RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 EYA3Q99504 573 aa17.4■□□□□ 0.38
LTBR-202ENST00000440421 DBNDD1Q9H9R9 158 aa17.4■□□□□ 0.38
LTBR-202ENST00000440421 PODXL2Q9NZ53 605 aa17.4■□□□□ 0.38
LTBR-202ENST00000440421 GGA1Q9UJY5 639 aa17.4■□□□□ 0.38
LTBR-202ENST00000440421 CHMP3Q9Y3E7 222 aa17.4■□□□□ 0.38
LTBR-202ENST00000440421 YDJCA8MPS7 323 aa17.39■□□□□ 0.37
LTBR-202ENST00000440421 LMOD1P29536 600 aaPredicted RBP17.39■□□□□ 0.37
LTBR-202ENST00000440421 IGHMBP2P38935 993 aaKnown RBP17.39■□□□□ 0.37
LTBR-202ENST00000440421 APLP1P51693 650 aa17.39■□□□□ 0.37
LTBR-202ENST00000440421 FOXO4P98177 505 aa17.39■□□□□ 0.37
LTBR-202ENST00000440421 DOK7Q18PE1 504 aa17.39■□□□□ 0.37
LTBR-202ENST00000440421 CIAPIN1Q6FI81 312 aa17.39■□□□□ 0.37
LTBR-202ENST00000440421 BSDC1Q9NW68 430 aaPredicted RBP17.39■□□□□ 0.37
LTBR-202ENST00000440421 CT47B1P0C2W7 299 aaPredicted RBP17.38■□□□□ 0.37
LTBR-202ENST00000440421 SCNN1DP51172 638 aa17.38■□□□□ 0.37
LTBR-202ENST00000440421 EPHA10Q5JZY3 1008 aa17.38■□□□□ 0.37
LTBR-202ENST00000440421 CHADLQ6NUI6 762 aa17.38■□□□□ 0.37
LTBR-202ENST00000440421 ZC3H12CQ9C0D7 883 aaKnown RBP17.38■□□□□ 0.37
LTBR-202ENST00000440421 MINPP1Q9UNW1 487 aa17.38■□□□□ 0.37
LTBR-202ENST00000440421 CLEC11AQ9Y240 323 aa17.38■□□□□ 0.37
LTBR-202ENST00000440421 XDHP47989 1333 aa17.38■□□□□ 0.37
LTBR-202ENST00000440421 ANKRD18BA2A2Z9 1011 aa17.37■□□□□ 0.37
LTBR-202ENST00000440421 G3V3G9 751 aa17.37■□□□□ 0.37
LTBR-202ENST00000440421 ECE2O60344 883 aa17.37■□□□□ 0.37
LTBR-202ENST00000440421 EPS15P42566 896 aa17.37■□□□□ 0.37
LTBR-202ENST00000440421 HTRA3P83110 453 aa17.37■□□□□ 0.37
LTBR-202ENST00000440421 DCAF8Q5TAQ9 597 aa17.37■□□□□ 0.37
LTBR-202ENST00000440421 LMBR1LQ6UX01 489 aa17.37■□□□□ 0.37
LTBR-202ENST00000440421 LDHDQ86WU2 507 aa17.37■□□□□ 0.37
LTBR-202ENST00000440421 MPHOSPH8Q99549 860 aa17.37■□□□□ 0.37
LTBR-202ENST00000440421 WTIPA6NIX2 430 aaPredicted RBP17.36■□□□□ 0.37
LTBR-202ENST00000440421 NBPF7P0C2Y1 421 aaPredicted RBP17.36■□□□□ 0.37
LTBR-202ENST00000440421 ATP2B4P23634 1241 aa17.36■□□□□ 0.37
LTBR-202ENST00000440421 GMPSP49915 693 aaPredicted RBP17.36■□□□□ 0.37
LTBR-202ENST00000440421 IFIT5Q13325 482 aaKnown RBP17.36■□□□□ 0.37
LTBR-202ENST00000440421 TNIP1Q15025 636 aa17.36■□□□□ 0.37
LTBR-202ENST00000440421 PNMA8AQ86V59 439 aaPredicted RBP17.35■□□□□ 0.37
LTBR-202ENST00000440421 SUCLG2Q96I99 432 aa17.35■□□□□ 0.37
LTBR-202ENST00000440421 KCNQ5Q9NR82 932 aa17.35■□□□□ 0.37
LTBR-202ENST00000440421 NOB1Q9ULX3 412 aaKnown RBP17.35■□□□□ 0.37
LTBR-202ENST00000440421 PSMD14O00487 310 aa17.34■□□□□ 0.37
LTBR-202ENST00000440421 CCT4P50991 539 aaKnown RBP17.34■□□□□ 0.37
LTBR-202ENST00000440421 RARSP54136 660 aaKnown RBP17.34■□□□□ 0.37
LTBR-202ENST00000440421 GPRC5DQ9NZD1 345 aa17.34■□□□□ 0.37
LTBR-202ENST00000440421 UTYO14607 1347 aa17.33■□□□□ 0.36
LTBR-202ENST00000440421 CCDC57Q2TAC2 916 aa17.33■□□□□ 0.36
LTBR-202ENST00000440421 TAF7LQ5H9L4 462 aa17.33■□□□□ 0.36
LTBR-202ENST00000440421 ZNF594Q96JF6 807 aaPredicted RBP17.33■□□□□ 0.36
LTBR-202ENST00000440421 ZBTB12Q9Y330 459 aaPredicted RBP17.33■□□□□ 0.36
LTBR-202ENST00000440421 ADAMTSL1Q8N6G6 1762 aa17.33■□□□□ 0.36
LTBR-202ENST00000440421 CHRNDQ07001 517 aa17.32■□□□□ 0.36
LTBR-202ENST00000440421 MAP1SQ66K74 1059 aaPredicted RBP17.32■□□□□ 0.36
LTBR-202ENST00000440421 KAZALD1Q96I82 304 aa17.32■□□□□ 0.36
LTBR-202ENST00000440421 ANKRD2Q9GZV1 360 aa17.32■□□□□ 0.36
LTBR-202ENST00000440421 SHTN1A0MZ66 631 aa17.31■□□□□ 0.36
LTBR-202ENST00000440421 USP50Q70EL3 339 aaPredicted RBP17.31■□□□□ 0.36
LTBR-202ENST00000440421 HELBQ8NG08 1087 aaPredicted RBP17.31■□□□□ 0.36
LTBR-202ENST00000440421 API5Q9BZZ5 524 aaKnown RBP17.31■□□□□ 0.36
LTBR-202ENST00000440421 USP44Q9H0E7 712 aa17.31■□□□□ 0.36
LTBR-202ENST00000440421 BICC1Q9H694 974 aaKnown RBP17.31■□□□□ 0.36
LTBR-202ENST00000440421 ADARB2Q9NS39 739 aaKnown RBP17.31■□□□□ 0.36
LTBR-202ENST00000440421 LEMD3Q9Y2U8 911 aa17.31■□□□□ 0.36
LTBR-202ENST00000440421 SCN9AQ15858 1988 aa17.31■□□□□ 0.36
LTBR-202ENST00000440421 MED23Q9ULK4 1368 aa17.3■□□□□ 0.36
LTBR-202ENST00000440421 ZNF804BA4D1E1 1349 aa17.3■□□□□ 0.36
LTBR-202ENST00000440421 TAF5LO75529 589 aa17.3■□□□□ 0.36
LTBR-202ENST00000440421 KCNJ4P48050 445 aa17.3■□□□□ 0.36
LTBR-202ENST00000440421 BRPF1P55201 1214 aaPredicted RBP17.3■□□□□ 0.36
LTBR-202ENST00000440421 CNOT7Q9UIV1 285 aaKnown RBP17.3■□□□□ 0.36
LTBR-202ENST00000440421 ITGBL1O95965 494 aaPredicted RBP17.29■□□□□ 0.36
LTBR-202ENST00000440421 KLRK1P26718 216 aa17.29■□□□□ 0.36
LTBR-202ENST00000440421 LDHAL6AQ6ZMR3 332 aa17.29■□□□□ 0.36
LTBR-202ENST00000440421 TXNRD3Q86VQ6 643 aa17.29■□□□□ 0.36
LTBR-202ENST00000440421 MICALL2Q8IY33 904 aa17.29■□□□□ 0.36
LTBR-202ENST00000440421 CNTROBQ8N137 903 aa17.29■□□□□ 0.36
LTBR-202ENST00000440421 CNNM1Q9NRU3 951 aa17.29■□□□□ 0.36
LTBR-202ENST00000440421 KIF16BQ96L93 1317 aa17.28■□□□□ 0.36
LTBR-202ENST00000440421 H7C1D1 291 aa17.28■□□□□ 0.36
LTBR-202ENST00000440421 SNAP23O00161 211 aa17.28■□□□□ 0.36
LTBR-202ENST00000440421 PLIN1O60240 522 aa17.28■□□□□ 0.36
LTBR-202ENST00000440421 BCAR3O75815 825 aa17.28■□□□□ 0.36
LTBR-202ENST00000440421 DNAJC5GQ8N7S2 189 aa17.28■□□□□ 0.36
LTBR-202ENST00000440421 ANKRD44Q8N8A2 993 aa17.28■□□□□ 0.36
LTBR-202ENST00000440421 ZBED9Q6R2W3 1325 aa17.27■□□□□ 0.36
LTBR-202ENST00000440421 PASKQ96RG2 1323 aa17.27■□□□□ 0.36
LTBR-202ENST00000440421 VIL1P09327 827 aaKnown RBP17.27■□□□□ 0.36
LTBR-202ENST00000440421 RABL6Q3YEC7 729 aaPredicted RBP17.27■□□□□ 0.36
LTBR-202ENST00000440421 PODNQ7Z5L7 613 aa17.27■□□□□ 0.36
LTBR-202ENST00000440421 TRPM4Q8TD43 1214 aa17.27■□□□□ 0.36
LTBR-202ENST00000440421 DPF2Q92785 391 aa17.27■□□□□ 0.36
LTBR-202ENST00000440421 FRAT1Q92837 279 aaPredicted RBP17.27■□□□□ 0.36
LTBR-202ENST00000440421 A0A1B0GUL6 1792 aa17.27■□□□□ 0.35
LTBR-202ENST00000440421 RPS12P25398 132 aaKnown RBP17.26■□□□□ 0.35
LTBR-202ENST00000440421 HIRAP54198 1017 aaPredicted RBP17.26■□□□□ 0.35
LTBR-202ENST00000440421 RBM26Q5T8P6 1007 aaKnown RBP17.26■□□□□ 0.35
LTBR-202ENST00000440421 SAMD7Q7Z3H4 446 aa17.26■□□□□ 0.35
LTBR-202ENST00000440421 FBXW7Q969H0 707 aa17.26■□□□□ 0.35
LTBR-202ENST00000440421 PUS3Q9BZE2 481 aaKnown RBP17.26■□□□□ 0.35
LTBR-202ENST00000440421 CEP350Q5VT06 3117 aa17.25■□□□□ 0.35
LTBR-202ENST00000440421 USP17L3A6NCW0 530 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms