aa11.64□□□□□ -0.55
SMARCE1-206ENST00000447024 KCNQ4P56696 695 aa11.64□□□□□ -0.55
SMARCE1-206ENST00000447024 TRIM28Q13263 835 aaKnown RBP11.64□□□□□ -0.55
SMARCE1-206ENST00000447024 UCN2Q96RP3 112 aa11.64□□□□□ -0.55
SMARCE1-206ENST00000447024 ANKIB1Q9P2G1 1089 aa11.64□□□□□ -0.55
SMARCE1-206ENST00000447024 SFI1A8K8P3 1242 aa11.63□□□□□ -0.55
SMARCE1-206ENST00000447024 ITGAEP38570 1179 aa11.63□□□□□ -0.55
SMARCE1-206ENST00000447024 ZNF280CQ8ND82 737 aa11.63□□□□□ -0.55
SMARCE1-206ENST00000447024 NACC1Q96RE7 527 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms