RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 C6orf229H3BNL8 230 aa16.77■□□□□ 0.28
LINC00399-201ENST00000439008 SNAP23O00161 211 aa16.77■□□□□ 0.28
LINC00399-201ENST00000439008 POTEIP0CG38 1075 aa16.77■□□□□ 0.28
LINC00399-201ENST00000439008 POTEJP0CG39 1038 aa16.77■□□□□ 0.28
LINC00399-201ENST00000439008 TRIM27P14373 513 aa16.77■□□□□ 0.28
LINC00399-201ENST00000439008 VEGFAP15692 232 aaPredicted RBP16.77■□□□□ 0.28
LINC00399-201ENST00000439008 CXCL9Q07325 125 aa16.77■□□□□ 0.28
LINC00399-201ENST00000439008 WASHC4Q2M389 1173 aa16.77■□□□□ 0.28
LINC00399-201ENST00000439008 NIM1KQ8IY84 436 aa16.77■□□□□ 0.28
LINC00399-201ENST00000439008 L3MBTL3Q96JM7 780 aaPredicted RBP16.77■□□□□ 0.28
LINC00399-201ENST00000439008 SCN4AP35499 1836 aa16.76■□□□□ 0.27
LINC00399-201ENST00000439008 UFL1O94874 794 aa16.76■□□□□ 0.27
LINC00399-201ENST00000439008 DOK7Q18PE1 504 aa16.76■□□□□ 0.27
LINC00399-201ENST00000439008 RABL6Q3YEC7 729 aaPredicted RBP16.76■□□□□ 0.27
LINC00399-201ENST00000439008 ARHGAP45Q92619 1136 aa16.76■□□□□ 0.27
LINC00399-201ENST00000439008 API5Q9BZZ5 524 aaKnown RBP16.76■□□□□ 0.27
LINC00399-201ENST00000439008 DBNDD1Q9H9R9 158 aa16.76■□□□□ 0.27
LINC00399-201ENST00000439008 ANKIB1Q9P2G1 1089 aa16.76■□□□□ 0.27
LINC00399-201ENST00000439008 ZNRF3Q9ULT6 936 aa16.76■□□□□ 0.27
LINC00399-201ENST00000439008 CHMP3Q9Y3E7 222 aa16.76■□□□□ 0.27
LINC00399-201ENST00000439008 XDHP47989 1333 aa16.75■□□□□ 0.27
LINC00399-201ENST00000439008 KIF16BQ96L93 1317 aa16.75■□□□□ 0.27
LINC00399-201ENST00000439008 ANKRD18BA2A2Z9 1011 aa16.75■□□□□ 0.27
LINC00399-201ENST00000439008 TOMM70O94826 608 aa16.75■□□□□ 0.27
LINC00399-201ENST00000439008 TXNRD3Q86VQ6 643 aa16.75■□□□□ 0.27
LINC00399-201ENST00000439008 FRAT1Q92837 279 aaPredicted RBP16.75■□□□□ 0.27
LINC00399-201ENST00000439008 GGA1Q9UJY5 639 aa16.75■□□□□ 0.27
LINC00399-201ENST00000439008 GJA3Q9Y6H8 435 aa16.75■□□□□ 0.27
LINC00399-201ENST00000439008 RAD17O75943 681 aa16.74■□□□□ 0.27
LINC00399-201ENST00000439008 KLRK1P26718 216 aa16.74■□□□□ 0.27
LINC00399-201ENST00000439008 CCT4P50991 539 aaKnown RBP16.74■□□□□ 0.27
LINC00399-201ENST00000439008 SCNN1DP51172 638 aa16.74■□□□□ 0.27
LINC00399-201ENST00000439008 EIF6P56537 245 aaKnown RBP16.74■□□□□ 0.27
LINC00399-201ENST00000439008 IFIT5Q13325 482 aaKnown RBP16.74■□□□□ 0.27
LINC00399-201ENST00000439008 INTS3Q68E01 1043 aaKnown RBP16.74■□□□□ 0.27
LINC00399-201ENST00000439008 GPC2Q8N158 579 aa16.74■□□□□ 0.27
LINC00399-201ENST00000439008 HELBQ8NG08 1087 aaPredicted RBP16.74■□□□□ 0.27
LINC00399-201ENST00000439008 CLUAP1Q96AJ1 413 aa16.74■□□□□ 0.27
LINC00399-201ENST00000439008 MEIS3Q99687 375 aa16.74■□□□□ 0.27
LINC00399-201ENST00000439008 PUS3Q9BZE2 481 aaKnown RBP16.74■□□□□ 0.27
LINC00399-201ENST00000439008 ZNF646O15015 1829 aaPredicted RBP16.73■□□□□ 0.27
LINC00399-201ENST00000439008 IGHMBP2P38935 993 aaKnown RBP16.73■□□□□ 0.27
LINC00399-201ENST00000439008 CHRNDQ07001 517 aa16.73■□□□□ 0.27
LINC00399-201ENST00000439008 ATF7IPQ6VMQ6 1270 aa16.73■□□□□ 0.27
LINC00399-201ENST00000439008 TAF1DQ9H5J8 278 aaPredicted RBP16.73■□□□□ 0.27
LINC00399-201ENST00000439008 IRS2Q9Y4H2 1338 aa16.72■□□□□ 0.27
LINC00399-201ENST00000439008 ADAMTSL1Q8N6G6 1762 aa16.72■□□□□ 0.27
LINC00399-201ENST00000439008 SHTN1A0MZ66 631 aa16.72■□□□□ 0.27
LINC00399-201ENST00000439008 ECE2O60344 883 aa16.72■□□□□ 0.27
LINC00399-201ENST00000439008 TAF5LO75529 589 aa16.72■□□□□ 0.27
LINC00399-201ENST00000439008 RLBP1P12271 317 aa16.72■□□□□ 0.27
LINC00399-201ENST00000439008 ATP2B4P23634 1241 aa16.72■□□□□ 0.27
LINC00399-201ENST00000439008 EPS15P42566 896 aa16.72■□□□□ 0.27
LINC00399-201ENST00000439008 KLHDC4Q8TBB5 520 aa16.72■□□□□ 0.27
LINC00399-201ENST00000439008 RBM46Q8TBY0 533 aaKnown RBP16.72■□□□□ 0.27
LINC00399-201ENST00000439008 MPHOSPH8Q99549 860 aa16.72■□□□□ 0.27
LINC00399-201ENST00000439008 PSME4Q14997 1843 aa16.71■□□□□ 0.27
LINC00399-201ENST00000439008 RFX5P48382 616 aaPredicted RBP16.71■□□□□ 0.27
LINC00399-201ENST00000439008 CCDC57Q2TAC2 916 aa16.71■□□□□ 0.27
LINC00399-201ENST00000439008 PSMD14O00487 310 aa16.7■□□□□ 0.26
LINC00399-201ENST00000439008 GMPSP49915 693 aaPredicted RBP16.7■□□□□ 0.26
LINC00399-201ENST00000439008 LRRC24Q50LG9 513 aa16.7■□□□□ 0.26
LINC00399-201ENST00000439008 CIAPIN1Q6FI81 312 aa16.7■□□□□ 0.26
LINC00399-201ENST00000439008 LDHAL6AQ6ZMR3 332 aa16.7■□□□□ 0.26
LINC00399-201ENST00000439008 EYA3Q99504 573 aa16.7■□□□□ 0.26
LINC00399-201ENST00000439008 ZC3H12CQ9C0D7 883 aaKnown RBP16.7■□□□□ 0.26
LINC00399-201ENST00000439008 HACL1Q9UJ83 578 aa16.7■□□□□ 0.26
LINC00399-201ENST00000439008 LRRFIP2Q9Y608 721 aaKnown RBP16.7■□□□□ 0.26
LINC00399-201ENST00000439008 MED23Q9ULK4 1368 aa16.69■□□□□ 0.26
LINC00399-201ENST00000439008 C16orf71Q8IYS4 520 aaPredicted RBP16.69■□□□□ 0.26
LINC00399-201ENST00000439008 TMEM57Q8N5G2 664 aa16.69■□□□□ 0.26
LINC00399-201ENST00000439008 ZBTB12Q9Y330 459 aaPredicted RBP16.69■□□□□ 0.26
LINC00399-201ENST00000439008 RIPOR2Q9Y4F9 1068 aa16.69■□□□□ 0.26
LINC00399-201ENST00000439008 ZNF804BA4D1E1 1349 aa16.69■□□□□ 0.26
LINC00399-201ENST00000439008 IPO8O15397 1037 aaKnown RBP16.68■□□□□ 0.26
LINC00399-201ENST00000439008 UBTFL1P0CB47 393 aaPredicted RBP16.68■□□□□ 0.26
LINC00399-201ENST00000439008 EPHX2P34913 555 aa16.68■□□□□ 0.26
LINC00399-201ENST00000439008 ZKSCAN2Q63HK3 967 aa16.68■□□□□ 0.26
LINC00399-201ENST00000439008 GPRC5DQ9NZD1 345 aa16.68■□□□□ 0.26
LINC00399-201ENST00000439008 LEMD3Q9Y2U8 911 aa16.68■□□□□ 0.26
LINC00399-201ENST00000439008 IQCA1LA6NCM1 817 aa16.67■□□□□ 0.26
LINC00399-201ENST00000439008 PLIN1O60240 522 aa16.67■□□□□ 0.26
LINC00399-201ENST00000439008 PTPN12Q05209 780 aaKnown RBP16.67■□□□□ 0.26
LINC00399-201ENST00000439008 ANKRD2Q9GZV1 360 aa16.67■□□□□ 0.26
LINC00399-201ENST00000439008 CNNM1Q9NRU3 951 aa16.67■□□□□ 0.26
LINC00399-201ENST00000439008 FSTL1Q12841 308 aa16.66■□□□□ 0.26
LINC00399-201ENST00000439008 TAF7LQ5H9L4 462 aa16.66■□□□□ 0.26
LINC00399-201ENST00000439008 MXD3Q9BW11 206 aa16.66■□□□□ 0.26
LINC00399-201ENST00000439008 EGFRP00533 1210 aa16.65■□□□□ 0.26
LINC00399-201ENST00000439008 VIL1P09327 827 aaKnown RBP16.65■□□□□ 0.26
LINC00399-201ENST00000439008 HSPA6P17066 643 aa16.65■□□□□ 0.26
LINC00399-201ENST00000439008 HIRAP54198 1017 aaPredicted RBP16.65■□□□□ 0.26
LINC00399-201ENST00000439008 HTRA3P83110 453 aa16.65■□□□□ 0.26
LINC00399-201ENST00000439008 TNIP1Q15025 636 aa16.65■□□□□ 0.26
LINC00399-201ENST00000439008 EAPPQ56P03 285 aaPredicted RBP16.65■□□□□ 0.26
LINC00399-201ENST00000439008 VGLL2Q8N8G2 317 aa16.65■□□□□ 0.26
LINC00399-201ENST00000439008 SMC1BQ8NDV3 1235 aa16.65■□□□□ 0.26
LINC00399-201ENST00000439008 CHADLQ6NUI6 762 aa16.64■□□□□ 0.25
LINC00399-201ENST00000439008 C15orf52Q6ZUT6 534 aaKnown RBP16.64■□□□□ 0.25
LINC00399-201ENST00000439008 ATG9AQ7Z3C6 839 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms