RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 CSF1RP07333 972 aa30.16■■■□□ 2.42
C9orf3-207ENST00000445181 ITGA6P23229 1130 aa30.16■■■□□ 2.42
C9orf3-207ENST00000445181 FOXO4P98177 505 aa30.16■■■□□ 2.42
C9orf3-207ENST00000445181 FAM161AQ3B820 660 aa30.16■■■□□ 2.42
C9orf3-207ENST00000445181 ZNRF3Q9ULT6 936 aa30.16■■■□□ 2.42
C9orf3-207ENST00000445181 KIAA2012Q0VF49 1180 aa30.15■■■□□ 2.42
C9orf3-207ENST00000445181 ATF7IPQ6VMQ6 1270 aa30.15■■■□□ 2.42
C9orf3-207ENST00000445181 KLRG1Q96E93 195 aa30.15■■■□□ 2.42
C9orf3-207ENST00000445181 SUCLG2Q96I99 432 aa30.15■■■□□ 2.42
C9orf3-207ENST00000445181 NSFL1CQ9UNZ2 370 aaKnown RBP30.15■■■□□ 2.42
C9orf3-207ENST00000445181 CLEC11AQ9Y240 323 aa30.15■■■□□ 2.42
C9orf3-207ENST00000445181 UTYO14607 1347 aa30.15■■■□□ 2.42
C9orf3-207ENST00000445181 LMBR1LQ6UX01 489 aa30.14■■■□□ 2.42
C9orf3-207ENST00000445181 PNMA8AQ86V59 439 aaPredicted RBP30.14■■■□□ 2.42
C9orf3-207ENST00000445181 ANKRD18BA2A2Z9 1011 aa30.13■■■□□ 2.41
C9orf3-207ENST00000445181 TRIM27P14373 513 aa30.13■■■□□ 2.41
C9orf3-207ENST00000445181 LMOD1P29536 600 aaPredicted RBP30.13■■■□□ 2.41
C9orf3-207ENST00000445181 IGHMBP2P38935 993 aaKnown RBP30.13■■■□□ 2.41
C9orf3-207ENST00000445181 EPHA10Q5JZY3 1008 aa30.13■■■□□ 2.41
C9orf3-207ENST00000445181 ZKSCAN2Q63HK3 967 aa30.13■■■□□ 2.41
C9orf3-207ENST00000445181 USP44Q9H0E7 712 aa30.13■■■□□ 2.41
C9orf3-207ENST00000445181 LRRC37AA6NMS7 1700 aa30.13■■■□□ 2.41
C9orf3-207ENST00000445181 CXCL9Q07325 125 aa30.12■■■□□ 2.41
C9orf3-207ENST00000445181 IFIT5Q13325 482 aaKnown RBP30.12■■■□□ 2.41
C9orf3-207ENST00000445181 ANKIB1Q9P2G1 1089 aa30.12■■■□□ 2.41
C9orf3-207ENST00000445181 SCNN1DP51172 638 aa30.11■■■□□ 2.41
C9orf3-207ENST00000445181 GPSM2P81274 684 aa30.11■■■□□ 2.41
C9orf3-207ENST00000445181 CLUAP1Q96AJ1 413 aa30.11■■■□□ 2.41
C9orf3-207ENST00000445181 MPHOSPH8Q99549 860 aa30.1■■■□□ 2.41
C9orf3-207ENST00000445181 BSDC1Q9NW68 430 aaPredicted RBP30.1■■■□□ 2.41
C9orf3-207ENST00000445181 C6orf229H3BNL8 230 aa30.09■■■□□ 2.41
C9orf3-207ENST00000445181 EPS15P42566 896 aa30.09■■■□□ 2.41
C9orf3-207ENST00000445181 CCDC57Q2TAC2 916 aa30.09■■■□□ 2.41
C9orf3-207ENST00000445181 SPEF2Q9C093 1822 aa30.08■■■□□ 2.41
C9orf3-207ENST00000445181 DUOX1Q9NRD9 1551 aa30.08■■■□□ 2.41
C9orf3-207ENST00000445181 WASHC4Q2M389 1173 aa30.08■■■□□ 2.41
C9orf3-207ENST00000445181 TAF7LQ5H9L4 462 aa30.08■■■□□ 2.41
C9orf3-207ENST00000445181 INTS3Q68E01 1043 aaKnown RBP30.08■■■□□ 2.41
C9orf3-207ENST00000445181 BICC1Q9H694 974 aaKnown RBP30.08■■■□□ 2.41
C9orf3-207ENST00000445181 POLLQ9UGP5 575 aa30.08■■■□□ 2.41
C9orf3-207ENST00000445181 TNNQ9UQP3 1299 aa30.08■■■□□ 2.41
C9orf3-207ENST00000445181 RAD17O75943 681 aa30.07■■■□□ 2.4
C9orf3-207ENST00000445181 UBTFL1P0CB47 393 aaPredicted RBP30.07■■■□□ 2.4
C9orf3-207ENST00000445181 CIAPIN1Q6FI81 312 aa30.07■■■□□ 2.4
C9orf3-207ENST00000445181 KAZALD1Q96I82 304 aa30.07■■■□□ 2.4
C9orf3-207ENST00000445181 ITGBL1O95965 494 aaPredicted RBP30.06■■■□□ 2.4
C9orf3-207ENST00000445181 FTSJ3Q8IY81 847 aaKnown RBP30.06■■■□□ 2.4
C9orf3-207ENST00000445181 XDHP47989 1333 aa30.05■■■□□ 2.4
C9orf3-207ENST00000445181 PASKQ96RG2 1323 aa30.05■■■□□ 2.4
C9orf3-207ENST00000445181 RIMBP2O15034 1052 aa30.05■■■□□ 2.4
C9orf3-207ENST00000445181 TNIP1Q15025 636 aa30.05■■■□□ 2.4
C9orf3-207ENST00000445181 MAP1SQ66K74 1059 aaPredicted RBP30.05■■■□□ 2.4
C9orf3-207ENST00000445181 PODXL2Q9NZ53 605 aa30.05■■■□□ 2.4
C9orf3-207ENST00000445181 GGA1Q9UJY5 639 aa30.05■■■□□ 2.4
C9orf3-207ENST00000445181 MINPP1Q9UNW1 487 aa30.05■■■□□ 2.4
C9orf3-207ENST00000445181 LTBP1Q14766 1721 aa30.05■■■□□ 2.4
C9orf3-207ENST00000445181 UFL1O94874 794 aa30.04■■■□□ 2.4
C9orf3-207ENST00000445181 CNTROBQ8N137 903 aa30.04■■■□□ 2.4
C9orf3-207ENST00000445181 JMYQ8N9B5 988 aa30.04■■■□□ 2.4
C9orf3-207ENST00000445181 TBC1D16Q8TBP0 767 aa30.04■■■□□ 2.4
C9orf3-207ENST00000445181 EYA3Q99504 573 aa30.04■■■□□ 2.4
C9orf3-207ENST00000445181 CREBZFQ9NS37 354 aa30.04■■■□□ 2.4
C9orf3-207ENST00000445181 GPRC5DQ9NZD1 345 aa30.04■■■□□ 2.4
C9orf3-207ENST00000445181 RCAN3Q9UKA8 241 aa30.04■■■□□ 2.4
C9orf3-207ENST00000445181 HDAC5Q9UQL6 1122 aa30.04■■■□□ 2.4
C9orf3-207ENST00000445181 ADAMTSL1Q8N6G6 1762 aa30.04■■■□□ 2.4
C9orf3-207ENST00000445181 YDJCA8MPS7 323 aa30.03■■■□□ 2.4
C9orf3-207ENST00000445181 GMPSP49915 693 aaPredicted RBP30.03■■■□□ 2.4
C9orf3-207ENST00000445181 RABL6Q3YEC7 729 aaPredicted RBP30.02■■■□□ 2.4
C9orf3-207ENST00000445181 USP50Q70EL3 339 aaPredicted RBP30.02■■■□□ 2.4
C9orf3-207ENST00000445181 ANKRD44Q8N8A2 993 aa30.02■■■□□ 2.4
C9orf3-207ENST00000445181 DBNDD1Q9H9R9 158 aa30.02■■■□□ 2.4
C9orf3-207ENST00000445181 DZIP1LQ8IYY4 767 aaKnown RBP30.01■■■□□ 2.39
C9orf3-207ENST00000445181 TMEM57Q8N5G2 664 aa30.01■■■□□ 2.39
C9orf3-207ENST00000445181 ZNF594Q96JF6 807 aaPredicted RBP30.01■■■□□ 2.39
C9orf3-207ENST00000445181 GPR101Q96P66 508 aaPredicted RBP30.01■■■□□ 2.39
C9orf3-207ENST00000445181 MEIS3Q99687 375 aa30.01■■■□□ 2.39
C9orf3-207ENST00000445181 ADARB2Q9NS39 739 aaKnown RBP30.01■■■□□ 2.39
C9orf3-207ENST00000445181 GNAI3P08754 354 aa30■■■□□ 2.39
C9orf3-207ENST00000445181 ATP2B4P23634 1241 aa30■■■□□ 2.39
C9orf3-207ENST00000445181 ZC3H12CQ9C0D7 883 aaKnown RBP30■■■□□ 2.39
C9orf3-207ENST00000445181 ANKRD2Q9GZV1 360 aa30■■■□□ 2.39
C9orf3-207ENST00000445181 DOK7Q18PE1 504 aa29.99■■■□□ 2.39
C9orf3-207ENST00000445181 LDHAL6AQ6ZMR3 332 aa29.99■■■□□ 2.39
C9orf3-207ENST00000445181 CNNM1Q9NRU3 951 aa29.99■■■□□ 2.39
C9orf3-207ENST00000445181 LRRFIP2Q9Y608 721 aaKnown RBP29.98■■■□□ 2.39
C9orf3-207ENST00000445181 G3V3G9 751 aa29.97■■■□□ 2.39
C9orf3-207ENST00000445181 CHRNDQ07001 517 aa29.97■■■□□ 2.39
C9orf3-207ENST00000445181 DCAF8Q5TAQ9 597 aa29.97■■■□□ 2.39
C9orf3-207ENST00000445181 TMEM88BA6NKF7 163 aa29.96■■■□□ 2.39
C9orf3-207ENST00000445181 ECE2O60344 883 aa29.96■■■□□ 2.39
C9orf3-207ENST00000445181 KCNJ4P48050 445 aa29.96■■■□□ 2.39
C9orf3-207ENST00000445181 ITPRIPQ8IWB1 547 aa29.96■■■□□ 2.39
C9orf3-207ENST00000445181 PSMD14O00487 310 aa29.95■■■□□ 2.39
C9orf3-207ENST00000445181 KCNQ5Q9NR82 932 aa29.95■■■□□ 2.39
C9orf3-207ENST00000445181 MKRN1Q9UHC7 482 aaKnown RBP29.95■■■□□ 2.39
C9orf3-207ENST00000445181 CNOT7Q9UIV1 285 aaKnown RBP29.94■■■□□ 2.38
C9orf3-207ENST00000445181 LEMD3Q9Y2U8 911 aa29.94■■■□□ 2.38
C9orf3-207ENST00000445181 ZBTB12Q9Y330 459 aaPredicted RBP29.94■■■□□ 2.38
C9orf3-207ENST00000445181 MS4A1P11836 297 aa29.93■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 355.9 ms