RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 EAPPQ56P03 285 aaPredicted RBP7.9□□□□□ -1.14
HMGB3P6-201ENST00000444896 LYPD4Q6UWN0 246 aa7.9□□□□□ -1.14
HMGB3P6-201ENST00000444896 GOLGA6L1Q8N7Z2 621 aa7.9□□□□□ -1.14
HMGB3P6-201ENST00000444896 NEDD1Q8NHV4 660 aa7.9□□□□□ -1.14
HMGB3P6-201ENST00000444896 WHAMMQ8TF30 809 aa7.9□□□□□ -1.14
HMGB3P6-201ENST00000444896 PMEPA1Q969W9 287 aa7.9□□□□□ -1.14
HMGB3P6-201ENST00000444896 UBE2OQ9C0C9 1292 aaKnown RBP7.9□□□□□ -1.14
HMGB3P6-201ENST00000444896 STK17AQ9UEE5 414 aa7.9□□□□□ -1.14
HMGB3P6-201ENST00000444896 GDF2Q9UK05 429 aaPredicted RBP7.9□□□□□ -1.14
HMGB3P6-201ENST00000444896 AMOTL2Q9Y2J4 779 aa7.9□□□□□ -1.14
HMGB3P6-201ENST00000444896 LOC102724428A0A0B4J2F2 783 aa7.89□□□□□ -1.15
HMGB3P6-201ENST00000444896 J3QW42 95 aa7.89□□□□□ -1.15
HMGB3P6-201ENST00000444896 SIK1P57059 783 aa7.89□□□□□ -1.15
HMGB3P6-201ENST00000444896 MLLT1Q03111 559 aaPredicted RBP7.89□□□□□ -1.15
HMGB3P6-201ENST00000444896 SLCO4C1Q6ZQN7 724 aa7.89□□□□□ -1.15
HMGB3P6-201ENST00000444896 HFE2Q6ZVN8 426 aa7.89□□□□□ -1.15
HMGB3P6-201ENST00000444896 GALNT12Q8IXK2 581 aa7.89□□□□□ -1.15
HMGB3P6-201ENST00000444896 NSUN5Q96P11 429 aaKnown RBP7.89□□□□□ -1.15
HMGB3P6-201ENST00000444896 RNF19AQ9NV58 838 aa7.89□□□□□ -1.15
HMGB3P6-201ENST00000444896 ELOA3CA0A087WX78 387 aaPredicted RBP7.88□□□□□ -1.15
HMGB3P6-201ENST00000444896 ELOA3DA6NLF2 546 aaPredicted RBP7.88□□□□□ -1.15
HMGB3P6-201ENST00000444896 PHF20L1A8MW92 1017 aa7.88□□□□□ -1.15
HMGB3P6-201ENST00000444896 LDHBP07195 334 aaKnown RBP7.88□□□□□ -1.15
HMGB3P6-201ENST00000444896 EPXP11678 715 aa7.88□□□□□ -1.15
HMGB3P6-201ENST00000444896 AMPD1P23109 780 aa7.88□□□□□ -1.15
HMGB3P6-201ENST00000444896 ADH7P40394 386 aa7.88□□□□□ -1.15
HMGB3P6-201ENST00000444896 TBC1D8BQ0IIM8 1120 aa7.88□□□□□ -1.15
HMGB3P6-201ENST00000444896 HYAL2Q12891 473 aa7.88□□□□□ -1.15
HMGB3P6-201ENST00000444896 ELOA3BQ3SY89 546 aa7.88□□□□□ -1.15
HMGB3P6-201ENST00000444896 PEAR1Q5VY43 1037 aaPredicted RBP7.88□□□□□ -1.15
HMGB3P6-201ENST00000444896 CEP120Q8N960 986 aa7.88□□□□□ -1.15
HMGB3P6-201ENST00000444896 ELOA3Q8NG57 546 aa7.88□□□□□ -1.15
HMGB3P6-201ENST00000444896 CCDC74AQ96AQ1 378 aa7.88□□□□□ -1.15
HMGB3P6-201ENST00000444896 BCL2L13Q9BXK5 485 aa7.88□□□□□ -1.15
HMGB3P6-201ENST00000444896 SLC6A14Q9UN76 642 aa7.88□□□□□ -1.15
HMGB3P6-201ENST00000444896 RBM47A0AV96 593 aaKnown RBP7.87□□□□□ -1.15
HMGB3P6-201ENST00000444896 OIP5O43482 229 aa7.87□□□□□ -1.15
HMGB3P6-201ENST00000444896 CELA2BP08218 269 aaPredicted RBP7.87□□□□□ -1.15
HMGB3P6-201ENST00000444896 ACPPP15309 386 aa7.87□□□□□ -1.15
HMGB3P6-201ENST00000444896 IRS1P35568 1242 aa7.87□□□□□ -1.15
HMGB3P6-201ENST00000444896 EPS8L3Q8TE67 593 aaKnown RBP7.87□□□□□ -1.15
HMGB3P6-201ENST00000444896 LATS2Q9NRM7 1088 aa7.87□□□□□ -1.15
HMGB3P6-201ENST00000444896 NAGPAQ9UK23 515 aa7.87□□□□□ -1.15
HMGB3P6-201ENST00000444896 STARD13Q9Y3M8 1113 aa7.87□□□□□ -1.15
HMGB3P6-201ENST00000444896 SHISA8B8ZZ34 492 aa7.86□□□□□ -1.15
HMGB3P6-201ENST00000444896 BCRP11274 1271 aa7.86□□□□□ -1.15
HMGB3P6-201ENST00000444896 ZNF16P17020 682 aaPredicted RBP7.86□□□□□ -1.15
HMGB3P6-201ENST00000444896 LORP23490 312 aaPredicted RBP7.86□□□□□ -1.15
HMGB3P6-201ENST00000444896 PI16Q6UXB8 463 aa7.86□□□□□ -1.15
HMGB3P6-201ENST00000444896 GALNT6Q8NCL4 622 aa7.86□□□□□ -1.15
HMGB3P6-201ENST00000444896 GIPC2Q8TF65 315 aa7.86□□□□□ -1.15
HMGB3P6-201ENST00000444896 EDARADDQ8WWZ3 215 aa7.86□□□□□ -1.15
HMGB3P6-201ENST00000444896 NPHS2Q9NP85 383 aa7.86□□□□□ -1.15
HMGB3P6-201ENST00000444896 NFKBIEO00221 500 aa7.85□□□□□ -1.15
HMGB3P6-201ENST00000444896 TRPA1O75762 1119 aa7.85□□□□□ -1.15
HMGB3P6-201ENST00000444896 CPB1P15086 417 aa7.85□□□□□ -1.15
HMGB3P6-201ENST00000444896 PCSK7Q16549 785 aa7.85□□□□□ -1.15
HMGB3P6-201ENST00000444896 ZNF385CQ66K41 422 aaPredicted RBP7.85□□□□□ -1.15
HMGB3P6-201ENST00000444896 ALG1LQ6GMV1 187 aa7.85□□□□□ -1.15
HMGB3P6-201ENST00000444896 NCAPG2Q86XI2 1143 aa7.85□□□□□ -1.15
HMGB3P6-201ENST00000444896 RRAGCQ9HB90 399 aa7.85□□□□□ -1.15
HMGB3P6-201ENST00000444896 A0A1W2PP55 124 aa7.84□□□□□ -1.15
HMGB3P6-201ENST00000444896 PRPF40AO75400 957 aaKnown RBP7.84□□□□□ -1.15
HMGB3P6-201ENST00000444896 PERM1Q5SV97 790 aa7.84□□□□□ -1.15
HMGB3P6-201ENST00000444896 KIAA0319Q5VV43 1072 aa7.84□□□□□ -1.15
HMGB3P6-201ENST00000444896 C20orf204Q6ZNR8 217 aa7.84□□□□□ -1.15
HMGB3P6-201ENST00000444896 PODNQ7Z5L7 613 aa7.84□□□□□ -1.15
HMGB3P6-201ENST00000444896 FAM35AQ86V20 835 aa7.84□□□□□ -1.15
HMGB3P6-201ENST00000444896 FBF1Q8TES7 1133 aa7.84□□□□□ -1.15
HMGB3P6-201ENST00000444896 ZNF428Q96B54 188 aa7.84□□□□□ -1.15
HMGB3P6-201ENST00000444896 BTBD6Q96KE9 485 aa7.84□□□□□ -1.15
HMGB3P6-201ENST00000444896 DUSP9Q99956 384 aaKnown RBP7.84□□□□□ -1.15
HMGB3P6-201ENST00000444896 LPIN3Q9BQK8 851 aa7.84□□□□□ -1.15
HMGB3P6-201ENST00000444896 LRRC4BQ9NT99 713 aa7.84□□□□□ -1.15
HMGB3P6-201ENST00000444896 EDN3P14138 238 aa7.83□□□□□ -1.16
HMGB3P6-201ENST00000444896 ATP11AP98196 1134 aa7.83□□□□□ -1.16
HMGB3P6-201ENST00000444896 ATP2B2Q01814 1243 aa7.83□□□□□ -1.16
HMGB3P6-201ENST00000444896 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.83□□□□□ -1.16
HMGB3P6-201ENST00000444896 ADAMTSL4Q6UY14 1074 aa7.83□□□□□ -1.16
HMGB3P6-201ENST00000444896 HHIPQ96QV1 700 aa7.83□□□□□ -1.16
HMGB3P6-201ENST00000444896 ZKSCAN3Q9BRR0 538 aa7.83□□□□□ -1.16
HMGB3P6-201ENST00000444896 RASSF4Q9H2L5 321 aa7.83□□□□□ -1.16
HMGB3P6-201ENST00000444896 DZANK1Q9NVP4 752 aa7.83□□□□□ -1.16
HMGB3P6-201ENST00000444896 HOXB4P17483 251 aaPredicted RBP7.82□□□□□ -1.16
HMGB3P6-201ENST00000444896 EIF2AK2P19525 551 aaKnown RBP7.82□□□□□ -1.16
HMGB3P6-201ENST00000444896 ALAS2P22557 587 aa7.82□□□□□ -1.16
HMGB3P6-201ENST00000444896 OSMRQ99650 979 aa7.82□□□□□ -1.16
HMGB3P6-201ENST00000444896 PARP2Q9UGN5 583 aa7.82□□□□□ -1.16
HMGB3P6-201ENST00000444896 UNCXA6NJT0 531 aa7.81□□□□□ -1.16
HMGB3P6-201ENST00000444896 ARHGEF15O94989 841 aa7.81□□□□□ -1.16
HMGB3P6-201ENST00000444896 GHRHP01286 108 aa7.81□□□□□ -1.16
HMGB3P6-201ENST00000444896 GRIK5Q16478 980 aa7.81□□□□□ -1.16
HMGB3P6-201ENST00000444896 ZNF326Q5BKZ1 582 aaKnown RBP7.81□□□□□ -1.16
HMGB3P6-201ENST00000444896 PSAPL1Q6NUJ1 521 aa7.81□□□□□ -1.16
HMGB3P6-201ENST00000444896 C8orf86Q6ZUL3 223 aa7.81□□□□□ -1.16
HMGB3P6-201ENST00000444896 CHSY3Q70JA7 882 aa7.81□□□□□ -1.16
HMGB3P6-201ENST00000444896 GLIS3Q8NEA6 775 aa7.81□□□□□ -1.16
HMGB3P6-201ENST00000444896 PLD4Q96BZ4 506 aa7.81□□□□□ -1.16
HMGB3P6-201ENST00000444896 SPACA7Q96KW9 195 aa7.81□□□□□ -1.16
HMGB3P6-201ENST00000444896 TCF12Q99081 682 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms