RNA–Protein interactions for RNA: ENST00000443908.5

SF1-210, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-210ENST00000443908 TTLL11Q8NHH1 800 aa16.64■□□□□ 0.25
SF1-210ENST00000443908 ABCC12Q96J65 1359 aa16.64■□□□□ 0.25
SF1-210ENST00000443908 TNRC6CQ9HCJ0 1690 aaKnown RBP16.63■□□□□ 0.25
SF1-210ENST00000443908 HSPA1AP0DMV8 641 aaKnown RBP16.63■□□□□ 0.25
SF1-210ENST00000443908 HSPA1BP0DMV9 641 aaKnown RBP16.63■□□□□ 0.25
SF1-210ENST00000443908 CHADLQ6NUI6 762 aa16.63■□□□□ 0.25
SF1-210ENST00000443908 CHD1LQ86WJ1 897 aa16.63■□□□□ 0.25
SF1-210ENST00000443908 ERC1Q8IUD2 1116 aa16.63■□□□□ 0.25
SF1-210ENST00000443908 FBXO3Q9UK99 471 aa16.63■□□□□ 0.25
SF1-210ENST00000443908 SURF6O75683 361 aaKnown RBP16.62■□□□□ 0.25
SF1-210ENST00000443908 PTPN12Q05209 780 aaKnown RBP16.62■□□□□ 0.25
SF1-210ENST00000443908 SF3B3Q15393 1217 aaKnown RBP16.62■□□□□ 0.25
SF1-210ENST00000443908 NUTM1Q86Y26 1132 aa16.62■□□□□ 0.25
SF1-210ENST00000443908 EXOC6BQ9Y2D4 811 aa16.62■□□□□ 0.25
SF1-210ENST00000443908 HCLS1P14317 486 aaPredicted RBP16.61■□□□□ 0.25
SF1-210ENST00000443908 NPR1P16066 1061 aa16.61■□□□□ 0.25
SF1-210ENST00000443908 IFIT5Q13325 482 aaKnown RBP16.61■□□□□ 0.25
SF1-210ENST00000443908 CCDC57Q2TAC2 916 aa16.61■□□□□ 0.25
SF1-210ENST00000443908 FAM161AQ3B820 660 aa16.61■□□□□ 0.25
SF1-210ENST00000443908 CCDC152Q4G0S7 254 aa16.61■□□□□ 0.25
SF1-210ENST00000443908 ANKRD45Q5TZF3 282 aa16.61■□□□□ 0.25
SF1-210ENST00000443908 KIF1BPQ96EK5 621 aa16.61■□□□□ 0.25
SF1-210ENST00000443908 LRRCC1Q9C099 1032 aa16.61■□□□□ 0.25
SF1-210ENST00000443908 MKRN1Q9UHC7 482 aaKnown RBP16.61■□□□□ 0.25
SF1-210ENST00000443908 CHMP3Q9Y3E7 222 aa16.61■□□□□ 0.25
SF1-210ENST00000443908 LTBP3Q9NS15 1303 aa16.61■□□□□ 0.25
SF1-210ENST00000443908 CCDC88AQ3V6T2 1871 aa16.61■□□□□ 0.25
SF1-210ENST00000443908 IQCA1LA6NCM1 817 aa16.6■□□□□ 0.25
SF1-210ENST00000443908 CIAO1O76071 339 aa16.6■□□□□ 0.25
SF1-210ENST00000443908 CCDC93Q567U6 631 aa16.6■□□□□ 0.25
SF1-210ENST00000443908 ZBTB47Q9UFB7 747 aaPredicted RBP16.6■□□□□ 0.25
SF1-210ENST00000443908 CLEC11AQ9Y240 323 aa16.6■□□□□ 0.25
SF1-210ENST00000443908 ANKRD18BA2A2Z9 1011 aa16.59■□□□□ 0.25
SF1-210ENST00000443908 POTEIP0CG38 1075 aa16.59■□□□□ 0.25
SF1-210ENST00000443908 POTEJP0CG39 1038 aa16.59■□□□□ 0.25
SF1-210ENST00000443908 G3BP1Q13283 466 aaKnown RBP eCLIP16.59■□□□□ 0.252e-7■□□□□ 9.6
SF1-210ENST00000443908 EAPPQ56P03 285 aaPredicted RBP16.59■□□□□ 0.25
SF1-210ENST00000443908 NLRP3Q96P20 1036 aa16.59■□□□□ 0.25
SF1-210ENST00000443908 GREM2Q9H772 168 aa16.59■□□□□ 0.25
SF1-210ENST00000443908 CREBZFQ9NS37 354 aa16.59■□□□□ 0.25
SF1-210ENST00000443908 PA2G4Q9UQ80 394 aaKnown RBP16.59■□□□□ 0.25
SF1-210ENST00000443908 ITGA6P23229 1130 aa16.58■□□□□ 0.24
SF1-210ENST00000443908 RHPN1Q8TCX5 695 aa16.58■□□□□ 0.24
SF1-210ENST00000443908 LNPKQ9C0E8 428 aa16.58■□□□□ 0.24
SF1-210ENST00000443908 ZNF277Q9NRM2 450 aaPredicted RBP16.58■□□□□ 0.24
SF1-210ENST00000443908 EYA2O00167 538 aa16.57■□□□□ 0.24
SF1-210ENST00000443908 ALDH1B1P30837 517 aa16.57■□□□□ 0.24
SF1-210ENST00000443908 IL15P40933 162 aaPredicted RBP16.57■□□□□ 0.24
SF1-210ENST00000443908 OS9Q13438 667 aaPredicted RBP16.57■□□□□ 0.24
SF1-210ENST00000443908 RTKN2Q8IZC4 609 aa16.57■□□□□ 0.24
SF1-210ENST00000443908 C7orf43Q8WVR3 580 aa16.57■□□□□ 0.24
SF1-210ENST00000443908 SASH1O94885 1247 aa16.56■□□□□ 0.24
SF1-210ENST00000443908 PDE4AP27815 886 aa16.56■□□□□ 0.24
SF1-210ENST00000443908 FKBP4Q02790 459 aaKnown RBP eCLIP16.56■□□□□ 0.24
SF1-210ENST00000443908 TAF7LQ5H9L4 462 aa16.56■□□□□ 0.24
SF1-210ENST00000443908 OLFM4Q6UX06 510 aa16.56■□□□□ 0.24
SF1-210ENST00000443908 LDHDQ86WU2 507 aa16.56■□□□□ 0.24
SF1-210ENST00000443908 KLHDC4Q8TBB5 520 aa16.56■□□□□ 0.24
SF1-210ENST00000443908 DLEC1Q9Y238 1755 aa16.56■□□□□ 0.24
SF1-210ENST00000443908 KLRG2A4D1S0 409 aaPredicted RBP16.55■□□□□ 0.24
SF1-210ENST00000443908 CRY2Q49AN0 593 aa16.55■□□□□ 0.24
SF1-210ENST00000443908 C3orf67Q6ZVT6 689 aa16.55■□□□□ 0.24
SF1-210ENST00000443908 ATG9AQ7Z3C6 839 aa16.55■□□□□ 0.24
SF1-210ENST00000443908 CDC5LQ99459 802 aaKnown RBP16.55■□□□□ 0.24
SF1-210ENST00000443908 SIL1Q9H173 461 aa16.55■□□□□ 0.24
SF1-210ENST00000443908 TAF1DQ9H5J8 278 aaPredicted RBP16.55■□□□□ 0.24
SF1-210ENST00000443908 PCNTO95613 3336 aa16.55■□□□□ 0.24
SF1-210ENST00000443908 ANKRD31Q8N7Z5 1873 aa16.54■□□□□ 0.24
SF1-210ENST00000443908 SLX4Q8IY92 1834 aa16.54■□□□□ 0.24
SF1-210ENST00000443908 SALL3Q9BXA9 1300 aa16.54■□□□□ 0.24
SF1-210ENST00000443908 CCDC85AQ96PX6 553 aaPredicted RBP16.54■□□□□ 0.24
SF1-210ENST00000443908 GPR108Q9NPR9 543 aa16.54■□□□□ 0.24
SF1-210ENST00000443908 HACL1Q9UJ83 578 aa16.54■□□□□ 0.24
SF1-210ENST00000443908 APBB1O00213 710 aa16.53■□□□□ 0.24
SF1-210ENST00000443908 SMARCA5O60264 1052 aaPredicted RBP16.53■□□□□ 0.24
SF1-210ENST00000443908 LDHAL6AQ6ZMR3 332 aa16.53■□□□□ 0.24
SF1-210ENST00000443908 CLASRPQ8N2M8 674 aaKnown RBP16.53■□□□□ 0.24
SF1-210ENST00000443908 JDP2Q8WYK2 163 aa16.53■□□□□ 0.24
SF1-210ENST00000443908 ZNF594Q96JF6 807 aaPredicted RBP16.53■□□□□ 0.24
SF1-210ENST00000443908 L3MBTL3Q96JM7 780 aaPredicted RBP16.53■□□□□ 0.24
SF1-210ENST00000443908 TIAM2Q8IVF5 1701 aa16.53■□□□□ 0.24
SF1-210ENST00000443908 TMEM88BA6NKF7 163 aa16.52■□□□□ 0.24
SF1-210ENST00000443908 IGHMBP2P38935 993 aaKnown RBP16.52■□□□□ 0.24
SF1-210ENST00000443908 IARSP41252 1262 aaKnown RBP16.52■□□□□ 0.24
SF1-210ENST00000443908 RGS3P49796 1198 aa16.52■□□□□ 0.24
SF1-210ENST00000443908 SKAP1Q86WV1 359 aa16.52■□□□□ 0.24
SF1-210ENST00000443908 OSBPL3Q9H4L5 887 aa16.52■□□□□ 0.24
SF1-210ENST00000443908 SEC31BQ9NQW1 1179 aa16.52■□□□□ 0.24
SF1-210ENST00000443908 RIPOR2Q9Y4F9 1068 aa16.52■□□□□ 0.24
SF1-210ENST00000443908 AOX1Q06278 1338 aa16.51■□□□□ 0.23
SF1-210ENST00000443908 ZNF541Q9H0D2 1346 aa16.51■□□□□ 0.23
SF1-210ENST00000443908 FER1L6Q2WGJ9 1857 aa16.51■□□□□ 0.23
SF1-210ENST00000443908 HOXA10P31260 410 aaPredicted RBP16.51■□□□□ 0.23
SF1-210ENST00000443908 EPHX2P34913 555 aa16.51■□□□□ 0.23
SF1-210ENST00000443908 LRRC24Q50LG9 513 aa16.51■□□□□ 0.23
SF1-210ENST00000443908 DDX46Q7L014 1031 aaKnown RBP16.51■□□□□ 0.23
SF1-210ENST00000443908 PNMA8AQ86V59 439 aaPredicted RBP16.51■□□□□ 0.23
SF1-210ENST00000443908 ANKRD18AQ8IVF6 992 aa16.51■□□□□ 0.23
SF1-210ENST00000443908 PLEKHM2Q8IWE5 1019 aa16.51■□□□□ 0.23
SF1-210ENST00000443908 RPGRQ92834 1020 aaKnown RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms