RNA–Protein interactions for RNA: ENST00000435497.1

LINC00028-201, long intergenic non-protein coding RNA 28, humanhuman

TSL 2 BASIC

Gene LINC00028, Length 587 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00028-201ENST00000435497 DUSP27Q5VZP5 1158 aa17.71■□□□□ 0.43
LINC00028-201ENST00000435497 HYPKQ9NX55 129 aa17.71■□□□□ 0.43
LINC00028-201ENST00000435497 ADM5C9JUS6 153 aa17.7■□□□□ 0.42
LINC00028-201ENST00000435497 VIL1P09327 827 aaKnown RBP17.7■□□□□ 0.42
LINC00028-201ENST00000435497 RGMBQ6NW40 437 aa17.7■□□□□ 0.42
LINC00028-201ENST00000435497 CFAP44Q96MT7 982 aa17.7■□□□□ 0.42
LINC00028-201ENST00000435497 GBA2Q9HCG7 927 aaPredicted RBP17.7■□□□□ 0.42
LINC00028-201ENST00000435497 SEC31BQ9NQW1 1179 aa17.7■□□□□ 0.42
LINC00028-201ENST00000435497 ADAMTS8Q9UP79 889 aa17.7■□□□□ 0.42
LINC00028-201ENST00000435497 SLC34A2O95436 690 aa17.69■□□□□ 0.42
LINC00028-201ENST00000435497 DGKZQ13574 1117 aa17.69■□□□□ 0.42
LINC00028-201ENST00000435497 EYA3Q99504 573 aa17.69■□□□□ 0.42
LINC00028-201ENST00000435497 PODXL2Q9NZ53 605 aa17.69■□□□□ 0.42
LINC00028-201ENST00000435497 ASTN2O75129 1339 aaPredicted RBP17.69■□□□□ 0.42
LINC00028-201ENST00000435497 MYBBP1AQ9BQG0 1328 aaKnown RBP17.69■□□□□ 0.42
LINC00028-201ENST00000435497 ZNF853P0CG23 659 aa17.68■□□□□ 0.42
LINC00028-201ENST00000435497 C2orf69Q8N8R5 385 aa17.68■□□□□ 0.42
LINC00028-201ENST00000435497 ZBTB38Q8NAP3 1195 aaPredicted RBP17.68■□□□□ 0.42
LINC00028-201ENST00000435497 DCPSQ96C86 337 aaKnown RBP17.68■□□□□ 0.42
LINC00028-201ENST00000435497 PHAXQ9H814 394 aaKnown RBP17.68■□□□□ 0.42
LINC00028-201ENST00000435497 MBIPQ9NS73 344 aa17.68■□□□□ 0.42
LINC00028-201ENST00000435497 KIF23Q02241 960 aaPredicted RBP17.67■□□□□ 0.42
LINC00028-201ENST00000435497 DDX10Q13206 875 aaKnown RBP17.67■□□□□ 0.42
LINC00028-201ENST00000435497 KIF4BQ2VIQ3 1234 aa17.67■□□□□ 0.42
LINC00028-201ENST00000435497 ZC3H12CQ9C0D7 883 aaKnown RBP17.67■□□□□ 0.42
LINC00028-201ENST00000435497 RIC3Q7Z5B4 369 aa17.66■□□□□ 0.42
LINC00028-201ENST00000435497 JARID2Q92833 1246 aaPredicted RBP17.66■□□□□ 0.42
LINC00028-201ENST00000435497 CCDC102AQ96A19 550 aa17.66■□□□□ 0.42
LINC00028-201ENST00000435497 UFL1O94874 794 aa17.65■□□□□ 0.42
LINC00028-201ENST00000435497 ZNF157P51786 506 aaPredicted RBP17.65■□□□□ 0.42
LINC00028-201ENST00000435497 WDR43Q15061 677 aaKnown RBP eCLIP17.65■□□□□ 0.42
LINC00028-201ENST00000435497 GGA3Q9NZ52 723 aa17.65■□□□□ 0.42
LINC00028-201ENST00000435497 ELL2O00472 640 aaPredicted RBP17.64■□□□□ 0.41
LINC00028-201ENST00000435497 ZNF280AP59817 542 aaPredicted RBP17.64■□□□□ 0.41
LINC00028-201ENST00000435497 CSRNP1Q96S65 589 aa17.64■□□□□ 0.41
LINC00028-201ENST00000435497 GMLQ99445 158 aa17.64■□□□□ 0.41
LINC00028-201ENST00000435497 MYD88Q99836 296 aa17.64■□□□□ 0.41
LINC00028-201ENST00000435497 RNF186Q9NXI6 227 aa17.64■□□□□ 0.41
LINC00028-201ENST00000435497 ANKIB1Q9P2G1 1089 aa17.64■□□□□ 0.41
LINC00028-201ENST00000435497 GGA1Q9UJY5 639 aa17.64■□□□□ 0.41
LINC00028-201ENST00000435497 TRPA1O75762 1119 aa17.63■□□□□ 0.41
LINC00028-201ENST00000435497 PCCAP05165 728 aaPredicted RBP17.63■□□□□ 0.41
LINC00028-201ENST00000435497 SLC10A3P09131 477 aa17.63■□□□□ 0.41
LINC00028-201ENST00000435497 SCARF1Q14162 830 aa17.63■□□□□ 0.41
LINC00028-201ENST00000435497 RSBN1LQ6PCB5 846 aaPredicted RBP17.63■□□□□ 0.41
LINC00028-201ENST00000435497 SULF1Q8IWU6 871 aa17.63■□□□□ 0.41
LINC00028-201ENST00000435497 CCDC191Q8NCU4 936 aa17.63■□□□□ 0.41
LINC00028-201ENST00000435497 CDCA5Q96FF9 252 aa17.63■□□□□ 0.41
LINC00028-201ENST00000435497 SAGE1Q9NXZ1 904 aa17.63■□□□□ 0.41
LINC00028-201ENST00000435497 AKAP11Q9UKA4 1901 aa17.62■□□□□ 0.41
LINC00028-201ENST00000435497 WTIPA6NIX2 430 aaPredicted RBP17.62■□□□□ 0.41
LINC00028-201ENST00000435497 PDE8AO60658 829 aa17.62■□□□□ 0.41
LINC00028-201ENST00000435497 GOLGA2Q08379 1002 aa17.62■□□□□ 0.41
LINC00028-201ENST00000435497 AGBL3Q8NEM8 1001 aa17.62■□□□□ 0.41
LINC00028-201ENST00000435497 CCDC85AQ96PX6 553 aaPredicted RBP17.62■□□□□ 0.41
LINC00028-201ENST00000435497 PDE4DIPQ5VU43 2346 aa17.62■□□□□ 0.41
LINC00028-201ENST00000435497 TNRC18O15417 2968 aaPredicted RBP17.61■□□□□ 0.41
LINC00028-201ENST00000435497 G3V3G9 751 aa17.61■□□□□ 0.41
LINC00028-201ENST00000435497 CCDC152Q4G0S7 254 aa17.61■□□□□ 0.41
LINC00028-201ENST00000435497 DCAF8Q5TAQ9 597 aa17.61■□□□□ 0.41
LINC00028-201ENST00000435497 ANGEL2Q5VTE6 544 aaKnown RBP17.61■□□□□ 0.41
LINC00028-201ENST00000435497 C8orf58Q8NAV2 365 aa17.61■□□□□ 0.41
LINC00028-201ENST00000435497 ZNF609O15014 1411 aa17.61■□□□□ 0.41
LINC00028-201ENST00000435497 PSME4Q14997 1843 aa17.61■□□□□ 0.41
LINC00028-201ENST00000435497 APAF1O14727 1248 aa17.6■□□□□ 0.41
LINC00028-201ENST00000435497 HSP90B1P14625 803 aaKnown RBP17.6■□□□□ 0.41
LINC00028-201ENST00000435497 METTL22Q9BUU2 404 aaPredicted RBP17.6■□□□□ 0.41
LINC00028-201ENST00000435497 IFT57Q9NWB7 429 aa17.6■□□□□ 0.41
LINC00028-201ENST00000435497 CWC25Q9NXE8 425 aaPredicted RBP17.6■□□□□ 0.41
LINC00028-201ENST00000435497 XDHP47989 1333 aa17.59■□□□□ 0.41
LINC00028-201ENST00000435497 RASAL3Q86YV0 1011 aa17.59■□□□□ 0.41
LINC00028-201ENST00000435497 SCAF8Q9UPN6 1271 aaKnown RBP17.59■□□□□ 0.41
LINC00028-201ENST00000435497 USP17L8P0C7I0 530 aa17.58■□□□□ 0.4
LINC00028-201ENST00000435497 GNAI1P63096 354 aa17.58■□□□□ 0.4
LINC00028-201ENST00000435497 MOB2Q70IA6 237 aa17.58■□□□□ 0.4
LINC00028-201ENST00000435497 ANKRD18AQ8IVF6 992 aa17.58■□□□□ 0.4
LINC00028-201ENST00000435497 MYOZ2Q9NPC6 264 aa17.58■□□□□ 0.4
LINC00028-201ENST00000435497 USP17L3A6NCW0 530 aa17.57■□□□□ 0.4
LINC00028-201ENST00000435497 USP17L4A6NCW7 530 aa17.57■□□□□ 0.4
LINC00028-201ENST00000435497 ATP2B4P23634 1241 aa17.57■□□□□ 0.4
LINC00028-201ENST00000435497 USP17L1Q7RTZ2 530 aa17.57■□□□□ 0.4
LINC00028-201ENST00000435497 PODNQ7Z5L7 613 aa17.57■□□□□ 0.4
LINC00028-201ENST00000435497 PITPNM2Q9BZ72 1349 aa17.56■□□□□ 0.4
LINC00028-201ENST00000435497 IGKV5-2P06315 115 aa17.56■□□□□ 0.4
LINC00028-201ENST00000435497 PRAMEF18Q5VWM3 479 aa17.56■□□□□ 0.4
LINC00028-201ENST00000435497 TSPYL6Q8N831 410 aa17.56■□□□□ 0.4
LINC00028-201ENST00000435497 TTLL11Q8NHH1 800 aa17.56■□□□□ 0.4
LINC00028-201ENST00000435497 MXD3Q9BW11 206 aa17.56■□□□□ 0.4
LINC00028-201ENST00000435497 MINPP1Q9UNW1 487 aa17.56■□□□□ 0.4
LINC00028-201ENST00000435497 MAP3K2Q9Y2U5 619 aa17.56■□□□□ 0.4
LINC00028-201ENST00000435497 FKBP1BP68106 108 aa17.55■□□□□ 0.4
LINC00028-201ENST00000435497 NBPF9Q3BBW0 867 aa17.55■□□□□ 0.4
LINC00028-201ENST00000435497 PRKRIP1Q9H875 184 aaPredicted RBP17.55■□□□□ 0.4
LINC00028-201ENST00000435497 UBE2Q2LH0YL09 131 aa17.54■□□□□ 0.4
LINC00028-201ENST00000435497 DDX58O95786 925 aaKnown RBP17.54■□□□□ 0.4
LINC00028-201ENST00000435497 CTSWP56202 376 aa17.54■□□□□ 0.4
LINC00028-201ENST00000435497 SOX10P56693 466 aa17.54■□□□□ 0.4
LINC00028-201ENST00000435497 CCDC30Q5VVM6 783 aa17.54■□□□□ 0.4
LINC00028-201ENST00000435497 KSR2Q6VAB6 950 aa17.54■□□□□ 0.4
LINC00028-201ENST00000435497 REM2Q8IYK8 340 aaPredicted RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms