RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 SBF2Q86WG5 1849 aa22.68■■□□□ 1.22
SEMA3D-202ENST00000444867 RNF20Q5VTR2 975 aa22.68■■□□□ 1.22
SEMA3D-202ENST00000444867 TTC14Q96N46 770 aa22.68■■□□□ 1.22
SEMA3D-202ENST00000444867 UPF3BQ9BZI7 483 aaKnown RBP22.68■■□□□ 1.22
SEMA3D-202ENST00000444867 ARAP2Q8WZ64 1704 aa22.67■■□□□ 1.22
SEMA3D-202ENST00000444867 PTMSP20962 102 aa22.67■■□□□ 1.22
SEMA3D-202ENST00000444867 KCNJ4P48050 445 aa22.67■■□□□ 1.22
SEMA3D-202ENST00000444867 METTL24Q5JXM2 366 aa22.67■■□□□ 1.22
SEMA3D-202ENST00000444867 RC3H1Q5TC82 1133 aaKnown RBP22.67■■□□□ 1.22
SEMA3D-202ENST00000444867 PRPF40BQ6NWY9 871 aaKnown RBP22.67■■□□□ 1.22
SEMA3D-202ENST00000444867 CLEC17AQ6ZS10 378 aa22.67■■□□□ 1.22
SEMA3D-202ENST00000444867 LINC00116Q8NCU8 138 aa22.67■■□□□ 1.22
SEMA3D-202ENST00000444867 XAGE2Q96GT9 111 aa22.67■■□□□ 1.22
SEMA3D-202ENST00000444867 HMG20BQ9P0W2 317 aa22.67■■□□□ 1.22
SEMA3D-202ENST00000444867 LY75O60449 1722 aa22.66■■□□□ 1.22
SEMA3D-202ENST00000444867 RTL9Q8NET4 1388 aa22.66■■□□□ 1.22
SEMA3D-202ENST00000444867 LRRFIP1Q32MZ4 808 aaKnown RBP22.66■■□□□ 1.22
SEMA3D-202ENST00000444867 MCMDC2Q4G0Z9 681 aa22.66■■□□□ 1.22
SEMA3D-202ENST00000444867 GORABQ5T7V8 394 aa22.66■■□□□ 1.22
SEMA3D-202ENST00000444867 CREB3L3Q68CJ9 461 aa22.66■■□□□ 1.22
SEMA3D-202ENST00000444867 DDX46Q7L014 1031 aaKnown RBP22.66■■□□□ 1.22
SEMA3D-202ENST00000444867 GJD4Q96KN9 370 aaPredicted RBP22.66■■□□□ 1.22
SEMA3D-202ENST00000444867 CNNM1Q9NRU3 951 aa22.66■■□□□ 1.22
SEMA3D-202ENST00000444867 HELLSQ9NRZ9 838 aa22.66■■□□□ 1.22
SEMA3D-202ENST00000444867 GOLIM4O00461 696 aa22.65■■□□□ 1.22
SEMA3D-202ENST00000444867 TAF5LO75529 589 aa22.65■■□□□ 1.22
SEMA3D-202ENST00000444867 ATP2B3Q16720 1220 aa22.65■■□□□ 1.22
SEMA3D-202ENST00000444867 TTC39AQ5SRH9 613 aa22.65■■□□□ 1.22
SEMA3D-202ENST00000444867 NIP7Q9Y221 180 aaKnown RBP eCLIP22.65■■□□□ 1.22
SEMA3D-202ENST00000444867 NTSR2O95665 410 aa22.64■■□□□ 1.22
SEMA3D-202ENST00000444867 USPL1Q5W0Q7 1092 aa22.64■■□□□ 1.22
SEMA3D-202ENST00000444867 ZSWIM6Q9HCJ5 1215 aa22.64■■□□□ 1.22
SEMA3D-202ENST00000444867 MYH7P12883 1935 aa22.64■■□□□ 1.21
SEMA3D-202ENST00000444867 SLC27A2O14975 620 aa22.64■■□□□ 1.21
SEMA3D-202ENST00000444867 CYP2E1P05181 493 aaPredicted RBP22.64■■□□□ 1.21
SEMA3D-202ENST00000444867 PSMA5P28066 241 aa22.64■■□□□ 1.21
SEMA3D-202ENST00000444867 GSE1Q14687 1217 aa22.64■■□□□ 1.21
SEMA3D-202ENST00000444867 TSGA10IPQ3SY00 556 aa22.64■■□□□ 1.21
SEMA3D-202ENST00000444867 VPS53Q5VIR6 699 aa22.64■■□□□ 1.21
SEMA3D-202ENST00000444867 ZNF589Q86UQ0 364 aaPredicted RBP22.64■■□□□ 1.21
SEMA3D-202ENST00000444867 VGLL2Q8N8G2 317 aa22.64■■□□□ 1.21
SEMA3D-202ENST00000444867 ZNF512BQ96KM6 892 aaPredicted RBP22.64■■□□□ 1.21
SEMA3D-202ENST00000444867 MROH5Q6ZUA9 1318 aa22.64■■□□□ 1.21
SEMA3D-202ENST00000444867 ONECUT3O60422 494 aaPredicted RBP22.63■■□□□ 1.21
SEMA3D-202ENST00000444867 CASTP20810 708 aaKnown RBP22.63■■□□□ 1.21
SEMA3D-202ENST00000444867 CYP46A1Q9Y6A2 500 aa22.63■■□□□ 1.21
SEMA3D-202ENST00000444867 NDUFB9Q9Y6M9 179 aa22.63■■□□□ 1.21
SEMA3D-202ENST00000444867 TAF1LQ8IZX4 1826 aa22.63■■□□□ 1.21
SEMA3D-202ENST00000444867 RPAP1Q9BWH6 1393 aaPredicted RBP22.63■■□□□ 1.21
SEMA3D-202ENST00000444867 SSFA2P28290 1259 aa22.62■■□□□ 1.21
SEMA3D-202ENST00000444867 CCDC152Q4G0S7 254 aa22.62■■□□□ 1.21
SEMA3D-202ENST00000444867 ZGPATQ8N5A5 531 aaKnown RBP22.62■■□□□ 1.21
SEMA3D-202ENST00000444867 JAKMIP1Q96N16 626 aaKnown RBP22.62■■□□□ 1.21
SEMA3D-202ENST00000444867 U3KPZ7 1027 aaPredicted RBP22.62■■□□□ 1.21
SEMA3D-202ENST00000444867 PDE8BO95263 885 aa22.61■■□□□ 1.21
SEMA3D-202ENST00000444867 ADORA1P30542 326 aa22.61■■□□□ 1.21
SEMA3D-202ENST00000444867 ZMYM1Q5SVZ6 1142 aa22.61■■□□□ 1.21
SEMA3D-202ENST00000444867 LIMCH1Q9UPQ0 1083 aa22.61■■□□□ 1.21
SEMA3D-202ENST00000444867 AKAP11Q9UKA4 1901 aa22.61■■□□□ 1.21
SEMA3D-202ENST00000444867 RNF113AO15541 343 aaKnown RBP22.6■■□□□ 1.21
SEMA3D-202ENST00000444867 AK2P54819 239 aa22.6■■□□□ 1.21
SEMA3D-202ENST00000444867 RUFY3Q7L099 469 aa22.6■■□□□ 1.21
SEMA3D-202ENST00000444867 RPS6KA4O75676 772 aa22.6■■□□□ 1.21
SEMA3D-202ENST00000444867 ZFYP08048 801 aaPredicted RBP22.6■■□□□ 1.21
SEMA3D-202ENST00000444867 HCLS1P14317 486 aaPredicted RBP22.6■■□□□ 1.21
SEMA3D-202ENST00000444867 RXRBP28702 533 aa22.6■■□□□ 1.21
SEMA3D-202ENST00000444867 RBM6P78332 1123 aaKnown RBP22.6■■□□□ 1.21
SEMA3D-202ENST00000444867 KRT32Q14532 448 aa22.6■■□□□ 1.21
SEMA3D-202ENST00000444867 PDRG1Q9NUG6 133 aa22.6■■□□□ 1.21
SEMA3D-202ENST00000444867 CASZ1Q86V15 1759 aa22.59■■□□□ 1.21
SEMA3D-202ENST00000444867 ZSCAN31Q96LW9 406 aaPredicted RBP22.59■■□□□ 1.21
SEMA3D-202ENST00000444867 ALDH8A1Q9H2A2 487 aaPredicted RBP22.59■■□□□ 1.21
SEMA3D-202ENST00000444867 COL24A1Q17RW2 1714 aa22.58■■□□□ 1.21
SEMA3D-202ENST00000444867 PUM3Q15397 648 aaKnown RBP22.58■■□□□ 1.21
SEMA3D-202ENST00000444867 ADCK5Q3MIX3 580 aa22.58■■□□□ 1.21
SEMA3D-202ENST00000444867 GOLGA6L22H0YM25 854 aa22.57■■□□□ 1.2
SEMA3D-202ENST00000444867 NOL8Q76FK4 1167 aaKnown RBP22.57■■□□□ 1.2
SEMA3D-202ENST00000444867 LPIN2Q92539 896 aa22.57■■□□□ 1.2
SEMA3D-202ENST00000444867 DSCC1Q9BVC3 393 aa22.57■■□□□ 1.2
SEMA3D-202ENST00000444867 FAM177BA6PVY3 158 aa22.57■■□□□ 1.2
SEMA3D-202ENST00000444867 UQCRFS1P1P0C7P4 283 aa22.57■■□□□ 1.2
SEMA3D-202ENST00000444867 FGFR2P21802 821 aa22.57■■□□□ 1.2
SEMA3D-202ENST00000444867 FKBP4Q02790 459 aaKnown RBP eCLIP22.57■■□□□ 1.2
SEMA3D-202ENST00000444867 SH2B1Q9NRF2 756 aaPredicted RBP22.57■■□□□ 1.2
SEMA3D-202ENST00000444867 NARFQ9UHQ1 456 aa22.57■■□□□ 1.2
SEMA3D-202ENST00000444867 CCNL1Q9UK58 526 aaPredicted RBP22.57■■□□□ 1.2
SEMA3D-202ENST00000444867 ANKRD1Q15327 319 aa22.56■■□□□ 1.2
SEMA3D-202ENST00000444867 PTF1AQ7RTS3 328 aa22.56■■□□□ 1.2
SEMA3D-202ENST00000444867 SEC62Q99442 399 aaKnown RBP22.56■■□□□ 1.2
SEMA3D-202ENST00000444867 MPHOSPH8Q99549 860 aa22.56■■□□□ 1.2
SEMA3D-202ENST00000444867 IGHMBP2P38935 993 aaKnown RBP22.55■■□□□ 1.2
SEMA3D-202ENST00000444867 SKOR2Q2VWA4 1001 aaPredicted RBP22.55■■□□□ 1.2
SEMA3D-202ENST00000444867 BLOC1S2Q6QNY1 142 aa22.55■■□□□ 1.2
SEMA3D-202ENST00000444867 TRAK2O60296 914 aa22.54■■□□□ 1.2
SEMA3D-202ENST00000444867 BAG4O95429 457 aaKnown RBP22.54■■□□□ 1.2
SEMA3D-202ENST00000444867 ARID4AP29374 1257 aaPredicted RBP22.54■■□□□ 1.2
SEMA3D-202ENST00000444867 TTF1Q15361 905 aaPredicted RBP22.54■■□□□ 1.2
SEMA3D-202ENST00000444867 ZSCAN25Q6NSZ9 544 aa22.54■■□□□ 1.2
SEMA3D-202ENST00000444867 CCDC129Q6ZRS4 1044 aa22.54■■□□□ 1.2
SEMA3D-202ENST00000444867 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms