RNA–Protein interactions for RNA: ENST00000439681.1

UBR3-205, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-205ENST00000439681 CNNM1Q9NRU3 951 aa9.26□□□□□ -0.93
UBR3-205ENST00000439681 MINPP1Q9UNW1 487 aa9.26□□□□□ -0.93
UBR3-205ENST00000439681 CD2APQ9Y5K6 639 aa9.26□□□□□ -0.93
UBR3-205ENST00000439681 ALDH1B1P30837 517 aa9.25□□□□□ -0.93
UBR3-205ENST00000439681 VGLL2Q8N8G2 317 aa9.25□□□□□ -0.93
UBR3-205ENST00000439681 ZNF622Q969S3 477 aaKnown RBP eCLIP9.25□□□□□ -0.932e-7■■□□□ 12.4
UBR3-205ENST00000439681 IL1RAPL2Q9NP60 686 aa9.25□□□□□ -0.93
UBR3-205ENST00000439681 LAMB2P55268 1798 aa9.25□□□□□ -0.93
UBR3-205ENST00000439681 PDE4AP27815 886 aa9.24□□□□□ -0.93
UBR3-205ENST00000439681 HELBQ8NG08 1087 aaPredicted RBP9.24□□□□□ -0.93
UBR3-205ENST00000439681 LNPKQ9C0E8 428 aa9.24□□□□□ -0.93
UBR3-205ENST00000439681 CEP126Q9P2H0 1117 aa9.24□□□□□ -0.93
UBR3-205ENST00000439681 MROH5Q6ZUA9 1318 aa9.24□□□□□ -0.93
UBR3-205ENST00000439681 WTIPA6NIX2 430 aaPredicted RBP9.24□□□□□ -0.93
UBR3-205ENST00000439681 CHRNDQ07001 517 aa9.24□□□□□ -0.93
UBR3-205ENST00000439681 METTL24Q5JXM2 366 aa9.24□□□□□ -0.93
UBR3-205ENST00000439681 C7orf43Q8WVR3 580 aa9.24□□□□□ -0.93
UBR3-205ENST00000439681 CNKSR1Q969H4 720 aa9.24□□□□□ -0.93
UBR3-205ENST00000439681 EAF2Q96CJ1 260 aaPredicted RBP9.24□□□□□ -0.93
UBR3-205ENST00000439681 TAF5LO75529 589 aa9.23□□□□□ -0.93
UBR3-205ENST00000439681 PDE8BO95263 885 aa9.23□□□□□ -0.93
UBR3-205ENST00000439681 SP8Q8IXZ3 490 aa9.23□□□□□ -0.93
UBR3-205ENST00000439681 OTUD7AQ8TE49 926 aaPredicted RBP9.23□□□□□ -0.93
UBR3-205ENST00000439681 GPR108Q9NPR9 543 aa9.23□□□□□ -0.93
UBR3-205ENST00000439681 PPP1R1BQ9UD71 204 aaPredicted RBP9.23□□□□□ -0.93
UBR3-205ENST00000439681 ATP6V0A2Q9Y487 856 aa9.23□□□□□ -0.93
UBR3-205ENST00000439681 ANKRD31Q8N7Z5 1873 aa9.23□□□□□ -0.93
UBR3-205ENST00000439681 SNAP23O00161 211 aa9.23□□□□□ -0.93
UBR3-205ENST00000439681 PPEF1O14829 653 aaPredicted RBP9.23□□□□□ -0.93
UBR3-205ENST00000439681 FGFR2P21802 821 aa9.23□□□□□ -0.93
UBR3-205ENST00000439681 TIMM10P62072 90 aa9.23□□□□□ -0.93
UBR3-205ENST00000439681 TNNI3KQ59H18 835 aa9.23□□□□□ -0.93
UBR3-205ENST00000439681 PRPF40BQ6NWY9 871 aaKnown RBP9.23□□□□□ -0.93
UBR3-205ENST00000439681 OLFM4Q6UX06 510 aa9.23□□□□□ -0.93
UBR3-205ENST00000439681 TMC4Q7Z404 712 aa9.23□□□□□ -0.93
UBR3-205ENST00000439681 FPGT-TNNI3KV9GXZ4 949 aa9.23□□□□□ -0.93
UBR3-205ENST00000439681 LRP5O75197 1615 aa9.23□□□□□ -0.93
UBR3-205ENST00000439681 SALL3Q9BXA9 1300 aa9.22□□□□□ -0.93
UBR3-205ENST00000439681 GPSM2P81274 684 aa9.22□□□□□ -0.93
UBR3-205ENST00000439681 CLASRPQ8N2M8 674 aaKnown RBP9.22□□□□□ -0.93
UBR3-205ENST00000439681 TTLL6Q8N841 843 aa9.22□□□□□ -0.93
UBR3-205ENST00000439681 NLGN2Q8NFZ4 835 aa9.22□□□□□ -0.93
UBR3-205ENST00000439681 AACSQ86V21 672 aa9.22□□□□□ -0.93
UBR3-205ENST00000439681 KLHL34Q8N239 644 aa9.22□□□□□ -0.93
UBR3-205ENST00000439681 FHDC1Q9C0D6 1143 aaPredicted RBP9.22□□□□□ -0.93
UBR3-205ENST00000439681 ANKRD2Q9GZV1 360 aa9.22□□□□□ -0.93
UBR3-205ENST00000439681 CCDC8Q9H0W5 538 aaPredicted RBP9.22□□□□□ -0.93
UBR3-205ENST00000439681 BCL11AQ9H165 835 aa9.22□□□□□ -0.93
UBR3-205ENST00000439681 TLR7Q9NYK1 1049 aaKnown RBP9.22□□□□□ -0.93
UBR3-205ENST00000439681 PIM2Q9P1W9 311 aa9.22□□□□□ -0.93
UBR3-205ENST00000439681 PLEKHM2Q8IWE5 1019 aa9.21□□□□□ -0.94
UBR3-205ENST00000439681 PODXL2Q9NZ53 605 aa9.21□□□□□ -0.94
UBR3-205ENST00000439681 AKAP2Q9Y2D5 859 aa9.21□□□□□ -0.94
UBR3-205ENST00000439681 A0A1B0GUL7 405 aa9.2□□□□□ -0.94
UBR3-205ENST00000439681 ADORA1P30542 326 aa9.2□□□□□ -0.94
UBR3-205ENST00000439681 PUM3Q15397 648 aaKnown RBP9.2□□□□□ -0.94
UBR3-205ENST00000439681 ATP2B3Q16720 1220 aa9.2□□□□□ -0.94
UBR3-205ENST00000439681 LPIN2Q92539 896 aa9.2□□□□□ -0.94
UBR3-205ENST00000439681 DBNDD2Q9BQY9 259 aa9.2□□□□□ -0.94
UBR3-205ENST00000439681 ZNF219Q9P2Y4 722 aaPredicted RBP9.2□□□□□ -0.94
UBR3-205ENST00000439681 ZBTB47Q9UFB7 747 aaPredicted RBP9.2□□□□□ -0.94
UBR3-205ENST00000439681 STAP2Q9UGK3 403 aa9.2□□□□□ -0.94
UBR3-205ENST00000439681 DBNLQ9UJU6 430 aaKnown RBP9.2□□□□□ -0.94
UBR3-205ENST00000439681 IRS2Q9Y4H2 1338 aa9.2□□□□□ -0.94
UBR3-205ENST00000439681 COL11A2P13942 1736 aaPredicted RBP9.2□□□□□ -0.94
UBR3-205ENST00000439681 C21orf2O43822 256 aa9.2□□□□□ -0.94
UBR3-205ENST00000439681 IFIT2P09913 472 aaKnown RBP9.2□□□□□ -0.94
UBR3-205ENST00000439681 UBE4AQ14139 1066 aa9.2□□□□□ -0.94
UBR3-205ENST00000439681 NEUROD6Q96NK8 337 aa9.2□□□□□ -0.94
UBR3-205ENST00000439681 SYT17Q9BSW7 474 aa9.2□□□□□ -0.94
UBR3-205ENST00000439681 ANKIB1Q9P2G1 1089 aa9.2□□□□□ -0.94
UBR3-205ENST00000439681 POLLQ9UGP5 575 aa9.2□□□□□ -0.94
UBR3-205ENST00000439681 NSFL1CQ9UNZ2 370 aaKnown RBP9.2□□□□□ -0.94
UBR3-205ENST00000439681 LEMD3Q9Y2U8 911 aa9.2□□□□□ -0.94
UBR3-205ENST00000439681 XDHP47989 1333 aa9.19□□□□□ -0.94
UBR3-205ENST00000439681 MYH3P11055 1940 aa9.19□□□□□ -0.94
UBR3-205ENST00000439681 PDE1AP54750 535 aa9.19□□□□□ -0.94
UBR3-205ENST00000439681 DALRD3Q5D0E6 543 aaKnown RBP9.19□□□□□ -0.94
UBR3-205ENST00000439681 TBC1D16Q8TBP0 767 aa9.19□□□□□ -0.94
UBR3-205ENST00000439681 XAGE2Q96GT9 111 aa9.19□□□□□ -0.94
UBR3-205ENST00000439681 OSBPL3Q9H4L5 887 aa9.19□□□□□ -0.94
UBR3-205ENST00000439681 ZNF609O15014 1411 aa9.19□□□□□ -0.94
UBR3-205ENST00000439681 ZNF804BA4D1E1 1349 aa9.19□□□□□ -0.94
UBR3-205ENST00000439681 KIF13BQ9NQT8 1826 aa9.19□□□□□ -0.94
UBR3-205ENST00000439681 ATP2B4P23634 1241 aa9.19□□□□□ -0.94
UBR3-205ENST00000439681 KLRK1P26718 216 aa9.19□□□□□ -0.94
UBR3-205ENST00000439681 RGS3P49796 1198 aa9.19□□□□□ -0.94
UBR3-205ENST00000439681 TSHZ3Q63HK5 1081 aa9.19□□□□□ -0.94
UBR3-205ENST00000439681 CC2D2BQ6DHV5 1058 aa9.19□□□□□ -0.94
UBR3-205ENST00000439681 MPNDQ8N594 471 aa9.19□□□□□ -0.94
UBR3-205ENST00000439681 WWC3Q9ULE0 1092 aa9.19□□□□□ -0.94
UBR3-205ENST00000439681 SNED1Q8TER0 1413 aa9.18□□□□□ -0.94
UBR3-205ENST00000439681 TAF1P21675 1872 aa9.18□□□□□ -0.94
UBR3-205ENST00000439681 IFIT1P09914 478 aaKnown RBP9.18□□□□□ -0.94
UBR3-205ENST00000439681 SLC5A1P13866 664 aa9.18□□□□□ -0.94
UBR3-205ENST00000439681 MX1P20591 662 aa9.18□□□□□ -0.94
UBR3-205ENST00000439681 C15orf52Q6ZUT6 534 aaKnown RBP9.18□□□□□ -0.94
UBR3-205ENST00000439681 TXNRD3Q86VQ6 643 aa9.18□□□□□ -0.94
UBR3-205ENST00000439681 GPR101Q96P66 508 aaPredicted RBP9.18□□□□□ -0.94
UBR3-205ENST00000439681 RTFDC1Q9BY42 306 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms