RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 IFT57Q9NWB7 429 aa11.86□□□□□ -0.51
AC011228.1-201ENST00000439027 GPRC5DQ9NZD1 345 aa11.86□□□□□ -0.51
AC011228.1-201ENST00000439027 C6orf229H3BNL8 230 aa11.85□□□□□ -0.51
AC011228.1-201ENST00000439027 TRAF5O00463 557 aa11.85□□□□□ -0.51
AC011228.1-201ENST00000439027 IRS4O14654 1257 aaPredicted RBP11.85□□□□□ -0.51
AC011228.1-201ENST00000439027 ZNF853P0CG23 659 aa11.85□□□□□ -0.51
AC011228.1-201ENST00000439027 GRM1Q13255 1194 aa11.85□□□□□ -0.51
AC011228.1-201ENST00000439027 CELF1Q92879 486 aaKnown RBP11.85□□□□□ -0.51
AC011228.1-201ENST00000439027 NSFL1CQ9UNZ2 370 aaKnown RBP11.85□□□□□ -0.51
AC011228.1-201ENST00000439027 RASSF10A6NK89 507 aa11.84□□□□□ -0.51
AC011228.1-201ENST00000439027 RIMBP2O15034 1052 aa11.84□□□□□ -0.51
AC011228.1-201ENST00000439027 CTCFP49711 727 aaPredicted RBP11.84□□□□□ -0.51
AC011228.1-201ENST00000439027 HNRNPUQ00839 825 aaKnown RBP eCLIP11.84□□□□□ -0.51
AC011228.1-201ENST00000439027 TRIM28Q13263 835 aaKnown RBP11.84□□□□□ -0.51
AC011228.1-201ENST00000439027 SF3B3Q15393 1217 aaKnown RBP11.84□□□□□ -0.51
AC011228.1-201ENST00000439027 WASHC4Q2M389 1173 aa11.84□□□□□ -0.51
AC011228.1-201ENST00000439027 MYD88Q99836 296 aa11.84□□□□□ -0.51
AC011228.1-201ENST00000439027 PHAXQ9H814 394 aaKnown RBP11.84□□□□□ -0.51
AC011228.1-201ENST00000439027 ANKRD36CQ5JPF3 1778 aa11.84□□□□□ -0.51
AC011228.1-201ENST00000439027 WDR33Q9C0J8 1336 aaKnown RBP11.84□□□□□ -0.51
AC011228.1-201ENST00000439027 LTBP1Q14766 1721 aa11.83□□□□□ -0.52
AC011228.1-201ENST00000439027 ADAMTSL1Q8N6G6 1762 aa11.83□□□□□ -0.52
AC011228.1-201ENST00000439027 H7C1D1 291 aa11.83□□□□□ -0.52
AC011228.1-201ENST00000439027 RPS8P62241 208 aaKnown RBP11.83□□□□□ -0.52
AC011228.1-201ENST00000439027 GPSM2P81274 684 aa11.83□□□□□ -0.52
AC011228.1-201ENST00000439027 C8orf58Q8NAV2 365 aa11.83□□□□□ -0.52
AC011228.1-201ENST00000439027 JARID2Q92833 1246 aaPredicted RBP11.83□□□□□ -0.52
AC011228.1-201ENST00000439027 WBP1LQ9NX94 342 aa11.83□□□□□ -0.52
AC011228.1-201ENST00000439027 CNOT7Q9UIV1 285 aaKnown RBP11.83□□□□□ -0.52
AC011228.1-201ENST00000439027 TAF1P21675 1872 aa11.83□□□□□ -0.52
AC011228.1-201ENST00000439027 LAMB2P55268 1798 aa11.82□□□□□ -0.52
AC011228.1-201ENST00000439027 YDJCA8MPS7 323 aa11.82□□□□□ -0.52
AC011228.1-201ENST00000439027 HSP90B1P14625 803 aaKnown RBP11.82□□□□□ -0.52
AC011228.1-201ENST00000439027 DOK7Q18PE1 504 aa11.82□□□□□ -0.52
AC011228.1-201ENST00000439027 ZBTB38Q8NAP3 1195 aaPredicted RBP11.82□□□□□ -0.52
AC011228.1-201ENST00000439027 SPOCK2Q92563 424 aa11.82□□□□□ -0.52
AC011228.1-201ENST00000439027 CAPNS2Q96L46 248 aa11.82□□□□□ -0.52
AC011228.1-201ENST00000439027 CHMP4AQ9BY43 222 aa11.82□□□□□ -0.52
AC011228.1-201ENST00000439027 GLIS2Q9BZE0 524 aaPredicted RBP11.82□□□□□ -0.52
AC011228.1-201ENST00000439027 DBNDD1Q9H9R9 158 aa11.82□□□□□ -0.52
AC011228.1-201ENST00000439027 SHTN1A0MZ66 631 aa11.81□□□□□ -0.52
AC011228.1-201ENST00000439027 G3V3G9 751 aa11.81□□□□□ -0.52
AC011228.1-201ENST00000439027 CELF2O95319 508 aaKnown RBP11.81□□□□□ -0.52
AC011228.1-201ENST00000439027 DDX58O95786 925 aaKnown RBP11.81□□□□□ -0.52
AC011228.1-201ENST00000439027 ECE1P42892 770 aa11.81□□□□□ -0.52
AC011228.1-201ENST00000439027 LBX1P52954 281 aa11.81□□□□□ -0.52
AC011228.1-201ENST00000439027 MAP2K1Q02750 393 aaPredicted RBP11.81□□□□□ -0.52
AC011228.1-201ENST00000439027 GSE1Q14687 1217 aa11.81□□□□□ -0.52
AC011228.1-201ENST00000439027 CCDC30Q5VVM6 783 aa11.81□□□□□ -0.52
AC011228.1-201ENST00000439027 CST9Q5W186 159 aa11.81□□□□□ -0.52
AC011228.1-201ENST00000439027 CYP4F22Q6NT55 531 aa11.81□□□□□ -0.52
AC011228.1-201ENST00000439027 MICALL2Q8IY33 904 aa11.81□□□□□ -0.52
AC011228.1-201ENST00000439027 TRPM4Q8TD43 1214 aa11.81□□□□□ -0.52
AC011228.1-201ENST00000439027 GPR101Q96P66 508 aaPredicted RBP11.81□□□□□ -0.52
AC011228.1-201ENST00000439027 CCDC85AQ96PX6 553 aaPredicted RBP11.81□□□□□ -0.52
AC011228.1-201ENST00000439027 EYA3Q99504 573 aa11.81□□□□□ -0.52
AC011228.1-201ENST00000439027 ZNF408Q9H9D4 720 aa11.81□□□□□ -0.52
AC011228.1-201ENST00000439027 PRDM10Q9NQV6 1147 aa11.81□□□□□ -0.52
AC011228.1-201ENST00000439027 SEC31BQ9NQW1 1179 aa11.81□□□□□ -0.52
AC011228.1-201ENST00000439027 CWC25Q9NXE8 425 aaPredicted RBP11.81□□□□□ -0.52
AC011228.1-201ENST00000439027 POLLQ9UGP5 575 aa11.81□□□□□ -0.52
AC011228.1-201ENST00000439027 PCDHB13Q9Y5F0 798 aa11.81□□□□□ -0.52
AC011228.1-201ENST00000439027 PSMD14O00487 310 aa11.8□□□□□ -0.52
AC011228.1-201ENST00000439027 HIRAP54198 1017 aaPredicted RBP11.8□□□□□ -0.52
AC011228.1-201ENST00000439027 CCDC152Q4G0S7 254 aa11.8□□□□□ -0.52
AC011228.1-201ENST00000439027 RBM26Q5T8P6 1007 aaKnown RBP11.8□□□□□ -0.52
AC011228.1-201ENST00000439027 ASTLQ6HA08 431 aaPredicted RBP11.8□□□□□ -0.52
AC011228.1-201ENST00000439027 CCDC191Q8NCU4 936 aa11.8□□□□□ -0.52
AC011228.1-201ENST00000439027 TBC1D16Q8TBP0 767 aa11.8□□□□□ -0.52
AC011228.1-201ENST00000439027 BEGAINQ9BUH8 593 aa11.8□□□□□ -0.52
AC011228.1-201ENST00000439027 ANKIB1Q9P2G1 1089 aa11.8□□□□□ -0.52
AC011228.1-201ENST00000439027 CDHR2Q9BYE9 1310 aa11.8□□□□□ -0.52
AC011228.1-201ENST00000439027 ECE2O60344 883 aa11.79□□□□□ -0.52
AC011228.1-201ENST00000439027 UFL1O94874 794 aa11.79□□□□□ -0.52
AC011228.1-201ENST00000439027 PCCAP05165 728 aaPredicted RBP11.79□□□□□ -0.52
AC011228.1-201ENST00000439027 TBC1D10BQ4KMP7 808 aaPredicted RBP11.79□□□□□ -0.52
AC011228.1-201ENST00000439027 CDC37L1Q7L3B6 337 aa11.79□□□□□ -0.52
AC011228.1-201ENST00000439027 USP48Q86UV5 1035 aa11.79□□□□□ -0.52
AC011228.1-201ENST00000439027 TSPYL6Q8N831 410 aa11.79□□□□□ -0.52
AC011228.1-201ENST00000439027 ZC3H15Q8WU90 426 aaKnown RBP11.79□□□□□ -0.52
AC011228.1-201ENST00000439027 TSR2Q969E8 191 aaKnown RBP11.79□□□□□ -0.52
AC011228.1-201ENST00000439027 METTL22Q9BUU2 404 aaPredicted RBP11.79□□□□□ -0.52
AC011228.1-201ENST00000439027 STK31Q9BXU1 1019 aa11.79□□□□□ -0.52
AC011228.1-201ENST00000439027 ZC3H12CQ9C0D7 883 aaKnown RBP11.79□□□□□ -0.52
AC011228.1-201ENST00000439027 KCNQ5Q9NR82 932 aa11.79□□□□□ -0.52
AC011228.1-201ENST00000439027 TRPC6Q9Y210 931 aa11.79□□□□□ -0.52
AC011228.1-201ENST00000439027 MAP3K2Q9Y2U5 619 aa11.79□□□□□ -0.52
AC011228.1-201ENST00000439027 SALL2Q9Y467 1007 aaPredicted RBP11.79□□□□□ -0.52
AC011228.1-201ENST00000439027 TLL2Q9Y6L7 1015 aa11.79□□□□□ -0.52
AC011228.1-201ENST00000439027 DDX60Q8IY21 1712 aaKnown RBP11.78□□□□□ -0.52
AC011228.1-201ENST00000439027 ATMINO43313 823 aaPredicted RBP11.78□□□□□ -0.52
AC011228.1-201ENST00000439027 PDE8AO60658 829 aa11.78□□□□□ -0.52
AC011228.1-201ENST00000439027 AOC2O75106 756 aa11.78□□□□□ -0.52
AC011228.1-201ENST00000439027 HSPA8P11142 646 aaKnown RBP11.78□□□□□ -0.52
AC011228.1-201ENST00000439027 PYGBP11216 843 aa11.78□□□□□ -0.52
AC011228.1-201ENST00000439027 SAMD7Q7Z3H4 446 aa11.78□□□□□ -0.52
AC011228.1-201ENST00000439027 DPF2Q92785 391 aa11.78□□□□□ -0.52
AC011228.1-201ENST00000439027 PGAP2Q9UHJ9 254 aa11.78□□□□□ -0.52
AC011228.1-201ENST00000439027 GGA1Q9UJY5 639 aa11.78□□□□□ -0.52
AC011228.1-201ENST00000439027 TRPM7Q96QT4 1865 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms