RNA–Protein interactions for RNA: ENST00000446739.1

PHTF1-207, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 4

Gene PHTF1, Length 770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-207ENST00000446739 NSFL1CQ9UNZ2 370 aaKnown RBP22.79■■□□□ 1.24
PHTF1-207ENST00000446739 DUOX1Q9NRD9 1551 aa22.79■■□□□ 1.24
PHTF1-207ENST00000446739 PRELPP51888 382 aa22.78■■□□□ 1.24
PHTF1-207ENST00000446739 GPSM2P81274 684 aa22.78■■□□□ 1.24
PHTF1-207ENST00000446739 C20orf194Q5TEA3 1177 aa22.78■■□□□ 1.24
PHTF1-207ENST00000446739 CHMP4BQ9H444 224 aaKnown RBP22.78■■□□□ 1.24
PHTF1-207ENST00000446739 ZNF277Q9NRM2 450 aaPredicted RBP22.78■■□□□ 1.24
PHTF1-207ENST00000446739 PODXL2Q9NZ53 605 aa22.78■■□□□ 1.24
PHTF1-207ENST00000446739 MINPP1Q9UNW1 487 aa22.78■■□□□ 1.24
PHTF1-207ENST00000446739 XDHP47989 1333 aa22.78■■□□□ 1.24
PHTF1-207ENST00000446739 MTX1Q13505 466 aa22.77■■□□□ 1.24
PHTF1-207ENST00000446739 LDHAL6AQ6ZMR3 332 aa22.77■■□□□ 1.24
PHTF1-207ENST00000446739 ZNF594Q96JF6 807 aaPredicted RBP22.77■■□□□ 1.24
PHTF1-207ENST00000446739 VPS33BQ9H267 617 aa22.77■■□□□ 1.24
PHTF1-207ENST00000446739 ANKIB1Q9P2G1 1089 aa22.77■■□□□ 1.24
PHTF1-207ENST00000446739 IARSP41252 1262 aaKnown RBP22.76■■□□□ 1.23
PHTF1-207ENST00000446739 ANKRD2Q9GZV1 360 aa22.76■■□□□ 1.23
PHTF1-207ENST00000446739 RFX5P48382 616 aaPredicted RBP22.75■■□□□ 1.23
PHTF1-207ENST00000446739 CNNM1Q9NRU3 951 aa22.75■■□□□ 1.23
PHTF1-207ENST00000446739 ZC3H4Q9UPT8 1303 aaKnown RBP22.75■■□□□ 1.23
PHTF1-207ENST00000446739 ATP2B4P23634 1241 aa22.74■■□□□ 1.23
PHTF1-207ENST00000446739 TBC1D16Q8TBP0 767 aa22.74■■□□□ 1.23
PHTF1-207ENST00000446739 GGA1Q9UJY5 639 aa22.74■■□□□ 1.23
PHTF1-207ENST00000446739 C6orf229H3BNL8 230 aa22.73■■□□□ 1.23
PHTF1-207ENST00000446739 SRGAP3O43295 1099 aa22.73■■□□□ 1.23
PHTF1-207ENST00000446739 YY1P25490 414 aa22.73■■□□□ 1.23
PHTF1-207ENST00000446739 CHRNDQ07001 517 aa22.73■■□□□ 1.23
PHTF1-207ENST00000446739 EYA3Q99504 573 aa22.73■■□□□ 1.23
PHTF1-207ENST00000446739 POLLQ9UGP5 575 aa22.73■■□□□ 1.23
PHTF1-207ENST00000446739 PPIP5K2O43314 1243 aa22.72■■□□□ 1.23
PHTF1-207ENST00000446739 UFL1O94874 794 aa22.72■■□□□ 1.23
PHTF1-207ENST00000446739 PTPN12Q05209 780 aaKnown RBP22.72■■□□□ 1.23
PHTF1-207ENST00000446739 LARGE2Q8N3Y3 721 aa22.72■■□□□ 1.23
PHTF1-207ENST00000446739 C1orf115Q9H7X2 142 aa22.72■■□□□ 1.23
PHTF1-207ENST00000446739 FBXO3Q9UK99 471 aa22.72■■□□□ 1.23
PHTF1-207ENST00000446739 LEMD3Q9Y2U8 911 aa22.72■■□□□ 1.23
PHTF1-207ENST00000446739 KIAA2012Q0VF49 1180 aa22.71■■□□□ 1.23
PHTF1-207ENST00000446739 AOC3Q16853 763 aa22.71■■□□□ 1.23
PHTF1-207ENST00000446739 KLHDC4Q8TBB5 520 aa22.71■■□□□ 1.23
PHTF1-207ENST00000446739 PUS3Q9BZE2 481 aaKnown RBP22.71■■□□□ 1.23
PHTF1-207ENST00000446739 ZBTB40Q9NUA8 1239 aa22.71■■□□□ 1.23
PHTF1-207ENST00000446739 RIPOR2Q9Y4F9 1068 aa22.71■■□□□ 1.23
PHTF1-207ENST00000446739 WASHC4Q2M389 1173 aa22.7■■□□□ 1.22
PHTF1-207ENST00000446739 JDP2Q8WYK2 163 aa22.7■■□□□ 1.22
PHTF1-207ENST00000446739 COPRSQ9NQ92 184 aa22.7■■□□□ 1.22
PHTF1-207ENST00000446739 MROH5Q6ZUA9 1318 aa22.7■■□□□ 1.22
PHTF1-207ENST00000446739 EYA2O00167 538 aa22.69■■□□□ 1.22
PHTF1-207ENST00000446739 ATP8B2P98198 1209 aa22.69■■□□□ 1.22
PHTF1-207ENST00000446739 COL4A5P29400 1685 aa22.68■■□□□ 1.22
PHTF1-207ENST00000446739 ZNF804BA4D1E1 1349 aa22.68■■□□□ 1.22
PHTF1-207ENST00000446739 PNMA6EA0A0J9YXQ4 647 aa22.68■■□□□ 1.22
PHTF1-207ENST00000446739 CIAO1O76071 339 aa22.68■■□□□ 1.22
PHTF1-207ENST00000446739 LRRC24Q50LG9 513 aa22.68■■□□□ 1.22
PHTF1-207ENST00000446739 NIM1KQ8IY84 436 aa22.68■■□□□ 1.22
PHTF1-207ENST00000446739 ZC3H12CQ9C0D7 883 aaKnown RBP22.68■■□□□ 1.22
PHTF1-207ENST00000446739 KCNJ4P48050 445 aa22.67■■□□□ 1.22
PHTF1-207ENST00000446739 POLA2Q14181 598 aa22.67■■□□□ 1.22
PHTF1-207ENST00000446739 CEP85Q6P2H3 762 aa22.67■■□□□ 1.22
PHTF1-207ENST00000446739 HELBQ8NG08 1087 aaPredicted RBP22.67■■□□□ 1.22
PHTF1-207ENST00000446739 SUPT16HQ9Y5B9 1047 aaKnown RBP22.67■■□□□ 1.22
PHTF1-207ENST00000446739 MED23Q9ULK4 1368 aa22.66■■□□□ 1.22
PHTF1-207ENST00000446739 RIMBP2O15034 1052 aa22.66■■□□□ 1.22
PHTF1-207ENST00000446739 TAF5LO75529 589 aa22.66■■□□□ 1.22
PHTF1-207ENST00000446739 METTL24Q5JXM2 366 aa22.66■■□□□ 1.22
PHTF1-207ENST00000446739 SSH3Q8TE77 659 aa22.66■■□□□ 1.22
PHTF1-207ENST00000446739 GPR101Q96P66 508 aaPredicted RBP22.66■■□□□ 1.22
PHTF1-207ENST00000446739 SIL1Q9H173 461 aa22.66■■□□□ 1.22
PHTF1-207ENST00000446739 PA2G4Q9UQ80 394 aaKnown RBP22.66■■□□□ 1.22
PHTF1-207ENST00000446739 FZD9O00144 591 aa22.65■■□□□ 1.22
PHTF1-207ENST00000446739 ATG9AQ7Z3C6 839 aa22.65■■□□□ 1.22
PHTF1-207ENST00000446739 IL15P40933 162 aaPredicted RBP22.64■■□□□ 1.21
PHTF1-207ENST00000446739 UBE4AQ14139 1066 aa22.64■■□□□ 1.21
PHTF1-207ENST00000446739 RPAP2Q8IXW5 612 aaPredicted RBP22.64■■□□□ 1.21
PHTF1-207ENST00000446739 PSME4Q14997 1843 aa22.64■■□□□ 1.21
PHTF1-207ENST00000446739 WTIPA6NIX2 430 aaPredicted RBP22.63■■□□□ 1.21
PHTF1-207ENST00000446739 PDE8BO95263 885 aa22.63■■□□□ 1.21
PHTF1-207ENST00000446739 DPY19L2Q6NUT2 758 aa22.63■■□□□ 1.21
PHTF1-207ENST00000446739 C15orf52Q6ZUT6 534 aaKnown RBP22.63■■□□□ 1.21
PHTF1-207ENST00000446739 VGLL2Q8N8G2 317 aa22.63■■□□□ 1.21
PHTF1-207ENST00000446739 ZNRF3Q9ULT6 936 aa22.63■■□□□ 1.21
PHTF1-207ENST00000446739 SCN9AQ15858 1988 aa22.62■■□□□ 1.21
PHTF1-207ENST00000446739 GLTPD2A6NH11 291 aa22.62■■□□□ 1.21
PHTF1-207ENST00000446739 G3V3G9 751 aa22.62■■□□□ 1.21
PHTF1-207ENST00000446739 EIF6P56537 245 aaKnown RBP22.62■■□□□ 1.21
PHTF1-207ENST00000446739 DCAF8Q5TAQ9 597 aa22.62■■□□□ 1.21
PHTF1-207ENST00000446739 CRBNQ96SW2 442 aa22.62■■□□□ 1.21
PHTF1-207ENST00000446739 KDM2BQ8NHM5 1336 aa22.61■■□□□ 1.21
PHTF1-207ENST00000446739 DBNDD1Q9H9R9 158 aa22.61■■□□□ 1.21
PHTF1-207ENST00000446739 CEP126Q9P2H0 1117 aa22.61■■□□□ 1.21
PHTF1-207ENST00000446739 ZNF541Q9H0D2 1346 aa22.6■■□□□ 1.21
PHTF1-207ENST00000446739 SNAP23O00161 211 aa22.6■■□□□ 1.21
PHTF1-207ENST00000446739 ECE2O60344 883 aa22.6■■□□□ 1.21
PHTF1-207ENST00000446739 HMMRO75330 724 aa22.6■■□□□ 1.21
PHTF1-207ENST00000446739 G3BP1Q13283 466 aaKnown RBP eCLIP22.6■■□□□ 1.21
PHTF1-207ENST00000446739 DOK7Q18PE1 504 aa22.6■■□□□ 1.21
PHTF1-207ENST00000446739 IRS2Q9Y4H2 1338 aa22.59■■□□□ 1.21
PHTF1-207ENST00000446739 KLRK1P26718 216 aa22.59■■□□□ 1.21
PHTF1-207ENST00000446739 PUM3Q15397 648 aaKnown RBP22.59■■□□□ 1.21
PHTF1-207ENST00000446739 TXNRD3Q86VQ6 643 aa22.59■■□□□ 1.21
PHTF1-207ENST00000446739 COA1Q9GZY4 146 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms