RNA–Protein interactions for RNA: ENST00000445140.6

FXR1-203, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FXR1, Length 2,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-203ENST00000445140 SRGAP3O43295 1099 aa10.88□□□□□ -0.67
FXR1-203ENST00000445140 CCDC57Q2TAC2 916 aa10.88□□□□□ -0.67
FXR1-203ENST00000445140 TICAM2Q86XR7 235 aa10.88□□□□□ -0.67
FXR1-203ENST00000445140 CNKSR1Q969H4 720 aa10.88□□□□□ -0.67
FXR1-203ENST00000445140 VPS33BQ9H267 617 aa10.88□□□□□ -0.67
FXR1-203ENST00000445140 GREM2Q9H772 168 aa10.88□□□□□ -0.67
FXR1-203ENST00000445140 RIPOR2Q9Y4F9 1068 aa10.88□□□□□ -0.67
FXR1-203ENST00000445140 AOX1Q06278 1338 aa10.88□□□□□ -0.67
FXR1-203ENST00000445140 ITGA6P23229 1130 aa10.88□□□□□ -0.67
FXR1-203ENST00000445140 FAM161AQ3B820 660 aa10.88□□□□□ -0.67
FXR1-203ENST00000445140 BICDL1Q6ZP65 573 aa10.88□□□□□ -0.67
FXR1-203ENST00000445140 C3orf67Q6ZVT6 689 aa10.88□□□□□ -0.67
FXR1-203ENST00000445140 VGLL2Q8N8G2 317 aa10.88□□□□□ -0.67
FXR1-203ENST00000445140 DOCK2Q92608 1830 aa10.87□□□□□ -0.67
FXR1-203ENST00000445140 HCLS1P14317 486 aaPredicted RBP10.87□□□□□ -0.67
FXR1-203ENST00000445140 GTF2E1P29083 439 aaPredicted RBP10.87□□□□□ -0.67
FXR1-203ENST00000445140 SOGA3Q5TF21 947 aa10.87□□□□□ -0.67
FXR1-203ENST00000445140 ATG9AQ7Z3C6 839 aa10.87□□□□□ -0.67
FXR1-203ENST00000445140 SYNE4Q8N205 404 aa10.87□□□□□ -0.67
FXR1-203ENST00000445140 MAST2Q6P0Q8 1798 aa10.87□□□□□ -0.67
FXR1-203ENST00000445140 LTBP3Q9NS15 1303 aa10.87□□□□□ -0.67
FXR1-203ENST00000445140 MYH13Q9UKX3 1938 aa10.87□□□□□ -0.67
FXR1-203ENST00000445140 DDX46Q7L014 1031 aaKnown RBP10.87□□□□□ -0.67
FXR1-203ENST00000445140 SP8Q8IXZ3 490 aa10.87□□□□□ -0.67
FXR1-203ENST00000445140 KIF1BPQ96EK5 621 aa10.87□□□□□ -0.67
FXR1-203ENST00000445140 CCDC136Q96JN2 1154 aa10.87□□□□□ -0.67
FXR1-203ENST00000445140 ANKRD2Q9GZV1 360 aa10.87□□□□□ -0.67
FXR1-203ENST00000445140 H0YIN7 160 aa10.86□□□□□ -0.67
FXR1-203ENST00000445140 MSL1Q68DK7 614 aa10.86□□□□□ -0.67
FXR1-203ENST00000445140 ANKRD18AQ8IVF6 992 aa10.86□□□□□ -0.67
FXR1-203ENST00000445140 C7orf43Q8WVR3 580 aa10.86□□□□□ -0.67
FXR1-203ENST00000445140 RTFDC1Q9BY42 306 aaPredicted RBP10.86□□□□□ -0.67
FXR1-203ENST00000445140 SALL3Q9BXA9 1300 aa10.86□□□□□ -0.67
FXR1-203ENST00000445140 IRS2Q9Y4H2 1338 aa10.86□□□□□ -0.67
FXR1-203ENST00000445140 KCNA3P22001 575 aa10.86□□□□□ -0.67
FXR1-203ENST00000445140 IGHMBP2P38935 993 aaKnown RBP10.86□□□□□ -0.67
FXR1-203ENST00000445140 RPS8P62241 208 aaKnown RBP10.86□□□□□ -0.67
FXR1-203ENST00000445140 NUCB1Q02818 461 aa10.86□□□□□ -0.67
FXR1-203ENST00000445140 RPGRQ92834 1020 aaKnown RBP10.86□□□□□ -0.67
FXR1-203ENST00000445140 ZNF512BQ96KM6 892 aaPredicted RBP10.86□□□□□ -0.67
FXR1-203ENST00000445140 C1orf115Q9H7X2 142 aa10.86□□□□□ -0.67
FXR1-203ENST00000445140 PDS5AQ29RF7 1337 aaKnown RBP10.86□□□□□ -0.67
FXR1-203ENST00000445140 ZBTB7AO95365 584 aa10.85□□□□□ -0.67
FXR1-203ENST00000445140 HOXD11P31277 338 aaPredicted RBP10.85□□□□□ -0.67
FXR1-203ENST00000445140 ATP6V0A2Q9Y487 856 aa10.85□□□□□ -0.67
FXR1-203ENST00000445140 FGFR2P21802 821 aa10.85□□□□□ -0.67
FXR1-203ENST00000445140 C2CD5Q86YS7 1000 aa10.85□□□□□ -0.67
FXR1-203ENST00000445140 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.85□□□□□ -0.67
FXR1-203ENST00000445140 AKAP11Q9UKA4 1901 aa10.84□□□□□ -0.67
FXR1-203ENST00000445140 IGHDP01880 384 aa10.84□□□□□ -0.67
FXR1-203ENST00000445140 OSBPL3Q9H4L5 887 aa10.84□□□□□ -0.67
FXR1-203ENST00000445140 LEMD3Q9Y2U8 911 aa10.84□□□□□ -0.67
FXR1-203ENST00000445140 PSDA5PKW4 1024 aaPredicted RBP10.84□□□□□ -0.67
FXR1-203ENST00000445140 UBE4AQ14139 1066 aa10.84□□□□□ -0.67
FXR1-203ENST00000445140 AKAP2Q9Y2D5 859 aa10.84□□□□□ -0.67
FXR1-203ENST00000445140 MED23Q9ULK4 1368 aa10.84□□□□□ -0.67
FXR1-203ENST00000445140 G3BP1Q13283 466 aaKnown RBP eCLIP10.83□□□□□ -0.685e-6■■□□□ 11.9
FXR1-203ENST00000445140 TMED8Q6PL24 325 aaPredicted RBP10.83□□□□□ -0.68
FXR1-203ENST00000445140 STAP2Q9UGK3 403 aa10.83□□□□□ -0.68
FXR1-203ENST00000445140 SASH1O94885 1247 aa10.83□□□□□ -0.68
FXR1-203ENST00000445140 RHPN1Q8TCX5 695 aa10.83□□□□□ -0.68
FXR1-203ENST00000445140 LRRCC1Q9C099 1032 aa10.83□□□□□ -0.68
FXR1-203ENST00000445140 XDHP47989 1333 aa10.83□□□□□ -0.68
FXR1-203ENST00000445140 SBF1O95248 1867 aa10.83□□□□□ -0.68
FXR1-203ENST00000445140 PPEF1O14829 653 aaPredicted RBP10.82□□□□□ -0.68
FXR1-203ENST00000445140 IRX6P78412 446 aaPredicted RBP10.82□□□□□ -0.68
FXR1-203ENST00000445140 CELF1Q92879 486 aaKnown RBP10.82□□□□□ -0.68
FXR1-203ENST00000445140 PSMD1Q99460 953 aa10.82□□□□□ -0.68
FXR1-203ENST00000445140 RFX7Q2KHR2 1363 aa10.82□□□□□ -0.68
FXR1-203ENST00000445140 MYH7P12883 1935 aa10.82□□□□□ -0.68
FXR1-203ENST00000445140 PDE8BO95263 885 aa10.82□□□□□ -0.68
FXR1-203ENST00000445140 JARID2Q92833 1246 aaPredicted RBP10.82□□□□□ -0.68
FXR1-203ENST00000445140 SEC31BQ9NQW1 1179 aa10.82□□□□□ -0.68
FXR1-203ENST00000445140 MINPP1Q9UNW1 487 aa10.82□□□□□ -0.68
FXR1-203ENST00000445140 ZNF804BA4D1E1 1349 aa10.82□□□□□ -0.68
FXR1-203ENST00000445140 TTC41PQ6P2S7 1318 aa10.82□□□□□ -0.68
FXR1-203ENST00000445140 AK9Q5TCS8 1911 aa10.82□□□□□ -0.68
FXR1-203ENST00000445140 NPHP1O15259 732 aa10.81□□□□□ -0.68
FXR1-203ENST00000445140 SURF6O75683 361 aaKnown RBP10.81□□□□□ -0.68
FXR1-203ENST00000445140 ATP2B4P23634 1241 aa10.81□□□□□ -0.68
FXR1-203ENST00000445140 PUM3Q15397 648 aaKnown RBP10.81□□□□□ -0.68
FXR1-203ENST00000445140 LDHAL6AQ6ZMR3 332 aa10.81□□□□□ -0.68
FXR1-203ENST00000445140 TTLL6Q8N841 843 aa10.81□□□□□ -0.68
FXR1-203ENST00000445140 PIM2Q9P1W9 311 aa10.81□□□□□ -0.68
FXR1-203ENST00000445140 CHD1LQ86WJ1 897 aa10.81□□□□□ -0.68
FXR1-203ENST00000445140 SUPT20HQ8NEM7 779 aa10.81□□□□□ -0.68
FXR1-203ENST00000445140 MPHOSPH8Q99549 860 aa10.81□□□□□ -0.68
FXR1-203ENST00000445140 FAM177BA6PVY3 158 aa10.81□□□□□ -0.68
FXR1-203ENST00000445140 SEMA3EO15041 775 aa10.81□□□□□ -0.68
FXR1-203ENST00000445140 DPEP1P16444 411 aa10.81□□□□□ -0.68
FXR1-203ENST00000445140 TNNI3KQ59H18 835 aa10.81□□□□□ -0.68
FXR1-203ENST00000445140 TAF7LQ5H9L4 462 aa10.81□□□□□ -0.68
FXR1-203ENST00000445140 PRPF40BQ6NWY9 871 aaKnown RBP10.81□□□□□ -0.68
FXR1-203ENST00000445140 UBE2Q2Q8WVN8 375 aa10.81□□□□□ -0.68
FXR1-203ENST00000445140 LPIN2Q92539 896 aa10.81□□□□□ -0.68
FXR1-203ENST00000445140 FPGT-TNNI3KV9GXZ4 949 aa10.81□□□□□ -0.68
FXR1-203ENST00000445140 RTKN2Q8IZC4 609 aa10.8□□□□□ -0.68
FXR1-203ENST00000445140 CEP126Q9P2H0 1117 aa10.8□□□□□ -0.68
FXR1-203ENST00000445140 TIAM2Q8IVF5 1701 aa10.8□□□□□ -0.68
FXR1-203ENST00000445140 CHRNDQ07001 517 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms