RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 FAM227BQ96M60 508 aa13.58□□□□□ -0.24
TRAPPC9-202ENST00000438773 CCDC171Q6TFL3 1326 aa13.58□□□□□ -0.24
TRAPPC9-202ENST00000438773 STX6O43752 255 aa13.58□□□□□ -0.24
TRAPPC9-202ENST00000438773 CREB3L3Q68CJ9 461 aa13.58□□□□□ -0.24
TRAPPC9-202ENST00000438773 COL3A1P02461 1466 aaPredicted RBP13.57□□□□□ -0.24
TRAPPC9-202ENST00000438773 C6orf229H3BNL8 230 aa13.57□□□□□ -0.24
TRAPPC9-202ENST00000438773 CPA1P15085 419 aa13.57□□□□□ -0.24
TRAPPC9-202ENST00000438773 TNNT3P45378 269 aaPredicted RBP13.57□□□□□ -0.24
TRAPPC9-202ENST00000438773 GUCY1B3Q02153 619 aa13.57□□□□□ -0.24
TRAPPC9-202ENST00000438773 RBSNQ9H1K0 784 aa13.57□□□□□ -0.24
TRAPPC9-202ENST00000438773 PDE8AO60658 829 aa13.57□□□□□ -0.24
TRAPPC9-202ENST00000438773 ZSCAN23Q3MJ62 389 aa13.57□□□□□ -0.24
TRAPPC9-202ENST00000438773 TSPY26PQ9H489 355 aa13.57□□□□□ -0.24
TRAPPC9-202ENST00000438773 CFAP45Q9UL16 551 aa13.57□□□□□ -0.24
TRAPPC9-202ENST00000438773 KDM4FA0A1W2PPD8 638 aa13.57□□□□□ -0.24
TRAPPC9-202ENST00000438773 EDC3Q96F86 508 aaKnown RBP13.57□□□□□ -0.24
TRAPPC9-202ENST00000438773 PARP10Q53GL7 1025 aa13.56□□□□□ -0.24
TRAPPC9-202ENST00000438773 SAMD1Q6SPF0 538 aaPredicted RBP13.56□□□□□ -0.24
TRAPPC9-202ENST00000438773 CCDC82Q8N4S0 544 aa13.56□□□□□ -0.24
TRAPPC9-202ENST00000438773 CCNL1Q9UK58 526 aaPredicted RBP13.56□□□□□ -0.24
TRAPPC9-202ENST00000438773 GOLGA8BA8MQT2 603 aa13.56□□□□□ -0.24
TRAPPC9-202ENST00000438773 AK2P54819 239 aa13.56□□□□□ -0.24
TRAPPC9-202ENST00000438773 CRB1P82279 1406 aa13.56□□□□□ -0.24
TRAPPC9-202ENST00000438773 SYCE3A1L190 88 aa13.56□□□□□ -0.24
TRAPPC9-202ENST00000438773 IFIT3O14879 490 aaKnown RBP13.56□□□□□ -0.24
TRAPPC9-202ENST00000438773 RNF113AO15541 343 aaKnown RBP13.56□□□□□ -0.24
TRAPPC9-202ENST00000438773 LETM1O95202 739 aaPredicted RBP13.56□□□□□ -0.24
TRAPPC9-202ENST00000438773 USP5P45974 858 aa13.56□□□□□ -0.24
TRAPPC9-202ENST00000438773 PPP1R9BQ96SB3 815 aa13.56□□□□□ -0.24
TRAPPC9-202ENST00000438773 HOOK1Q9UJC3 728 aaKnown RBP13.56□□□□□ -0.24
TRAPPC9-202ENST00000438773 RANBP6O60518 1105 aaKnown RBP13.56□□□□□ -0.24
TRAPPC9-202ENST00000438773 HMGN5P82970 282 aaKnown RBP13.56□□□□□ -0.24
TRAPPC9-202ENST00000438773 SIGLEC1Q9BZZ2 1709 aa13.56□□□□□ -0.24
TRAPPC9-202ENST00000438773 ATP2B2Q01814 1243 aa13.55□□□□□ -0.24
TRAPPC9-202ENST00000438773 TPD52L1Q16890 204 aaPredicted RBP13.55□□□□□ -0.24
TRAPPC9-202ENST00000438773 RAB11FIP4Q86YS3 637 aa13.55□□□□□ -0.24
TRAPPC9-202ENST00000438773 RAD50Q92878 1312 aa13.55□□□□□ -0.24
TRAPPC9-202ENST00000438773 UQCRHLA0A096LP55 91 aa13.55□□□□□ -0.24
TRAPPC9-202ENST00000438773 UQCRHP07919 91 aa13.55□□□□□ -0.24
TRAPPC9-202ENST00000438773 NCOA7Q8NI08 942 aa13.55□□□□□ -0.24
TRAPPC9-202ENST00000438773 PIGBQ92521 554 aa13.55□□□□□ -0.24
TRAPPC9-202ENST00000438773 LMBRD1Q9NUN5 540 aa13.55□□□□□ -0.24
TRAPPC9-202ENST00000438773 ZBTB1Q9Y2K1 713 aa13.55□□□□□ -0.24
TRAPPC9-202ENST00000438773 NCAPD2Q15021 1401 aa13.55□□□□□ -0.24
TRAPPC9-202ENST00000438773 RBM5P52756 815 aaKnown RBP eCLIP13.55□□□□□ -0.24
TRAPPC9-202ENST00000438773 CCDC129Q6ZRS4 1044 aa13.55□□□□□ -0.24
TRAPPC9-202ENST00000438773 XAGE2Q96GT9 111 aa13.55□□□□□ -0.24
TRAPPC9-202ENST00000438773 NSFL1CQ9UNZ2 370 aaKnown RBP13.55□□□□□ -0.24
TRAPPC9-202ENST00000438773 MYO5BQ9ULV0 1848 aa13.55□□□□□ -0.24
TRAPPC9-202ENST00000438773 HEG1Q9ULI3 1381 aa13.55□□□□□ -0.24
TRAPPC9-202ENST00000438773 USP32Q8NFA0 1604 aa13.54□□□□□ -0.24
TRAPPC9-202ENST00000438773 NYXQ9GZU5 481 aa13.54□□□□□ -0.24
TRAPPC9-202ENST00000438773 TFIP11Q9UBB9 837 aaKnown RBP13.54□□□□□ -0.24
TRAPPC9-202ENST00000438773 JMYQ8N9B5 988 aa13.54□□□□□ -0.24
TRAPPC9-202ENST00000438773 TNMDQ9H2S6 317 aa13.54□□□□□ -0.24
TRAPPC9-202ENST00000438773 LOC102724428A0A0B4J2F2 783 aa13.54□□□□□ -0.24
TRAPPC9-202ENST00000438773 CYP7A1P22680 504 aa13.54□□□□□ -0.24
TRAPPC9-202ENST00000438773 SIK1P57059 783 aa13.54□□□□□ -0.24
TRAPPC9-202ENST00000438773 UNC5CLQ8IV45 518 aa13.54□□□□□ -0.24
TRAPPC9-202ENST00000438773 PIBF1Q8WXW3 757 aa13.54□□□□□ -0.24
TRAPPC9-202ENST00000438773 C8orf76Q96K31 380 aa13.54□□□□□ -0.24
TRAPPC9-202ENST00000438773 RNF41Q9H4P4 317 aaPredicted RBP13.54□□□□□ -0.24
TRAPPC9-202ENST00000438773 PES1O00541 588 aaKnown RBP13.53□□□□□ -0.24
TRAPPC9-202ENST00000438773 TPM2P07951 284 aa13.53□□□□□ -0.24
TRAPPC9-202ENST00000438773 POLD1P28340 1107 aa13.53□□□□□ -0.24
TRAPPC9-202ENST00000438773 GPT2Q8TD30 523 aa13.53□□□□□ -0.24
TRAPPC9-202ENST00000438773 OSBPL3Q9H4L5 887 aa13.53□□□□□ -0.24
TRAPPC9-202ENST00000438773 COPRSQ9NQ92 184 aa13.53□□□□□ -0.24
TRAPPC9-202ENST00000438773 TFCP2L1Q9NZI6 479 aa13.53□□□□□ -0.24
TRAPPC9-202ENST00000438773 STAP2Q9UGK3 403 aa13.53□□□□□ -0.24
TRAPPC9-202ENST00000438773 MCM5P33992 734 aa13.53□□□□□ -0.24
TRAPPC9-202ENST00000438773 IKQ13123 557 aaPredicted RBP13.53□□□□□ -0.24
TRAPPC9-202ENST00000438773 KBTBD3Q8NAB2 608 aa13.53□□□□□ -0.24
TRAPPC9-202ENST00000438773 Q6ZUG5 572 aa13.53□□□□□ -0.24
TRAPPC9-202ENST00000438773 MICU3Q86XE3 530 aa13.53□□□□□ -0.24
TRAPPC9-202ENST00000438773 IQCA1Q86XH1 822 aa13.53□□□□□ -0.24
TRAPPC9-202ENST00000438773 SCAND2PQ9GZW5 306 aaPredicted RBP13.53□□□□□ -0.24
TRAPPC9-202ENST00000438773 SLC12A7Q9Y666 1083 aa13.53□□□□□ -0.24
TRAPPC9-202ENST00000438773 POLR3DP05423 398 aaPredicted RBP13.53□□□□□ -0.24
TRAPPC9-202ENST00000438773 ATP5JP18859 108 aa13.53□□□□□ -0.24
TRAPPC9-202ENST00000438773 MKNK2Q9HBH9 465 aa13.53□□□□□ -0.24
TRAPPC9-202ENST00000438773 ZNF219Q9P2Y4 722 aaPredicted RBP13.53□□□□□ -0.24
TRAPPC9-202ENST00000438773 FER1L4A9Z1Z3 1794 aa13.52□□□□□ -0.24
TRAPPC9-202ENST00000438773 GIGYF2Q6Y7W6 1299 aaKnown RBP13.52□□□□□ -0.24
TRAPPC9-202ENST00000438773 CHST3Q7LGC8 479 aa13.52□□□□□ -0.24
TRAPPC9-202ENST00000438773 ZBTB38Q8NAP3 1195 aaPredicted RBP13.52□□□□□ -0.24
TRAPPC9-202ENST00000438773 MAP3K15Q6ZN16 1313 aa13.52□□□□□ -0.25
TRAPPC9-202ENST00000438773 CCDC192P0DO97 292 aa13.52□□□□□ -0.25
TRAPPC9-202ENST00000438773 TMEM67Q5HYA8 995 aa13.52□□□□□ -0.25
TRAPPC9-202ENST00000438773 MFSD6Q6ZSS7 791 aa13.52□□□□□ -0.25
TRAPPC9-202ENST00000438773 ZSCAN29Q8IWY8 852 aaPredicted RBP13.52□□□□□ -0.25
TRAPPC9-202ENST00000438773 SNX14Q9Y5W7 946 aa13.52□□□□□ -0.25
TRAPPC9-202ENST00000438773 ARHGAP23Q9P227 1491 aa13.52□□□□□ -0.25
TRAPPC9-202ENST00000438773 OFD1O75665 1012 aa13.52□□□□□ -0.25
TRAPPC9-202ENST00000438773 ST5P78524 1137 aa13.52□□□□□ -0.25
TRAPPC9-202ENST00000438773 LRRC24Q50LG9 513 aa13.52□□□□□ -0.25
TRAPPC9-202ENST00000438773 TRAPPC3LQ5T215 181 aa13.52□□□□□ -0.25
TRAPPC9-202ENST00000438773 CCDC144CPQ8IYA2 1237 aa13.52□□□□□ -0.25
TRAPPC9-202ENST00000438773 CCDC24Q8N4L8 307 aa13.52□□□□□ -0.25
TRAPPC9-202ENST00000438773 STK32BQ9NY57 414 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms