RNA–Protein interactions for RNA: ENST00000436282.1

TOP3B-206, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 2,890 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-206ENST00000436282 ZNF592Q92610 1267 aa17.54■□□□□ 0.4
TOP3B-206ENST00000436282 ZNF496Q96IT1 587 aaPredicted RBP17.54■□□□□ 0.4
TOP3B-206ENST00000436282 CCDC8Q9H0W5 538 aaPredicted RBP17.54■□□□□ 0.4
TOP3B-206ENST00000436282 TAF6LQ9Y6J9 622 aa17.54■□□□□ 0.4
TOP3B-206ENST00000436282 ADAMTSL3P82987 1691 aa17.54■□□□□ 0.4
TOP3B-206ENST00000436282 HEG1Q9ULI3 1381 aa17.54■□□□□ 0.4
TOP3B-206ENST00000436282 PHKG2P15735 406 aa17.54■□□□□ 0.4
TOP3B-206ENST00000436282 G3BP1Q13283 466 aaKnown RBP eCLIP17.54■□□□□ 0.4
TOP3B-206ENST00000436282 NYAP1Q6ZVC0 841 aa17.54■□□□□ 0.4
TOP3B-206ENST00000436282 COPS6Q7L5N1 327 aa17.54■□□□□ 0.4
TOP3B-206ENST00000436282 GTF3C6Q969F1 213 aa17.54■□□□□ 0.4
TOP3B-206ENST00000436282 FSD1Q9BTV5 496 aa17.54■□□□□ 0.4
TOP3B-206ENST00000436282 TMEM94Q12767 1356 aa17.54■□□□□ 0.4
TOP3B-206ENST00000436282 EAF2Q96CJ1 260 aaPredicted RBP17.54■□□□□ 0.4
TOP3B-206ENST00000436282 KAZALD1Q96I82 304 aa17.54■□□□□ 0.4
TOP3B-206ENST00000436282 ZSCAN16Q9H4T2 348 aaPredicted RBP17.54■□□□□ 0.4
TOP3B-206ENST00000436282 CFAP45Q9UL16 551 aa17.54■□□□□ 0.4
TOP3B-206ENST00000436282 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.54■□□□□ 0.4
TOP3B-206ENST00000436282 CTAGE5O15320 804 aa17.53■□□□□ 0.4
TOP3B-206ENST00000436282 SASH1O94885 1247 aa17.53■□□□□ 0.4
TOP3B-206ENST00000436282 IGKV5-2P06315 115 aa17.53■□□□□ 0.4
TOP3B-206ENST00000436282 PTPN14Q15678 1187 aa17.53■□□□□ 0.4
TOP3B-206ENST00000436282 STX1AQ16623 288 aa17.53■□□□□ 0.4
TOP3B-206ENST00000436282 BRF1Q92994 677 aa17.53■□□□□ 0.4
TOP3B-206ENST00000436282 MYD88Q99836 296 aa17.53■□□□□ 0.4
TOP3B-206ENST00000436282 JAK2O60674 1132 aa17.53■□□□□ 0.4
TOP3B-206ENST00000436282 NEXNQ0ZGT2 675 aa17.53■□□□□ 0.4
TOP3B-206ENST00000436282 C11orf57Q6ZUT1 292 aaPredicted RBP17.53■□□□□ 0.4
TOP3B-206ENST00000436282 USP27XA6NNY8 438 aa17.52■□□□□ 0.4
TOP3B-206ENST00000436282 SLFN14P0C7P3 912 aa17.52■□□□□ 0.4
TOP3B-206ENST00000436282 KRT32Q14532 448 aa17.52■□□□□ 0.4
TOP3B-206ENST00000436282 TTC5Q8N0Z6 440 aa17.52■□□□□ 0.4
TOP3B-206ENST00000436282 USP16Q9Y5T5 823 aa17.52■□□□□ 0.4
TOP3B-206ENST00000436282 MYH15Q9Y2K3 1946 aa17.52■□□□□ 0.39
TOP3B-206ENST00000436282 IFNL2Q8IZJ0 200 aa17.52■□□□□ 0.39
TOP3B-206ENST00000436282 ZNF215Q9UL58 517 aaPredicted RBP17.52■□□□□ 0.39
TOP3B-206ENST00000436282 H3BQV1 296 aa17.51■□□□□ 0.39
TOP3B-206ENST00000436282 SKILP12757 684 aa17.51■□□□□ 0.39
TOP3B-206ENST00000436282 ARID5BQ14865 1188 aa17.51■□□□□ 0.39
TOP3B-206ENST00000436282 IFFO2Q5TF58 517 aa17.51■□□□□ 0.39
TOP3B-206ENST00000436282 KRT222Q8N1A0 295 aa17.51■□□□□ 0.39
TOP3B-206ENST00000436282 PHRF1Q9P1Y6 1649 aaKnown RBP17.51■□□□□ 0.39
TOP3B-206ENST00000436282 BOLA2Q9H3K6 86 aa17.51■□□□□ 0.39
TOP3B-206ENST00000436282 KMT5BQ4FZB7 885 aa17.5■□□□□ 0.39
TOP3B-206ENST00000436282 USPL1Q5W0Q7 1092 aa17.5■□□□□ 0.39
TOP3B-206ENST00000436282 ZNF589Q86UQ0 364 aaPredicted RBP17.5■□□□□ 0.39
TOP3B-206ENST00000436282 ERO1AQ96HE7 468 aa17.5■□□□□ 0.39
TOP3B-206ENST00000436282 OVOS2A0A0G2JMS6 1433 aa17.5■□□□□ 0.39
TOP3B-206ENST00000436282 KDM6AO15550 1401 aaPredicted RBP17.5■□□□□ 0.39
TOP3B-206ENST00000436282 CCDC69A6NI79 296 aa17.5■□□□□ 0.39
TOP3B-206ENST00000436282 CCZ1BP86790 482 aa17.5■□□□□ 0.39
TOP3B-206ENST00000436282 CCZ1P86791 482 aaPredicted RBP17.5■□□□□ 0.39
TOP3B-206ENST00000436282 KCND1Q9NSA2 647 aa17.5■□□□□ 0.39
TOP3B-206ENST00000436282 TLR7Q9NYK1 1049 aaKnown RBP17.5■□□□□ 0.39
TOP3B-206ENST00000436282 RGPD5Q99666 1765 aa17.5■□□□□ 0.39
TOP3B-206ENST00000436282 TAF5LO75529 589 aa17.5■□□□□ 0.39
TOP3B-206ENST00000436282 NEURL1BA8MQ27 555 aa17.49■□□□□ 0.39
TOP3B-206ENST00000436282 BECN2A8MW95 431 aa17.49■□□□□ 0.39
TOP3B-206ENST00000436282 CYP27B1O15528 508 aa17.49■□□□□ 0.39
TOP3B-206ENST00000436282 SLFNL1Q499Z3 407 aa17.49■□□□□ 0.39
TOP3B-206ENST00000436282 EPHA10Q5JZY3 1008 aa17.49■□□□□ 0.39
TOP3B-206ENST00000436282 DDX11Q96FC9 970 aa17.49■□□□□ 0.39
TOP3B-206ENST00000436282 NEK1Q96PY6 1258 aa17.49■□□□□ 0.39
TOP3B-206ENST00000436282 FAM53CQ9NYF3 392 aa17.49■□□□□ 0.39
TOP3B-206ENST00000436282 MEGF6O75095 1541 aa17.49■□□□□ 0.39
TOP3B-206ENST00000436282 TERF2Q15554 542 aa17.48■□□□□ 0.39
TOP3B-206ENST00000436282 CCAR1Q8IX12 1150 aaKnown RBP17.48■□□□□ 0.39
TOP3B-206ENST00000436282 CCAR2Q8N163 923 aaKnown RBP17.48■□□□□ 0.39
TOP3B-206ENST00000436282 RCOR1Q9UKL0 485 aa17.48■□□□□ 0.39
TOP3B-206ENST00000436282 TRPM3Q9HCF6 1732 aaPredicted RBP17.48■□□□□ 0.39
TOP3B-206ENST00000436282 ATP5J2-PTCD1G3V325 749 aa17.48■□□□□ 0.39
TOP3B-206ENST00000436282 KIF2AO00139 706 aaPredicted RBP17.48■□□□□ 0.39
TOP3B-206ENST00000436282 PTCD1O75127 700 aaKnown RBP17.48■□□□□ 0.39
TOP3B-206ENST00000436282 GCKRQ14397 625 aa17.48■□□□□ 0.39
TOP3B-206ENST00000436282 ANKRD13DQ6ZTN6 518 aa17.48■□□□□ 0.39
TOP3B-206ENST00000436282 ANO10Q9NW15 660 aa17.48■□□□□ 0.39
TOP3B-206ENST00000436282 UTYO14607 1347 aa17.48■□□□□ 0.39
TOP3B-206ENST00000436282 ADD1P35611 737 aaKnown RBP17.47■□□□□ 0.39
TOP3B-206ENST00000436282 HSPA2P54652 639 aa17.47■□□□□ 0.39
TOP3B-206ENST00000436282 CABP4P57796 275 aa17.47■□□□□ 0.39
TOP3B-206ENST00000436282 DHX40Q8IX18 779 aaKnown RBP17.47■□□□□ 0.39
TOP3B-206ENST00000436282 SNRPA1P09661 255 aaKnown RBP17.47■□□□□ 0.39
TOP3B-206ENST00000436282 HSP90B1P14625 803 aaKnown RBP17.47■□□□□ 0.39
TOP3B-206ENST00000436282 CCDC73Q6ZRK6 1079 aa17.47■□□□□ 0.39
TOP3B-206ENST00000436282 Q6ZUG5 572 aa17.47■□□□□ 0.39
TOP3B-206ENST00000436282 FILIP1Q7Z7B0 1213 aa17.47■□□□□ 0.39
TOP3B-206ENST00000436282 SMARCC2Q8TAQ2 1214 aa17.47■□□□□ 0.39
TOP3B-206ENST00000436282 MST1RQ04912 1400 aa17.47■□□□□ 0.39
TOP3B-206ENST00000436282 MRC1P22897 1456 aa17.47■□□□□ 0.39
TOP3B-206ENST00000436282 SLU7O95391 586 aaKnown RBP17.46■□□□□ 0.39
TOP3B-206ENST00000436282 FBXO38Q6PIJ6 1188 aa17.46■□□□□ 0.39
TOP3B-206ENST00000436282 LLPHQ9BRT6 129 aaKnown RBP17.46■□□□□ 0.39
TOP3B-206ENST00000436282 METTL22Q9BUU2 404 aaPredicted RBP17.46■□□□□ 0.39
TOP3B-206ENST00000436282 GOLPH3LQ9H4A5 285 aa17.46■□□□□ 0.39
TOP3B-206ENST00000436282 GSDMDP57764 484 aa17.46■□□□□ 0.39
TOP3B-206ENST00000436282 CEBPZQ03701 1054 aaKnown RBP17.46■□□□□ 0.39
TOP3B-206ENST00000436282 NAA16Q6N069 864 aaPredicted RBP17.46■□□□□ 0.39
TOP3B-206ENST00000436282 DCAF5Q96JK2 942 aa17.46■□□□□ 0.39
TOP3B-206ENST00000436282 KINO60870 393 aaKnown RBP17.46■□□□□ 0.38
TOP3B-206ENST00000436282 SNW1Q13573 536 aaKnown RBP17.46■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms