RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 GTPBP4Q9BZE4 634 aaKnown RBP18.16■□□□□ 0.5
PTPN13-204ENST00000436978 PIK3C2GO75747 1445 aa18.16■□□□□ 0.5
PTPN13-204ENST00000436978 C19orf44Q9H6X5 657 aa18.16■□□□□ 0.5
PTPN13-204ENST00000436978 NF2P35240 595 aa18.16■□□□□ 0.5
PTPN13-204ENST00000436978 LRRC45Q96CN5 670 aa18.16■□□□□ 0.5
PTPN13-204ENST00000436978 SHTN1A0MZ66 631 aa18.16■□□□□ 0.5
PTPN13-204ENST00000436978 TCERG1LQ5VWI1 586 aa18.16■□□□□ 0.5
PTPN13-204ENST00000436978 TNPO1Q92973 898 aaKnown RBP18.16■□□□□ 0.5
PTPN13-204ENST00000436978 SNRKQ9NRH2 765 aa18.15■□□□□ 0.5
PTPN13-204ENST00000436978 PAG1Q9NWQ8 432 aa18.15■□□□□ 0.5
PTPN13-204ENST00000436978 PARP3Q9Y6F1 533 aa18.15■□□□□ 0.5
PTPN13-204ENST00000436978 PLVAPQ9BX97 442 aa18.15■□□□□ 0.5
PTPN13-204ENST00000436978 TPTE2Q6XPS3 522 aa18.15■□□□□ 0.5
PTPN13-204ENST00000436978 SIRT1Q96EB6 747 aa18.15■□□□□ 0.5
PTPN13-204ENST00000436978 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.15■□□□□ 0.5
PTPN13-204ENST00000436978 LIG1P18858 919 aa18.15■□□□□ 0.5
PTPN13-204ENST00000436978 COPS6Q7L5N1 327 aa18.15■□□□□ 0.5
PTPN13-204ENST00000436978 DZIP3Q86Y13 1208 aaKnown RBP18.15■□□□□ 0.5
PTPN13-204ENST00000436978 POLD1P28340 1107 aa18.14■□□□□ 0.5
PTPN13-204ENST00000436978 TAF3Q5VWG9 929 aa18.14■□□□□ 0.49
PTPN13-204ENST00000436978 CALML3P27482 149 aa18.14■□□□□ 0.49
PTPN13-204ENST00000436978 ACSBG1Q96GR2 724 aa18.14■□□□□ 0.49
PTPN13-204ENST00000436978 DCAF5Q96JK2 942 aa18.14■□□□□ 0.49
PTPN13-204ENST00000436978 CDCA7Q9BWT1 371 aaPredicted RBP18.14■□□□□ 0.49
PTPN13-204ENST00000436978 SYKP43405 635 aa18.14■□□□□ 0.49
PTPN13-204ENST00000436978 TBC1D2Q9BYX2 928 aa18.14■□□□□ 0.49
PTPN13-204ENST00000436978 ATP10AO60312 1499 aa18.14■□□□□ 0.49
PTPN13-204ENST00000436978 PARD3Q8TEW0 1356 aa18.14■□□□□ 0.49
PTPN13-204ENST00000436978 EIF4A2Q14240 407 aaKnown RBP18.14■□□□□ 0.49
PTPN13-204ENST00000436978 CKAP2LQ8IYA6 745 aa18.14■□□□□ 0.49
PTPN13-204ENST00000436978 MPNDQ8N594 471 aa18.14■□□□□ 0.49
PTPN13-204ENST00000436978 KLF18A0A0U1RQI7 1052 aa18.13■□□□□ 0.49
PTPN13-204ENST00000436978 UVSSAQ2YD98 709 aa18.13■□□□□ 0.49
PTPN13-204ENST00000436978 HEATR3Q7Z4Q2 680 aa18.13■□□□□ 0.49
PTPN13-204ENST00000436978 EYA3Q99504 573 aa18.13■□□□□ 0.49
PTPN13-204ENST00000436978 TRAPPC8Q9Y2L5 1435 aa18.13■□□□□ 0.49
PTPN13-204ENST00000436978 IDEP14735 1019 aa18.13■□□□□ 0.49
PTPN13-204ENST00000436978 MRPL50Q8N5N7 158 aaKnown RBP18.13■□□□□ 0.49
PTPN13-204ENST00000436978 ZSCAN22P10073 491 aaPredicted RBP18.13■□□□□ 0.49
PTPN13-204ENST00000436978 SSFA2P28290 1259 aa18.13■□□□□ 0.49
PTPN13-204ENST00000436978 ATP8B2P98198 1209 aa18.13■□□□□ 0.49
PTPN13-204ENST00000436978 RRP36Q96EU6 259 aaKnown RBP18.13■□□□□ 0.49
PTPN13-204ENST00000436978 PRC1O43663 620 aa18.12■□□□□ 0.49
PTPN13-204ENST00000436978 RBM10P98175 930 aaKnown RBP18.12■□□□□ 0.49
PTPN13-204ENST00000436978 ANKRD44Q8N8A2 993 aa18.12■□□□□ 0.49
PTPN13-204ENST00000436978 ALG1Q9BT22 464 aa18.12■□□□□ 0.49
PTPN13-204ENST00000436978 CGNQ9P2M7 1197 aaKnown RBP18.12■□□□□ 0.49
PTPN13-204ENST00000436978 TMC6Q7Z403 805 aa18.12■□□□□ 0.49
PTPN13-204ENST00000436978 LRRC59Q96AG4 307 aaKnown RBP18.12■□□□□ 0.49
PTPN13-204ENST00000436978 TRIM47Q96LD4 638 aa18.12■□□□□ 0.49
PTPN13-204ENST00000436978 CCDC113Q9H0I3 377 aa18.12■□□□□ 0.49
PTPN13-204ENST00000436978 TBC1D32Q96NH3 1257 aa18.12■□□□□ 0.49
PTPN13-204ENST00000436978 EDC4Q6P2E9 1401 aaKnown RBP18.12■□□□□ 0.49
PTPN13-204ENST00000436978 SLC4A8Q2Y0W8 1093 aa18.12■□□□□ 0.49
PTPN13-204ENST00000436978 RBM17Q96I25 401 aaKnown RBP18.12■□□□□ 0.49
PTPN13-204ENST00000436978 SPDYE3A6NKU9 549 aa18.11■□□□□ 0.49
PTPN13-204ENST00000436978 NCBP1Q09161 790 aaKnown RBP18.11■□□□□ 0.49
PTPN13-204ENST00000436978 RBM28Q9NW13 759 aaKnown RBP18.11■□□□□ 0.49
PTPN13-204ENST00000436978 SDSP20132 328 aa18.11■□□□□ 0.49
PTPN13-204ENST00000436978 MACROD2A1Z1Q3 448 aa18.11■□□□□ 0.49
PTPN13-204ENST00000436978 ZMYM3Q14202 1370 aa18.11■□□□□ 0.49
PTPN13-204ENST00000436978 NAPAP54920 295 aa18.11■□□□□ 0.49
PTPN13-204ENST00000436978 BBXQ8WY36 941 aaPredicted RBP18.11■□□□□ 0.49
PTPN13-204ENST00000436978 C6orf50Q9HD87 102 aa18.11■□□□□ 0.49
PTPN13-204ENST00000436978 KRT13P13646 458 aa18.1■□□□□ 0.49
PTPN13-204ENST00000436978 PRPHP41219 470 aa18.1■□□□□ 0.49
PTPN13-204ENST00000436978 LMTK3Q96Q04 1460 aa18.1■□□□□ 0.49
PTPN13-204ENST00000436978 PDE1AP54750 535 aa18.1■□□□□ 0.49
PTPN13-204ENST00000436978 ESYT1Q9BSJ8 1104 aa18.1■□□□□ 0.49
PTPN13-204ENST00000436978 NBPF14Q5TI25 921 aa18.1■□□□□ 0.49
PTPN13-204ENST00000436978 SMARCC2Q8TAQ2 1214 aa18.1■□□□□ 0.49
PTPN13-204ENST00000436978 SYNCQ9H7C4 482 aa18.1■□□□□ 0.49
PTPN13-204ENST00000436978 PUF60Q9UHX1 559 aaKnown RBP18.1■□□□□ 0.49
PTPN13-204ENST00000436978 SMC1AQ14683 1233 aaKnown RBP18.1■□□□□ 0.49
PTPN13-204ENST00000436978 CERS3Q8IU89 383 aa18.1■□□□□ 0.49
PTPN13-204ENST00000436978 COL17A1Q9UMD9 1497 aaPredicted RBP18.1■□□□□ 0.49
PTPN13-204ENST00000436978 URI1O94763 535 aaPredicted RBP18.1■□□□□ 0.49
PTPN13-204ENST00000436978 KIF4AO95239 1232 aa18.09■□□□□ 0.49
PTPN13-204ENST00000436978 KRT2P35908 639 aa18.09■□□□□ 0.49
PTPN13-204ENST00000436978 TNNI2P48788 182 aa18.09■□□□□ 0.49
PTPN13-204ENST00000436978 SLC9C2Q5TAH2 1124 aa18.09■□□□□ 0.49
PTPN13-204ENST00000436978 MEIS3Q99687 375 aa18.09■□□□□ 0.49
PTPN13-204ENST00000436978 C16orf71Q8IYS4 520 aaPredicted RBP18.09■□□□□ 0.49
PTPN13-204ENST00000436978 NOP2P46087 812 aaKnown RBP18.09■□□□□ 0.49
PTPN13-204ENST00000436978 LINS1Q8NG48 757 aa18.09■□□□□ 0.49
PTPN13-204ENST00000436978 TSNARE1Q96NA8 513 aa18.09■□□□□ 0.49
PTPN13-204ENST00000436978 TMCO5BA8MYB1 307 aa18.08■□□□□ 0.49
PTPN13-204ENST00000436978 ACTN2P35609 894 aa18.08■□□□□ 0.49
PTPN13-204ENST00000436978 Q6ZUG5 572 aa18.08■□□□□ 0.49
PTPN13-204ENST00000436978 MICALCLQ6ZW33 695 aa18.08■□□□□ 0.49
PTPN13-204ENST00000436978 RBM8AQ9Y5S9 174 aaKnown RBP18.08■□□□□ 0.49
PTPN13-204ENST00000436978 PABPN1LA6NDY0 278 aaKnown RBP18.08■□□□□ 0.49
PTPN13-204ENST00000436978 PICALMQ13492 652 aa18.08■□□□□ 0.49
PTPN13-204ENST00000436978 ZFYVE16Q7Z3T8 1539 aa18.08■□□□□ 0.49
PTPN13-204ENST00000436978 ZC3H12CQ9C0D7 883 aaKnown RBP18.08■□□□□ 0.48
PTPN13-204ENST00000436978 A0A1W2PP64 1363 aa18.08■□□□□ 0.48
PTPN13-204ENST00000436978 NFATC2IPQ8NCF5 419 aa18.08■□□□□ 0.48
PTPN13-204ENST00000436978 JDP2Q8WYK2 163 aa18.08■□□□□ 0.48
PTPN13-204ENST00000436978 BABAM1Q9NWV8 329 aa18.08■□□□□ 0.48
PTPN13-204ENST00000436978 SAMD9Q5K651 1589 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms