RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 ZBTB7BO15156 539 aaPredicted RBP20.22■□□□□ 0.83
SNRPB-202ENST00000438552 GNAI2P04899 355 aa20.22■□□□□ 0.83
SNRPB-202ENST00000438552 LMNB1P20700 586 aa20.22■□□□□ 0.83
SNRPB-202ENST00000438552 PDE3AQ14432 1141 aa20.22■□□□□ 0.83
SNRPB-202ENST00000438552 MPNDQ8N594 471 aa20.22■□□□□ 0.83
SNRPB-202ENST00000438552 MPHOSPH8Q99549 860 aa20.22■□□□□ 0.83
SNRPB-202ENST00000438552 GRIPAP1Q4V328 841 aa20.21■□□□□ 0.83
SNRPB-202ENST00000438552 KLHDC4Q8TBB5 520 aa20.21■□□□□ 0.83
SNRPB-202ENST00000438552 NSFL1CQ9UNZ2 370 aaKnown RBP20.21■□□□□ 0.83
SNRPB-202ENST00000438552 DDX19BQ9UMR2 479 aa20.2■□□□□ 0.82
SNRPB-202ENST00000438552 MINPP1Q9UNW1 487 aa20.2■□□□□ 0.82
SNRPB-202ENST00000438552 IARSP41252 1262 aaKnown RBP20.19■□□□□ 0.82
SNRPB-202ENST00000438552 RFX5P48382 616 aaPredicted RBP20.19■□□□□ 0.82
SNRPB-202ENST00000438552 GPR101Q96P66 508 aaPredicted RBP20.19■□□□□ 0.82
SNRPB-202ENST00000438552 RTFDC1Q9BY42 306 aaPredicted RBP20.19■□□□□ 0.82
SNRPB-202ENST00000438552 ANKIB1Q9P2G1 1089 aa20.19■□□□□ 0.82
SNRPB-202ENST00000438552 XDHP47989 1333 aa20.19■□□□□ 0.82
SNRPB-202ENST00000438552 UFL1O94874 794 aa20.18■□□□□ 0.82
SNRPB-202ENST00000438552 LDHAL6AQ6ZMR3 332 aa20.18■□□□□ 0.82
SNRPB-202ENST00000438552 PUS3Q9BZE2 481 aaKnown RBP20.18■□□□□ 0.82
SNRPB-202ENST00000438552 CNNM1Q9NRU3 951 aa20.18■□□□□ 0.82
SNRPB-202ENST00000438552 PODXL2Q9NZ53 605 aa20.18■□□□□ 0.82
SNRPB-202ENST00000438552 CHRNDQ07001 517 aa20.17■□□□□ 0.82
SNRPB-202ENST00000438552 MTX1Q13505 466 aa20.17■□□□□ 0.82
SNRPB-202ENST00000438552 AOC3Q16853 763 aa20.17■□□□□ 0.82
SNRPB-202ENST00000438552 SUPT20HQ8NEM7 779 aa20.17■□□□□ 0.82
SNRPB-202ENST00000438552 TBC1D16Q8TBP0 767 aa20.17■□□□□ 0.82
SNRPB-202ENST00000438552 POLLQ9UGP5 575 aa20.17■□□□□ 0.82
SNRPB-202ENST00000438552 PNMA6EA0A0J9YXQ4 647 aa20.16■□□□□ 0.82
SNRPB-202ENST00000438552 WTIPA6NIX2 430 aaPredicted RBP20.16■□□□□ 0.82
SNRPB-202ENST00000438552 C6orf229H3BNL8 230 aa20.16■□□□□ 0.82
SNRPB-202ENST00000438552 SRGAP3O43295 1099 aa20.16■□□□□ 0.82
SNRPB-202ENST00000438552 PPIP5K2O43314 1243 aa20.16■□□□□ 0.82
SNRPB-202ENST00000438552 PTPN12Q05209 780 aaKnown RBP20.16■□□□□ 0.82
SNRPB-202ENST00000438552 LRRC24Q50LG9 513 aa20.16■□□□□ 0.82
SNRPB-202ENST00000438552 HELBQ8NG08 1087 aaPredicted RBP20.16■□□□□ 0.82
SNRPB-202ENST00000438552 GGA1Q9UJY5 639 aa20.16■□□□□ 0.82
SNRPB-202ENST00000438552 SIL1Q9H173 461 aa20.15■□□□□ 0.82
SNRPB-202ENST00000438552 PA2G4Q9UQ80 394 aaKnown RBP20.15■□□□□ 0.82
SNRPB-202ENST00000438552 LARGE2Q8N3Y3 721 aa20.14■□□□□ 0.81
SNRPB-202ENST00000438552 ANKRD2Q9GZV1 360 aa20.14■□□□□ 0.81
SNRPB-202ENST00000438552 ZBTB40Q9NUA8 1239 aa20.14■□□□□ 0.81
SNRPB-202ENST00000438552 SUPT16HQ9Y5B9 1047 aaKnown RBP20.14■□□□□ 0.81
SNRPB-202ENST00000438552 TAF5LO75529 589 aa20.13■□□□□ 0.81
SNRPB-202ENST00000438552 ATP2B4P23634 1241 aa20.13■□□□□ 0.81
SNRPB-202ENST00000438552 KIAA2012Q0VF49 1180 aa20.13■□□□□ 0.81
SNRPB-202ENST00000438552 CEP85Q6P2H3 762 aa20.13■□□□□ 0.81
SNRPB-202ENST00000438552 RIPOR2Q9Y4F9 1068 aa20.13■□□□□ 0.81
SNRPB-202ENST00000438552 ZC3H4Q9UPT8 1303 aaKnown RBP20.12■□□□□ 0.81
SNRPB-202ENST00000438552 SNAP23O00161 211 aa20.12■□□□□ 0.81
SNRPB-202ENST00000438552 RIMBP2O15034 1052 aa20.12■□□□□ 0.81
SNRPB-202ENST00000438552 WASHC4Q2M389 1173 aa20.12■□□□□ 0.81
SNRPB-202ENST00000438552 CRBNQ96SW2 442 aa20.12■□□□□ 0.81
SNRPB-202ENST00000438552 EYA3Q99504 573 aa20.12■□□□□ 0.81
SNRPB-202ENST00000438552 PSME4Q14997 1843 aa20.11■□□□□ 0.81
SNRPB-202ENST00000438552 MED23Q9ULK4 1368 aa20.11■□□□□ 0.81
SNRPB-202ENST00000438552 ARAP2Q8WZ64 1704 aa20.11■□□□□ 0.81
SNRPB-202ENST00000438552 ZNF804BA4D1E1 1349 aa20.11■□□□□ 0.81
SNRPB-202ENST00000438552 MROH5Q6ZUA9 1318 aa20.11■□□□□ 0.81
SNRPB-202ENST00000438552 EYA2O00167 538 aa20.11■□□□□ 0.81
SNRPB-202ENST00000438552 KCNJ4P48050 445 aa20.11■□□□□ 0.81
SNRPB-202ENST00000438552 METTL24Q5JXM2 366 aa20.11■□□□□ 0.81
SNRPB-202ENST00000438552 NIM1KQ8IY84 436 aa20.11■□□□□ 0.81
SNRPB-202ENST00000438552 VPS33BQ9H267 617 aa20.11■□□□□ 0.81
SNRPB-202ENST00000438552 SCN9AQ15858 1988 aa20.11■□□□□ 0.81
SNRPB-202ENST00000438552 ZNF541Q9H0D2 1346 aa20.1■□□□□ 0.81
SNRPB-202ENST00000438552 KLRK1P26718 216 aa20.1■□□□□ 0.81
SNRPB-202ENST00000438552 ATP8B2P98198 1209 aa20.1■□□□□ 0.81
SNRPB-202ENST00000438552 POLA2Q14181 598 aa20.1■□□□□ 0.81
SNRPB-202ENST00000438552 ATG9AQ7Z3C6 839 aa20.1■□□□□ 0.81
SNRPB-202ENST00000438552 JDP2Q8WYK2 163 aa20.1■□□□□ 0.81
SNRPB-202ENST00000438552 CHMP4BQ9H444 224 aaKnown RBP20.1■□□□□ 0.81
SNRPB-202ENST00000438552 COPRSQ9NQ92 184 aa20.1■□□□□ 0.81
SNRPB-202ENST00000438552 LEMD3Q9Y2U8 911 aa20.1■□□□□ 0.81
SNRPB-202ENST00000438552 ZNF646O15015 1829 aaPredicted RBP20.1■□□□□ 0.81
SNRPB-202ENST00000438552 CIAO1O76071 339 aa20.09■□□□□ 0.81
SNRPB-202ENST00000438552 VGLL2Q8N8G2 317 aa20.09■□□□□ 0.81
SNRPB-202ENST00000438552 SSH3Q8TE77 659 aa20.09■□□□□ 0.81
SNRPB-202ENST00000438552 ZNF526Q8TF50 670 aaPredicted RBP20.09■□□□□ 0.81
SNRPB-202ENST00000438552 DBNDD1Q9H9R9 158 aa20.09■□□□□ 0.81
SNRPB-202ENST00000438552 DOK7Q18PE1 504 aa20.08■□□□□ 0.81
SNRPB-202ENST00000438552 TXNRD3Q86VQ6 643 aa20.08■□□□□ 0.81
SNRPB-202ENST00000438552 ZC3H12CQ9C0D7 883 aaKnown RBP20.08■□□□□ 0.81
SNRPB-202ENST00000438552 IRS2Q9Y4H2 1338 aa20.07■□□□□ 0.8
SNRPB-202ENST00000438552 FZD9O00144 591 aa20.07■□□□□ 0.8
SNRPB-202ENST00000438552 ECE2O60344 883 aa20.07■□□□□ 0.8
SNRPB-202ENST00000438552 FBXO3Q9UK99 471 aa20.07■□□□□ 0.8
SNRPB-202ENST00000438552 YDJCA8MPS7 323 aa20.06■□□□□ 0.8
SNRPB-202ENST00000438552 IL15P40933 162 aaPredicted RBP20.06■□□□□ 0.8
SNRPB-202ENST00000438552 WDR90Q96KV7 1748 aa20.06■□□□□ 0.8
SNRPB-202ENST00000438552 ZNRF3Q9ULT6 936 aa20.06■□□□□ 0.8
SNRPB-202ENST00000438552 MYH13Q9UKX3 1938 aa20.06■□□□□ 0.8
SNRPB-202ENST00000438552 PDE8BO95263 885 aa20.05■□□□□ 0.8
SNRPB-202ENST00000438552 SIRT2Q8IXJ6 389 aa20.05■□□□□ 0.8
SNRPB-202ENST00000438552 G3V3G9 751 aa20.04■□□□□ 0.8
SNRPB-202ENST00000438552 EIF6P56537 245 aaKnown RBP20.04■□□□□ 0.8
SNRPB-202ENST00000438552 UBE4AQ14139 1066 aa20.04■□□□□ 0.8
SNRPB-202ENST00000438552 DCAF8Q5TAQ9 597 aa20.04■□□□□ 0.8
SNRPB-202ENST00000438552 ZNF784Q8NCA9 323 aaPredicted RBP20.04■□□□□ 0.8
SNRPB-202ENST00000438552 GLTPD2A6NH11 291 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms