RNA–Protein interactions for RNA: ENST00000437736.5

PSMD4-204, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 5

Gene PSMD4, Length 787 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-204	ENST00000437736	CNNM1	Q9NRU3	951 aa		12.56	□□□□□ -0.4
PSMD4-204	ENST00000437736	LTBP3	Q9NS15	1303 aa		12.56	□□□□□ -0.4
PSMD4-204	ENST00000437736	PNMA6E	A0A0J9YXQ4	647 aa		12.55	□□□□□ -0.4
PSMD4-204	ENST00000437736	GPSM2	P81274	684 aa		12.55	□□□□□ -0.4
PSMD4-204	ENST00000437736	MTX1	Q13505	466 aa		12.55	□□□□□ -0.4
PSMD4-204	ENST00000437736	CC2D2B	Q6DHV5	1058 aa		12.55	□□□□□ -0.4
PSMD4-204	ENST00000437736	CEP85	Q6P2H3	762 aa		12.55	□□□□□ -0.4
PSMD4-204	ENST00000437736	DPP8	Q6V1X1	898 aa	Predicted RBP	12.55	□□□□□ -0.4
PSMD4-204	ENST00000437736	LDHAL6A	Q6ZMR3	332 aa		12.55	□□□□□ -0.4
PSMD4-204	ENST00000437736	SIL1	Q9H173	461 aa		12.55	□□□□□ -0.4
PSMD4-204	ENST00000437736	BSDC1	Q9NW68	430 aa	Predicted RBP	12.55	□□□□□ -0.4
PSMD4-204	ENST00000437736	ANKIB1	Q9P2G1	1089 aa		12.55	□□□□□ -0.4
PSMD4-204	ENST00000437736	NSFL1C	Q9UNZ2	370 aa	Known RBP	12.55	□□□□□ -0.4
PSMD4-204	ENST00000437736	PA2G4	Q9UQ80	394 aa	Known RBP	12.55	□□□□□ -0.4
PSMD4-204	ENST00000437736	SNED1	Q8TER0	1413 aa		12.54	□□□□□ -0.4
PSMD4-204	ENST00000437736	IARS	P41252	1262 aa	Known RBP	12.54	□□□□□ -0.4
PSMD4-204	ENST00000437736	RFX5	P48382	616 aa	Predicted RBP	12.54	□□□□□ -0.4
PSMD4-204	ENST00000437736	MPND	Q8N594	471 aa		12.54	□□□□□ -0.4
PSMD4-204	ENST00000437736	PUS3	Q9BZE2	481 aa	Known RBP	12.54	□□□□□ -0.4
PSMD4-204	ENST00000437736	DUOX1	Q9NRD9	1551 aa		12.54	□□□□□ -0.4
PSMD4-204	ENST00000437736	FER1L6	Q2WGJ9	1857 aa		12.53	□□□□□ -0.4
PSMD4-204	ENST00000437736	UFL1	O94874	794 aa		12.53	□□□□□ -0.4
PSMD4-204	ENST00000437736	ATP8B2	P98198	1209 aa		12.53	□□□□□ -0.4
PSMD4-204	ENST00000437736	PTPN12	Q05209	780 aa	Known RBP	12.53	□□□□□ -0.4
PSMD4-204	ENST00000437736	CHRND	Q07001	517 aa		12.53	□□□□□ -0.4
PSMD4-204	ENST00000437736	LRRC24	Q50LG9	513 aa		12.53	□□□□□ -0.4
PSMD4-204	ENST00000437736	EXOC6	Q8TAG9	804 aa		12.53	□□□□□ -0.4
PSMD4-204	ENST00000437736	PSMD1	Q99460	953 aa		12.53	□□□□□ -0.4
PSMD4-204	ENST00000437736	MINPP1	Q9UNW1	487 aa		12.53	□□□□□ -0.4
PSMD4-204	ENST00000437736	XDH	P47989	1333 aa		12.53	□□□□□ -0.4
PSMD4-204	ENST00000437736	LTBP1	Q14766	1721 aa		12.53	□□□□□ -0.4
PSMD4-204	ENST00000437736		A0A1B0GUL6	1792 aa		12.52	□□□□□ -0.41
PSMD4-204	ENST00000437736	C6orf229	H3BNL8	230 aa		12.52	□□□□□ -0.41
PSMD4-204	ENST00000437736	GRIPAP1	Q4V328	841 aa		12.52	□□□□□ -0.41
PSMD4-204	ENST00000437736	HELB	Q8NG08	1087 aa	Predicted RBP	12.52	□□□□□ -0.41
PSMD4-204	ENST00000437736	GPR101	Q96P66	508 aa	Predicted RBP	12.52	□□□□□ -0.41
PSMD4-204	ENST00000437736	NMRK2	Q9NPI5	230 aa		12.52	□□□□□ -0.41
PSMD4-204	ENST00000437736	KDM2B	Q8NHM5	1336 aa		12.52	□□□□□ -0.41
PSMD4-204	ENST00000437736	SBF1	O95248	1867 aa		12.52	□□□□□ -0.41
PSMD4-204	ENST00000437736	EYA2	O00167	538 aa		12.51	□□□□□ -0.41
PSMD4-204	ENST00000437736	PPIP5K2	O43314	1243 aa		12.51	□□□□□ -0.41
PSMD4-204	ENST00000437736	TAF5L	O75529	589 aa		12.51	□□□□□ -0.41
PSMD4-204	ENST00000437736	KCNJ4	P48050	445 aa		12.51	□□□□□ -0.41
PSMD4-204	ENST00000437736	POLA2	Q14181	598 aa		12.51	□□□□□ -0.41
PSMD4-204	ENST00000437736	AOC3	Q16853	763 aa		12.51	□□□□□ -0.41
PSMD4-204	ENST00000437736	METTL24	Q5JXM2	366 aa		12.51	□□□□□ -0.41
PSMD4-204	ENST00000437736	LARGE2	Q8N3Y3	721 aa		12.51	□□□□□ -0.41
PSMD4-204	ENST00000437736	SSH3	Q8TE77	659 aa		12.51	□□□□□ -0.41
PSMD4-204	ENST00000437736	ANKRD2	Q9GZV1	360 aa		12.51	□□□□□ -0.41
PSMD4-204	ENST00000437736	RRAGC	Q9HB90	399 aa		12.51	□□□□□ -0.41
PSMD4-204	ENST00000437736	COPRS	Q9NQ92	184 aa		12.51	□□□□□ -0.41
PSMD4-204	ENST00000437736	GGA1	Q9UJY5	639 aa		12.51	□□□□□ -0.41
PSMD4-204	ENST00000437736	MROH5	Q6ZUA9	1318 aa		12.51	□□□□□ -0.41
PSMD4-204	ENST00000437736	TIAM2	Q8IVF5	1701 aa		12.51	□□□□□ -0.41
PSMD4-204	ENST00000437736	GLTPD2	A6NH11	291 aa		12.5	□□□□□ -0.41
PSMD4-204	ENST00000437736	WTIP	A6NIX2	430 aa	Predicted RBP	12.5	□□□□□ -0.41
PSMD4-204	ENST00000437736	HMMR	O75330	724 aa		12.5	□□□□□ -0.41
PSMD4-204	ENST00000437736	CIAO1	O76071	339 aa		12.5	□□□□□ -0.41
PSMD4-204	ENST00000437736	OS9	Q13438	667 aa	Predicted RBP	12.5	□□□□□ -0.41
PSMD4-204	ENST00000437736	DPY19L2	Q6NUT2	758 aa		12.5	□□□□□ -0.41
PSMD4-204	ENST00000437736	SIRT2	Q8IXJ6	389 aa		12.5	□□□□□ -0.41
PSMD4-204	ENST00000437736	RPAP2	Q8IXW5	612 aa	Predicted RBP	12.5	□□□□□ -0.41
PSMD4-204	ENST00000437736	SUPT20H	Q8NEM7	779 aa		12.5	□□□□□ -0.41
PSMD4-204	ENST00000437736	TBC1D16	Q8TBP0	767 aa		12.5	□□□□□ -0.41
PSMD4-204	ENST00000437736	JDP2	Q8WYK2	163 aa		12.5	□□□□□ -0.41
PSMD4-204	ENST00000437736	PODXL2	Q9NZ53	605 aa		12.5	□□□□□ -0.41
PSMD4-204	ENST00000437736	POLL	Q9UGP5	575 aa		12.5	□□□□□ -0.41
PSMD4-204	ENST00000437736	RIPOR2	Q9Y4F9	1068 aa		12.5	□□□□□ -0.41
PSMD4-204	ENST00000437736	ZNF541	Q9H0D2	1346 aa		12.5	□□□□□ -0.41
PSMD4-204	ENST00000437736	ZC3H4	Q9UPT8	1303 aa	Known RBP	12.5	□□□□□ -0.41
PSMD4-204	ENST00000437736	ZNF804B	A4D1E1	1349 aa		12.49	□□□□□ -0.41
PSMD4-204	ENST00000437736	SNAP23	O00161	211 aa		12.49	□□□□□ -0.41
PSMD4-204	ENST00000437736	RIMBP2	O15034	1052 aa		12.49	□□□□□ -0.41
PSMD4-204	ENST00000437736	SURF6	O75683	361 aa	Known RBP	12.49	□□□□□ -0.41
PSMD4-204	ENST00000437736	DDN	O94850	711 aa	Predicted RBP	12.49	□□□□□ -0.41
PSMD4-204	ENST00000437736	ATP2B4	P23634	1241 aa		12.49	□□□□□ -0.41
PSMD4-204	ENST00000437736	ATG9A	Q7Z3C6	839 aa		12.49	□□□□□ -0.41
PSMD4-204	ENST00000437736	NIM1K	Q8IY84	436 aa		12.49	□□□□□ -0.41
PSMD4-204	ENST00000437736	RTFDC1	Q9BY42	306 aa	Predicted RBP	12.49	□□□□□ -0.41
PSMD4-204	ENST00000437736	PCDHB15	Q9Y5E8	787 aa		12.49	□□□□□ -0.41
PSMD4-204	ENST00000437736	CCDC88A	Q3V6T2	1871 aa		12.48	□□□□□ -0.41
PSMD4-204	ENST00000437736	KIF3C	O14782	793 aa		12.48	□□□□□ -0.41
PSMD4-204	ENST00000437736	NEFL	P07196	543 aa		12.48	□□□□□ -0.41
PSMD4-204	ENST00000437736	KLRK1	P26718	216 aa		12.48	□□□□□ -0.41
PSMD4-204	ENST00000437736	IL15	P40933	162 aa	Predicted RBP	12.48	□□□□□ -0.41
PSMD4-204	ENST00000437736	G3BP1	Q13283	466 aa	Known RBP eCLIP	12.48	□□□□□ -0.41	1e-6	■■□□□ 12.5
PSMD4-204	ENST00000437736	WASHC4	Q2M389	1173 aa		12.48	□□□□□ -0.41
PSMD4-204	ENST00000437736	EYA3	Q99504	573 aa		12.48	□□□□□ -0.41
PSMD4-204	ENST00000437736	FBXO3	Q9UK99	471 aa		12.48	□□□□□ -0.41
PSMD4-204	ENST00000437736	EXOC6B	Q9Y2D4	811 aa		12.48	□□□□□ -0.41
PSMD4-204	ENST00000437736	GJA3	Q9Y6H8	435 aa		12.48	□□□□□ -0.41
PSMD4-204	ENST00000437736	COL4A5	P29400	1685 aa		12.48	□□□□□ -0.41
PSMD4-204	ENST00000437736	FZD9	O00144	591 aa		12.47	□□□□□ -0.41
PSMD4-204	ENST00000437736	APBB1	O00213	710 aa		12.47	□□□□□ -0.41
PSMD4-204	ENST00000437736	PDE8B	O95263	885 aa		12.47	□□□□□ -0.41
PSMD4-204	ENST00000437736	EIF6	P56537	245 aa	Known RBP	12.47	□□□□□ -0.41
PSMD4-204	ENST00000437736	KIAA2012	Q0VF49	1180 aa		12.47	□□□□□ -0.41
PSMD4-204	ENST00000437736	TFCP2	Q12800	502 aa		12.47	□□□□□ -0.41
PSMD4-204	ENST00000437736	C16orf71	Q8IYS4	520 aa	Predicted RBP	12.47	□□□□□ -0.41
PSMD4-204	ENST00000437736	VGLL2	Q8N8G2	317 aa		12.47	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms