RNA–Protein interactions for RNA: ENST00000444408.1

AP1S3-207, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4

Gene AP1S3, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-207ENST00000444408 COL4A5P29400 1685 aa21.52■■□□□ 1.04
AP1S3-207ENST00000444408 GNAI3P08754 354 aa21.51■■□□□ 1.03
AP1S3-207ENST00000444408 IGHMBP2P38935 993 aaKnown RBP21.51■■□□□ 1.03
AP1S3-207ENST00000444408 PUS3Q9BZE2 481 aaKnown RBP21.51■■□□□ 1.03
AP1S3-207ENST00000444408 C1orf115Q9H7X2 142 aa21.51■■□□□ 1.03
AP1S3-207ENST00000444408 POLLQ9UGP5 575 aa21.51■■□□□ 1.03
AP1S3-207ENST00000444408 MINPP1Q9UNW1 487 aa21.51■■□□□ 1.03
AP1S3-207ENST00000444408 ZBTB7BO15156 539 aaPredicted RBP21.5■■□□□ 1.03
AP1S3-207ENST00000444408 IARSP41252 1262 aaKnown RBP21.5■■□□□ 1.03
AP1S3-207ENST00000444408 RTFDC1Q9BY42 306 aaPredicted RBP21.5■■□□□ 1.03
AP1S3-207ENST00000444408 RFX5P48382 616 aaPredicted RBP21.49■■□□□ 1.03
AP1S3-207ENST00000444408 AOC3Q16853 763 aa21.49■■□□□ 1.03
AP1S3-207ENST00000444408 MPHOSPH8Q99549 860 aa21.49■■□□□ 1.03
AP1S3-207ENST00000444408 CCDC88AQ3V6T2 1871 aa21.49■■□□□ 1.03
AP1S3-207ENST00000444408 LTBP1Q14766 1721 aa21.49■■□□□ 1.03
AP1S3-207ENST00000444408 TAF7LQ5H9L4 462 aa21.48■■□□□ 1.03
AP1S3-207ENST00000444408 HELBQ8NG08 1087 aaPredicted RBP21.48■■□□□ 1.03
AP1S3-207ENST00000444408 TBC1D16Q8TBP0 767 aa21.48■■□□□ 1.03
AP1S3-207ENST00000444408 ANKIB1Q9P2G1 1089 aa21.48■■□□□ 1.03
AP1S3-207ENST00000444408 C6orf229H3BNL8 230 aa21.47■■□□□ 1.03
AP1S3-207ENST00000444408 SNAP23O00161 211 aa21.47■■□□□ 1.03
AP1S3-207ENST00000444408 GNAI2P04899 355 aa21.47■■□□□ 1.03
AP1S3-207ENST00000444408 RRP1P56182 461 aaKnown RBP21.47■■□□□ 1.03
AP1S3-207ENST00000444408 MVPQ14764 893 aaKnown RBP21.47■■□□□ 1.03
AP1S3-207ENST00000444408 GRIPAP1Q4V328 841 aa21.47■■□□□ 1.03
AP1S3-207ENST00000444408 LDHAL6AQ6ZMR3 332 aa21.47■■□□□ 1.03
AP1S3-207ENST00000444408 DNAJC5GQ8N7S2 189 aa21.47■■□□□ 1.03
AP1S3-207ENST00000444408 PODXL2Q9NZ53 605 aa21.47■■□□□ 1.03
AP1S3-207ENST00000444408 RIMBP2O15034 1052 aa21.46■■□□□ 1.03
AP1S3-207ENST00000444408 PPIP5K2O43314 1243 aa21.46■■□□□ 1.03
AP1S3-207ENST00000444408 UFL1O94874 794 aa21.46■■□□□ 1.03
AP1S3-207ENST00000444408 MS4A1P11836 297 aa21.46■■□□□ 1.03
AP1S3-207ENST00000444408 CHRNDQ07001 517 aa21.46■■□□□ 1.03
AP1S3-207ENST00000444408 LRRC24Q50LG9 513 aa21.46■■□□□ 1.03
AP1S3-207ENST00000444408 LARGE2Q8N3Y3 721 aa21.46■■□□□ 1.03
AP1S3-207ENST00000444408 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.46■■□□□ 1.03
AP1S3-207ENST00000444408 NMRK2Q9NPI5 230 aa21.46■■□□□ 1.03
AP1S3-207ENST00000444408 CNNM1Q9NRU3 951 aa21.46■■□□□ 1.03
AP1S3-207ENST00000444408 XDHP47989 1333 aa21.46■■□□□ 1.03
AP1S3-207ENST00000444408 TAF5LO75529 589 aa21.45■■□□□ 1.02
AP1S3-207ENST00000444408 PTPN12Q05209 780 aaKnown RBP21.45■■□□□ 1.02
AP1S3-207ENST00000444408 GGA1Q9UJY5 639 aa21.45■■□□□ 1.02
AP1S3-207ENST00000444408 PA2G4Q9UQ80 394 aaKnown RBP21.45■■□□□ 1.02
AP1S3-207ENST00000444408 TIAM2Q8IVF5 1701 aa21.45■■□□□ 1.02
AP1S3-207ENST00000444408 PNMA6EA0A0J9YXQ4 647 aa21.44■■□□□ 1.02
AP1S3-207ENST00000444408 PDE3AQ14432 1141 aa21.44■■□□□ 1.02
AP1S3-207ENST00000444408 SUPT20HQ8NEM7 779 aa21.44■■□□□ 1.02
AP1S3-207ENST00000444408 RBM46Q8TBY0 533 aaKnown RBP21.44■■□□□ 1.02
AP1S3-207ENST00000444408 KLRK1P26718 216 aa21.43■■□□□ 1.02
AP1S3-207ENST00000444408 KIAA2012Q0VF49 1180 aa21.43■■□□□ 1.02
AP1S3-207ENST00000444408 WASHC4Q2M389 1173 aa21.43■■□□□ 1.02
AP1S3-207ENST00000444408 SIL1Q9H173 461 aa21.43■■□□□ 1.02
AP1S3-207ENST00000444408 HDAC5Q9UQL6 1122 aa21.43■■□□□ 1.02
AP1S3-207ENST00000444408 RIPOR2Q9Y4F9 1068 aa21.43■■□□□ 1.02
AP1S3-207ENST00000444408 ZNF541Q9H0D2 1346 aa21.43■■□□□ 1.02
AP1S3-207ENST00000444408 SRGAP3O43295 1099 aa21.42■■□□□ 1.02
AP1S3-207ENST00000444408 MTX1Q13505 466 aa21.42■■□□□ 1.02
AP1S3-207ENST00000444408 C16orf71Q8IYS4 520 aaPredicted RBP21.42■■□□□ 1.02
AP1S3-207ENST00000444408 DICER1Q9UPY3 1922 aaKnown RBP21.41■■□□□ 1.02
AP1S3-207ENST00000444408 ATP2B4P23634 1241 aa21.41■■□□□ 1.02
AP1S3-207ENST00000444408 DOK7Q18PE1 504 aa21.41■■□□□ 1.02
AP1S3-207ENST00000444408 TXNRD3Q86VQ6 643 aa21.41■■□□□ 1.02
AP1S3-207ENST00000444408 ANKRD2Q9GZV1 360 aa21.41■■□□□ 1.02
AP1S3-207ENST00000444408 KDM2BQ8NHM5 1336 aa21.4■■□□□ 1.02
AP1S3-207ENST00000444408 ATG9AQ7Z3C6 839 aa21.4■■□□□ 1.02
AP1S3-207ENST00000444408 NIM1KQ8IY84 436 aa21.4■■□□□ 1.02
AP1S3-207ENST00000444408 JDP2Q8WYK2 163 aa21.4■■□□□ 1.02
AP1S3-207ENST00000444408 DBNDD1Q9H9R9 158 aa21.4■■□□□ 1.02
AP1S3-207ENST00000444408 ZBTB40Q9NUA8 1239 aa21.4■■□□□ 1.02
AP1S3-207ENST00000444408 DDX19BQ9UMR2 479 aa21.4■■□□□ 1.02
AP1S3-207ENST00000444408 ZNF804BA4D1E1 1349 aa21.39■■□□□ 1.01
AP1S3-207ENST00000444408 YDJCA8MPS7 323 aa21.39■■□□□ 1.01
AP1S3-207ENST00000444408 FZD9O00144 591 aa21.39■■□□□ 1.01
AP1S3-207ENST00000444408 EYA2O00167 538 aa21.39■■□□□ 1.01
AP1S3-207ENST00000444408 FSTL1Q12841 308 aa21.39■■□□□ 1.01
AP1S3-207ENST00000444408 KCNQ5Q9NR82 932 aa21.39■■□□□ 1.01
AP1S3-207ENST00000444408 A0A1B0GUL6 1792 aa21.38■■□□□ 1.01
AP1S3-207ENST00000444408 DDNO94850 711 aaPredicted RBP21.38■■□□□ 1.01
AP1S3-207ENST00000444408 EYA3Q99504 573 aa21.38■■□□□ 1.01
AP1S3-207ENST00000444408 ZC3H12CQ9C0D7 883 aaKnown RBP21.38■■□□□ 1.01
AP1S3-207ENST00000444408 VPS33BQ9H267 617 aa21.38■■□□□ 1.01
AP1S3-207ENST00000444408 LEMD3Q9Y2U8 911 aa21.38■■□□□ 1.01
AP1S3-207ENST00000444408 SUPT16HQ9Y5B9 1047 aaKnown RBP21.38■■□□□ 1.01
AP1S3-207ENST00000444408 WDR90Q96KV7 1748 aa21.38■■□□□ 1.01
AP1S3-207ENST00000444408 ZC3H4Q9UPT8 1303 aaKnown RBP21.37■■□□□ 1.01
AP1S3-207ENST00000444408 IRS2Q9Y4H2 1338 aa21.37■■□□□ 1.01
AP1S3-207ENST00000444408 KCNJ4P48050 445 aa21.37■■□□□ 1.01
AP1S3-207ENST00000444408 ATP8B2P98198 1209 aa21.37■■□□□ 1.01
AP1S3-207ENST00000444408 METTL24Q5JXM2 366 aa21.37■■□□□ 1.01
AP1S3-207ENST00000444408 CEP85Q6P2H3 762 aa21.37■■□□□ 1.01
AP1S3-207ENST00000444408 COPRSQ9NQ92 184 aa21.37■■□□□ 1.01
AP1S3-207ENST00000444408 GLTPD2A6NH11 291 aa21.36■■□□□ 1.01
AP1S3-207ENST00000444408 POLA2Q14181 598 aa21.36■■□□□ 1.01
AP1S3-207ENST00000444408 VGLL2Q8N8G2 317 aa21.36■■□□□ 1.01
AP1S3-207ENST00000444408 ZNRF3Q9ULT6 936 aa21.36■■□□□ 1.01
AP1S3-207ENST00000444408 MROH5Q6ZUA9 1318 aa21.35■■□□□ 1.01
AP1S3-207ENST00000444408 ECE2O60344 883 aa21.35■■□□□ 1.01
AP1S3-207ENST00000444408 RAD17O75943 681 aa21.35■■□□□ 1.01
AP1S3-207ENST00000444408 CXCL9Q07325 125 aa21.35■■□□□ 1.01
AP1S3-207ENST00000444408 CRBNQ96SW2 442 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms